Micromonas commoda: MICPUN_54938
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Entry
MICPUN_54938 CDS
T02695
Symbol
RFC2
Name
(RefSeq) replication factor c, subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
mis
Micromonas commoda
Pathway
mis03030
DNA replication
mis03410
Base excision repair
mis03420
Nucleotide excision repair
mis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MICPUN_54938 (RFC2)
03410 Base excision repair
MICPUN_54938 (RFC2)
03420 Nucleotide excision repair
MICPUN_54938 (RFC2)
03430 Mismatch repair
MICPUN_54938 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mis03032
]
MICPUN_54938 (RFC2)
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_54938 (RFC2)
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_54938 (RFC2)
DNA replication proteins [BR:
mis03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
MICPUN_54938 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
MICPUN_54938 (RFC2)
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
MICPUN_54938 (RFC2)
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
MICPUN_54938 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
MICPUN_54938 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
Mg_chelatase
AAA_14
AAA_22
AAA_16
nSTAND3
RuvB_N
AAA_5
IstB_IS21
RCF1-5-like_lid
MeaB
AAA_19
AAA_11
AAA_24
DNAX_ATPase_lid
ABC_tran
NTPase_1
Viral_helicase1
AAA_assoc_2
AAA_3
AAA_28
AAA_25
Motif
Other DBs
NCBI-GeneID:
8250025
NCBI-ProteinID:
XP_002507483
JGI:
MicpuN3_54938
UniProt:
C1FD83
LinkDB
All DBs
Position
1:complement(364438..365442)
Genome browser
AA seq
334 aa
AA seq
DB search
MNGAQAVASLPWVEKYRPTKIDDIVGNKDAVDRLTAIASTGNMPNLIFTGPPGIGKTTSV
LCLAHTLLGPSYKDAVLELNASDDRGIDAVRNKIKMFAQKKVTLPPGRHKIILLDEADSM
TSAAQQALRRTMELYSSTTRFALACNASEKIIEPIQSRCAIVRFTRLSDQEVLERIVKVV
EREEVPYVPDGLEAVVFTADGDMRQALNNVQATHSGFGFVNQENVFKVCDQPHPQIVVDC
VACCLRGDVDHAHDKMKSLHDAGFSAADVIGTVYRVVKNFDAESMPEFVKLEMIREVGFT
HMRIGDGVNSLLQLGGMCAKMCQVVERAKTGVMR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgcccaggccgttgcttcgttgccttgggtggagaaataccgcccaaccaag
atcgacgacatcgtcgggaacaaggatgcagttgatcgtcttaccgctatagcttctacc
ggcaatatgcccaacctcatcttcaccggtccacccggcatcggaaagacaacgtccgtc
ctctgcctcgcgcacacgcttctgggcccttcatacaaggacgcggtcctcgagctgaac
gcatccgacgaccgtggtatcgacgcggtgcgcaataagataaaaatgttcgctcagaag
aaggttaccctccctcccggccgacataagattatcctgctcgacgaggctgactccatg
acaagtgctgcgcagcaggcgttgcgaaggaccatggagctctattcgtctaccactcgc
ttcgcacttgcgtgcaatgcctccgaaaagattatcgaacctatccaatcgcgctgtgcg
atcgttcgatttactcgtctcagtgatcaagaggtgcttgagcggattgtcaaggtggtc
gaaagggaagaggttccgtatgtccctgacggcctggaggctgtcgtcttcactgcagac
ggtgacatgcgccaagcactaaataacgttcaggccacgcactcggggtttggctttgtg
aaccaagaaaatgttttcaaggtgtgcgatcagccgcatccccagatcgttgtcgactgt
gtcgcgtgttgcctcaggggtgatgtcgaccacgctcacgacaagatgaagtccttgcat
gacgccggattcagcgccgcagacgtcattggcaccgtgtacagggttgtaaagaacttt
gacgcggagagtatgcctgaatttgtcaagctcgaaatgatccgcgaggtgggcttcacg
cacatgaggataggagacggcgtaaactctctgcttcagctggggggcatgtgtgcaaag
atgtgccaagtggtggagcgcgccaagactggagtgatgcgctga
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