Micromonas commoda: MICPUN_54596
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Entry
MICPUN_54596 CDS
T02695
Name
(RefSeq) predicted protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
mis
Micromonas commoda
Pathway
mis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MICPUN_54596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_54596
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
MICPUN_54596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
BHD_1
BHD_2
LPP
Motif
Other DBs
NCBI-GeneID:
8248341
NCBI-ProteinID:
XP_002505661
JGI:
MicpuN3_54596
UniProt:
C1EFW1
LinkDB
All DBs
Position
13:complement(151694..153136)
Genome browser
AA seq
480 aa
AA seq
DB search
MPYVFGFRSRLVVAFGSAEFGSLADRHAVESGYRWGAKDLTRKYAETFSKVGPHRVDESW
LRSTTSTMAAGDRAVDEFRAADDVQSSDRPRLLEVSALARGACRAEDVHMDAKCLTERVP
SSFAELRNHPLWAVERFLTKTQCIHPRFPVKGFIQGECVFPRSCVRELRSAERWKAECRR
IVLVSELQKPAKRMHSRIQAARARVQKAKKDAERIDAARRGRGKNGGHPPRRKGSRSVEE
VAAAMSKRENGLGANGNPGGGVNGEEEEEEEEEGEVFLYGEWQTEPWDPPAAKDGVVPKN
DRGNVDLHGAALPPPGTVHVNLPRIARVARALGIDYASALVGFEFHRGGKTTPKFEGVVV
CEEFEGRLREAHAEEEARLVAAKAERERREAKARWRVLFSAMWTRLSLREEFAMDDGDDN
GDGGGEPDEREKTRLEEETVDRERRGGGKRARLGADEEDGENDGGTKRVRLGAAAEVEEL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgtgtttggattcaggtcgaggctcgtcgtcgcgtttggatcggccgagttt
ggatcgttagccgaccgtcacgcggtagagtctgggtaccgctggggcgcgaaggacctg
acgcgaaagtacgcggagacgttcagcaaagtcggtccgcacagggtggacgaatcgtgg
ctgcggtcgacgacgtcgacgatggcggcgggcgatcgcgccgtggacgagtttcgcgcg
gcggacgacgttcaatcgtcggacagaccgcggcttctggaagtttccgcgttggcgcgt
ggcgcgtgtcgagctgaggacgttcacatggacgccaagtgcctcaccgagcgcgtcccg
tcgtcgttcgccgagcttcgaaaccatccgctgtgggcggtggagcggttcctgaccaag
acgcagtgcattcacccgcgatttccggtgaagggtttcatccagggcgagtgcgtgttt
cccaggtcctgcgtcagggagctgaggagcgccgagcggtggaaggcggagtgccggcgg
atcgtgctcgtctccgagctccagaagccggcgaagcgaatgcactcccgaatccaggcg
gcgagggcgagggtgcaaaaggcgaaaaaagacgccgagcggatcgacgccgcgcggcgg
ggacggggaaagaatgggggccacccgccccggcgcaagggctcaaggtccgtcgaggag
gtcgctgcggccatgtccaaacgcgagaacggcctcggcgcgaacggcaacccggggggc
ggggtgaacggggaggaggaggaggaggaggaggaggagggcgaggtgtttctttacggc
gagtggcagacggagccgtgggatccgccagccgcgaaggacggcgtggtgcccaagaac
gaccgcggaaacgtggacctccacggcgccgctttacctcccccggggacggttcacgtc
aacctgccgaggatcgcgagggtcgccagggcgctcgggatcgattacgcgtcggcgctc
gtgggtttcgagtttcaccggggcggtaagacgacgcccaagtttgaaggcgtcgtcgtc
tgcgaagagttcgagggtaggctacgcgaggcccacgcggaggaggaggcgcggttggtc
gcggcgaaggcggagagggagaggcgcgaggcgaaggcgcggtggagggtgctgttcagc
gcgatgtggacgcggctgagtctccgagaggagttcgcgatggacgacggggacgacaat
ggggacgggggcggcgagccggacgagagggagaagacgcgtctcgaggaggagacggtc
gatcgcgaacggcggggaggcgggaagcgggcgcggttgggcgcggacgaggaggatggg
gaaaacgacgggggaacgaagcgggttcggctcggcgccgccgccgaggtggaggagttg
tga
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