Micromonas commoda: MICPUN_55463
Help
Entry
MICPUN_55463 CDS
T02695
Name
(RefSeq) translation initiation factor
KO
K03243
translation initiation factor 5B
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mis03012
]
MICPUN_55463
Translation factors [BR:
mis03012
]
Eukaryotic type
Initiation factors
eIF-5
MICPUN_55463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
tRNA_bind
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
ATP_bind_1
Roc
AAA_22
Motif
Other DBs
NCBI-GeneID:
8250245
NCBI-ProteinID:
XP_002507320
JGI:
MicpuN3_55463
UniProt:
C1FEJ3
LinkDB
All DBs
Position
1:1675366..1679943
Genome browser
AA seq
1525 aa
AA seq
DB search
MGRKGSANGTSRASGLVNGPDFSDAVKESETAMFGRPKKLKKGRNRRDQSSDEDTAPLAA
AKRPAATVSEEFDGATEKSFINQTRSQKRKQKKERKDIGGKGRTFHGSDDDDVLTLAALA
NSSDEMSEEDEKSRNKINKKSKPKKLGQVKFGFAALMGAATDEDKSENSDGDGEVDVSSA
SFSGLSDKRGSATNFAALLDNSDDDEKSAHEEATPARNPATVLEPGLKHVSEFSSADDEP
ALLIKKKKKKKVDLTFLVGAEGISDSPLLIAEIIDCNQHPNADKLMVCTLDWGGNEPARV
VCGAPNVKSKLKVIFARVGVKIPSTGEVITRRPLKGVMSEGMILSAAEMGWTENAIGVVE
CPRKSVVGEPAPRDPPPDLAMADPAAKKKGKKEKKEKKEKKEKKDSIPLCSVTANANGGI
VSDREEDDNCPEPEMACESVRPQPSIETDQKKKKKKPSDNNSTATMKHDDDLDALFAELG
IESNNNLNEGHGESKAARKRREKKEREAEADSTFSGTDIRDGNPKVASQGDLVGSKSDSE
GGMWEKQLAELEARQSRGDQLTDAEKNKLKKLKKKSKEKEKKERNIANLSNRPKVSAAVL
KMQENLRLRDEAAAADAAAAAAEEARIKAEEEAESKRKADEDAKKAAKKEKERLKKEQLR
AEGKLLSAKQKEEQKRLEAMRAQLLANSNISCAPDHTPTKRSISDDKKKKKAMAEKRRQE
AEATRQAAETVTTVASKHQAKTFDAEGVVIAEESDEAEDDWDAVDNLDDLVKISGKIQAN
HELQEEAAQMAMEDSRQEPNTKENPIRSTTTPQSHKISTAPTDGKVDDKIFQATVLHGQP
SAHQNSEDFDINSGDESGESSDSSSHSNAASGSVDSSDLSSSDYSSSDEYSDSDEDHELQ
TRIATARTARLLRFEVEKNKRSKDRLRCPIICIMGHVDTGKTKILDNIRRTNVQDAEAGG
ITQQIGATFVPDNSLKDRTYALNKGKLDIKVPGILVIDTPGHESFTNLRNRGSSLCDMAI
LVVDIMHGLEPQTLESLNMLRMRKTPFIIALNKIDRMYDWKAQTNAAARDSLADQKQHSR
SEFEDRARKIMLEFAKEGLNAALYWENPDVRTFINVVPTSAITGEGIPDLLHTLVSLTQT
RLNVQLQFFNAVQCTVLEVKMIEGLGTTMDVILINGTLNEGQTIVVAGLEGAIVTTVRAL
LTPQPLREIRVKANYQHHKEISAAMGIKIVAQGLEKAVAGTSLLVQNPEDDLDELKEEVL
SDMKNVLARVDKSGEGVYVQASTLGSLEALLEFLKSPAVNIPVAGIAIGPVNKRDVMGAS
VMHERKCPEFATILAFDVKVTEEAFKMAAELNVKVMTADIIYHLFDQFTAFLEEIKQKKR
EEAAERVSFPCVLKIMPNCIFNKRDPIVVGVDVLKGIARVGTQLCIPSQGFIDIGKIASM
EHNHKQVEKALPGQSVAMKIQAVSSAESSRLYGRHFDHKDELVSRITRESIDMLKDNFRD
ELTKDDWRLVVELKKKFEIFYGEPM
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggggcggaagggcagcgcaaatggaacatcgcgtgcatcgggactagttaatggccct
gacttctctgatgctgtcaaagaaagtgaaactgctatgtttggccggccaaagaaactc
aaaaagggaagaaatcgccgtgatcagagttcggacgaagacacggctcctcttgctgcc
gcaaaaaggcccgcggcgacagtatcagaggagttcgacggtgcgacggaaaagtcgttc
atcaatcaaacgaggtcgcagaagcgcaaacaaaagaaagaaaggaaagatatcggagga
aagggtcgaacttttcatggatcagacgacgatgatgtgctcacccttgcggcgctggca
aacagttccgacgagatgtccgaagaagacgagaaatcgcgcaacaaaatcaacaagaag
agtaaacctaagaaactagggcaggttaagtttggttttgctgctctcatgggtgcagcc
acggacgaggataagagcgagaattcagatggcgatggcgaggttgatgtctccagcgct
