Micromonas commoda: MICPUN_52080
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Entry
MICPUN_52080 CDS
T02695
Name
(RefSeq) predicted protein
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mis
Micromonas commoda
Pathway
mis04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
MICPUN_52080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mis04131
]
MICPUN_52080
Membrane trafficking [BR:
mis04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
MICPUN_52080
Hops complex
MICPUN_52080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_RING_Vps8_fungal
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
8248986
NCBI-ProteinID:
XP_002506263
JGI:
MicpuN3_52080
UniProt:
C1EHK5
LinkDB
All DBs
Position
14:complement(792749..794287)
Genome browser
AA seq
512 aa
AA seq
DB search
MPPDARLAHARAFFDLDPATAVDAFVADDELDPARLATEVFERLFVAGLDESTDPRGAVA
VGAARYLTHAVARGRGKVSIVDRRVHDLALRAFCRVYPADPSVLIGYVRDGAGTDWKTGE
PLYDCAVATDLCERVGAVEVVICVHCDRGDHDAALALAMATSDDLALAKSVLDRAGRRSR
SRFGASRRDIWRKIAAGVVARGFGAKVTEADVVEAADALRKYEETFGTRGGGEGADGDGD
VEEEERTDPKLVEEEERTDPKLGTSRRAAEAYAVSRACAASSSYGDPSVRKRVVDRIVSL
VEESDGELGVDDVLPLFPDFRVLDEWRDAVLNDLAARDGRVDAHVAAAAEARAKIDAAKR
TLEELRTREAVIGWDEPCARCGGSVSSPPFSFHSFASEGNDPDDVDERCDLPKLYVFPCG
MCFHATCLLESAVPRLGRRRRAEATALMDAIDVPLTFGLREMRRRLREKDGKAREGVVGD
GGPEREGADAVARLDEILRERCPFCGEVEFSG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgccaccggacgcgcgtctcgcgcacgcccgcgcgttcttcgacctcgacccggcgaca
gctgtggacgcgttcgtcgccgacgacgaactcgatcccgcgcggctggcgacggaagtt
ttcgagcgtttattcgtcgcgggtttagacgaatcgacggacccgcgcggcgccgtcgcg
gtcggggcggcgcgatacctgacgcacgcggtggctcgtggacgtggcaaggtgagtatc
gtcgatcgccgcgtccacgacctcgccctccgcgcgttctgccgtgtgtatccggcggat
ccgagtgtgctgattgggtacgttcgcgacggcgccgggacggattggaagacgggcgaa
cctctgtacgactgcgccgtggcgacggacctgtgcgaacgggtcggggcggtcgaggtg
gtgatatgcgtccactgcgaccgcggcgaccacgacgcggcgctcgcgctcgccatggcc
acgtcggacgacctcgcgctggccaagtcggttctggacagggcgggtcgtcggtcgcgg
tcgcggttcggagcgagccggcgagatatctggaggaagatcgccgccggggttgtggcg
aggggattcggcgcgaaggtgaccgaggcggacgtggtggaagccgcggatgcgctcagg
aagtacgaggagacgttcggaacacgcggcgggggcgagggcgcggatggggatggggac
gtcgaggaggaggagcggacggatccaaagttggtcgaggaggaggagcggacggatcca
aagttgggaacgtcgcgccgcgccgccgaggcgtacgcggtgtcccgcgcgtgcgccgcg
tcgagttcgtacggggacccgtccgttcgtaagcgggtcgtggaccgaatcgtctcgctc
gtggaggaatccgacggcgagctcggcgtggacgacgtcctcccgttgttccccgacttt
cgcgtcttggacgagtggcgcgacgcggtgttgaacgatctcgcggcgagggacgggcgg
gtggacgcgcacgtcgccgccgccgccgaggccagggccaagattgacgccgccaagagg
acgctcgaggagctgcggacgcgcgaagcggtgattggatgggacgagccgtgcgcccga
tgcggcgggtccgtgtcgtcgccgccgttttcgtttcattcgttcgcgtccgaggggaac
gaccccgacgatgtggacgagcggtgcgatctgcccaagctgtacgtgttcccctgcggc
atgtgctttcacgcgacgtgtctgttggagtccgccgtgccgcggctgggtcggcggagg
agggcggaggcgacggcgctcatggacgcgatcgacgttccgctcacgtttggtctcagg
gagatgcgacggaggttgagggagaaggatgggaaggcgagggagggggtcgtcggcgac
ggtggccccgagcgcgagggcgcggatgcggtcgcgaggttagacgagatcctgcgcgag
cggtgtccgttctgcggcgaggttgagtttagcggatag
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