Micromonas commoda: MICPUN_55256
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Entry
MICPUN_55256 CDS
T02695
Name
(RefSeq) predicted protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
mis
Micromonas commoda
Pathway
mis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MICPUN_55256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_55256
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MICPUN_55256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Ribosomal_S30AE
Motif
Other DBs
NCBI-GeneID:
8250151
NCBI-ProteinID:
XP_002507226
JGI:
MicpuN3_55256
UniProt:
C1FE08
LinkDB
All DBs
Position
1:join(1147681..1147717,1147817..1150671)
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AA seq
963 aa
AA seq
DB search
MCTLSEKCSALDESDRKGFVAFYRSLPADPKIIRIFSRKDNYSVHGDNAVLIARTFLKTT
TALHYLGHGESALPGLTLNRNLFESILRELLLDRTEHLVELYEETSRQVWKLSRTASPGK
LDAFEEELNRSDDLFDTPAVAAVQVKVRMDQQHVGFAYFNPVTRHFGACEFVDDDQLRIL
EATICQLGIKECVLQLQAIETPNGRRLRDLISRCGALASQRATSDFDINHLEHDLSCLLA
HEASENIRTVNVVNAPNAAALEHHRAILTKELAAGALAATLRFSDALADSNHRGRCTLAL
HDTGKYVRLDSSALSALNVLPERRVLSPSTASAAADAISNFSLYDLLNKCRCPMGRRMLF
RWLKQPLLDTVEIGRRHDVVEAFVNNPEVRDALRGTHLRALPDIHRITRRIERRRANLAD
LCKLYQASAALPYIAGAVSQIDTCHSRALRDMYTDKLIKLSDNDHLGKYEALIEAAIDLN
KIPEEYVIDASYDLDLEILQKRKDAANEDLQKAFQDAADDLRMQAGKALKLESNNMYGWY
LRLTKKDETTVRRQLSASYQILEAKKDGTKFTNKRLHSLSSKCMELDKAYECQQRVLVDR
VVDVAASFVDVFLEVSNLCAEIDVLASFAEVAVSAPLPFTRPSVHPKQSNADSIREEIIL
KDSRHPCMELQHGVQFVSNTCTLQRGKSWFQLITGPNMGGKSTFIRQVGICVLMAQVGSF
VPCAEAKIAVRDAIYARVGAGDSQLRGISTFMAEMLETTAIIKAATPSSLIIIDELGRGT
STYDGFGVAWAISEYIMRNVKAPCLFATHFHELTALQGPLGVTNYHVDAEIDERSGKLTM
LYCVSPGVSDQSFGIECAEYAKFPEQVIKNAREKALELEDFSAKATAFAASKNTCLEASL
LGMKRSSSDHRLRDTAGRAVVSQTLTATLFLDSFCTVHLDKLSKEDIFHHTKRMKKELVL
VAR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacgttaagcgagaaatgtagcgctcttgacgaaagcgacaggaaaggattcgtc
gctttctaccgatcgctacctgctgatccgaagattatccgtattttcagtcggaaggac
aactactcggttcacggtgacaacgcggtcctgatcgcgcgaacctttttgaaaacaact
accgccttacactacctcggacacggtgaatccgctcttcccgggttgacactgaaccgc
aacctatttgaaagcatactgcgcgagctattgttggatcgaactgaacatctggtcgaa
ctttatgaagagacttcccgccaagtttggaaactttctcggacggcttcaccagggaag
ctggacgcatttgaggaagagctcaatcgttcggatgatctatttgacacacctgcagtg
gctgctgttcaagttaaggttcgaatggatcagcaacatgtcggattcgcctactttaat
ccagtgacgcggcatttcggtgcttgtgagtttgtggacgatgatcagctgcgcatactt
gaggcaaccatctgtcagctaggcataaaggagtgcgtgctccaacttcaggccattgag
acccccaacggtcgccggctgagagacctcatcagccgatgtggtgccctggcctcacaa
cgcgcaacatcagactttgacattaatcatcttgagcacgacctttcatgtttactcgca
catgaggcttcggagaatataagaacagtaaacgtagtgaatgcgccaaatgccgcggcc
ctcgaacatcaccgggctattctaacaaaagaattagcagctggcgcactcgctgctaca
ctgcgattctccgatgctcttgctgattcgaatcatcgtggacgttgcacactggctttg
cacgacacaggaaagtatgttaggcttgattcttccgctttgagcgcactaaacgtactc
ccagaaaggagggttctgtctccgtctacagcaagtgctgctgcggatgcgataagtaat
ttcagtttgtatgatctgctaaataaatgtcgatgtccgatggggaggcgtatgctgttc
cgatggttgaagcagccactgctggataccgttgaaatagggcgaagacatgatgtcgtg
gaagccttcgtcaacaatcccgaagtgcgagacgctttgcgagggacgcatctcagggca
cttccagatatccacaggataactcgtagaatcgagcgtcgccgtgcaaacttggcagat
ttatgtaagctgtatcaagcatcagcagctttgccgtatatagctggggctgtgagtcaa
attgatacttgtcacagtcgtgcattgagagacatgtacactgataaactcatcaagctt
agtgataatgatcaccttggaaagtacgaggctttaattgaggccgctatagatctgaac
aaaattcctgaggaatacgttattgatgcgtcatatgatctcgatcttgaaattttgcag
aagcgtaaggatgccgccaacgaggatttgcaaaaggccttccaggatgccgctgacgac
ttgagaatgcaagcaggcaaggcccttaaattggaaagcaataacatgtatggatggtac
ttgcggttgacaaagaaagacgagaccacggtcaggaggcaactctcagccagctatcag
atcttagaggctaagaaggatggcaccaaattcacaaataagcggcttcattctctcagc
tccaaatgcatggaactggacaaagcttacgaatgtcagcaacgcgttcttgtggatcga
gttgttgatgtcgcggcctcttttgtagatgtattcctggaggtcagtaacttgtgtgca
gaaattgacgttctagcaagctttgccgaggtcgctgtttcagctccattaccatttacc
cggccatctgtccatccgaaacaatcaaatgctgatagtattcgcgaagaaatcatccta
aaagacagccggcatccttgcatggaattgcagcacggcgttcagtttgtttcaaatact
tgcactctacagcgcggcaaaagctggtttcaactaatcacaggccctaatatgggtgga
aagtccacttttatccgccaagttggtatctgtgtgctgatggctcaggttgggtccttt
gtgccatgtgccgaggcaaagattgctgttcgcgatgctatttacgctcgggtgggtgca
ggcgatagtcagttgcgtgggatttcaacgttcatggcagagatgctcgaaaccacggcg
atcatcaaagctgctaccccatcctccctaatcatcattgacgaacttggtcgtggaact
tctacctatgatggctttggtgttgcctgggccatctcggagtatattatgagaaatgtg
aaggcgccctgtctttttgccacgcattttcacgagctcaccgctctccaaggacctttg
ggcgtcactaattatcacgtggatgctgaaattgatgaaagaagtggcaaactcacaatg
ctgtactgcgtttcaccaggtgtttcggaccaatctttcggcattgagtgtgcagaatat
gcaaaatttcctgagcaagttattaaaaatgcgagagaaaaggctttagaactcgaagat
ttttctgcaaaggcaactgcgttcgcagcctcgaaaaatacgtgtctggaagcaagtcta
cttggaatgaaaagatcgtcgtctgatcatagattgcgcgacactgcagggcgcgctgtt
gtctcgcagaccttgacagctacgctatttcttgacagtttttgcacagtccacctcgat
aaactttcgaaagaagatatatttcatcacacgaagcgcatgaaaaaggagctggtgctg
gtagcacgatag
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