tctttctcgggtttgagcgacaaacgtggatcggctacaaatttcgctgctttgctcgac
aactcggacgatgatgagaagagtgcacacgaagaagcgaccccggctaggaatccggca
acggtccttgagcctgggctgaaacacgtatctgagttttcctccgctgacgatgaaccc
gcgcttctcatcaagaagaaaaagaaaaagaaagtcgatctgactttcctcgtgggggct
gagggaataagcgactcccctcttttgatcgctgaaataattgactgcaatcaacacccg
aacgcagataaactgatggtatgcactctcgattggggtggcaatgagccagcacgagtt
gtgtgtggtgctccgaatgttaaaagcaaattgaaggtcatttttgctcgtgtcggtgtc
aaaattccttccacaggagaggtgattaccaggaggccactaaaaggtgtaatgtctgag
ggaatgatactgtctgcagcggaaatgggttggacagaaaatgctatcggagttgtcgag
tgcccaaggaaatctgttgttggcgagcctgcgcccagagatccacccccggatctagcc
atggcggatcctgcggcgaaaaaaaaaggaaaaaaagaaaaaaaagaaaaaaaagaaaaa
aaagaaaaaaaagacagtatacctctttgctccgtgactgcaaatgcaaatgggggcatc
gtttctgaccgtgaagaggatgataactgtcctgagcctgagatggcatgcgaatctgtc
cgcccacagccctcaatcgaaacagaccaaaagaaaaagaaaaagaagccttcggataat
aatagcacagctacaatgaaacatgatgacgatcttgatgcactatttgctgagctcggt
atcgaaagcaacaacaaccttaatgagggccatggcgagtcgaaggctgccagaaagcgg
cgcgagaaaaaagaaagggaagctgaagctgattcaactttttcaggaacggacatccgt
gatggcaatcctaaagtggcaagccagggggacctcgtcggctcaaaatctgacagcgag
ggaggcatgtgggaaaaacagctcgcggagcttgaggcaaggcagtcgcgcggagaccag
ctcactgatgctgaaaaaaataagttgaagaagcttaagaaaaaatcgaaggaaaaggaa
aaaaaggaaaggaacatcgcgaatctgagcaacagaccaaaagtttccgccgcagttctc
aagatgcaggagaacttgcgtctccgcgacgaagccgctgctgcagatgcagcagcagct
gctgctgaagaagccaggataaaagcagaggaagaggctgaatctaagaggaaagcagac
gaggatgcaaaaaaagccgcgaagaaggagaaggaacgtttgaaaaaggaacagctccgg
gccgaaggaaagttgctctctgcaaaacagaaagaggaacagaagcgacttgaggccatg
cgcgcacaactgcttgcaaactccaacatttcgtgtgctccagatcataccccaactaaa
agatcgatcagtgatgacaagaagaagaagaaggctatggcggagaagaggcgccaagag
gcagaagccacccgccaagcggcagaaactgtgacaacggtagcctccaagcaccaggca
aagacctttgatgcagagggcgttgtgattgcagaggaatcggacgaagctgaggatgat
tgggatgcagttgataatttagacgacttggtcaaaatatccggcaagatccaggcgaat
catgaactacaagaagaagctgcacaaatggccatggaagacagccggcaagagccgaat
accaaagagaatcccatcagaagtacgacaacacctcagtcccataagatatccacggcg
ccaactgatggcaaggtggatgacaagatcttccaagcgactgtcttgcacgggcagccc
tcggctcatcaaaacagcgaggactttgacataaattctggagatgaatctggagagagc
tcagattcatcttcacactccaatgctgcatcaggaagtgtagattcaagtgacctatca
tcgagcgactacagctcgtcggacgagtatagtgattcagacgaggatcatgaattgcaa
actcggatagcaacagcaagaactgcccgcctgttgcgatttgaggttgaaaaaaacaaa
cgctcaaaggatcgactccgttgtccaatcatatgcatcatgggacatgtcgacaccggc
aagacaaaaattctggataatattcgaagaacaaatgtgcaggatgcggaagcaggtggt
atcacacagcagatcggagctacgtttgtccctgacaattcattgaaggatcgcacttat
gcactgaacaaggggaaacttgacatcaaagttccaggtattcttgtaatcgacacccct
ggccatgaatctttcacgaaccttcgaaaccgcgggtcatctttgtgcgatatggctatt
cttgttgtggacatcatgcatgggttggaacctcagaccttggaatcgttaaatatgctg
cgaatgcgaaagacgccatttatcatagcactgaacaagattgaccgtatgtacgactgg
aaagcgcaaacaaatgctgccgcaagggacagtcttgcagatcagaagcagcactcgagg
tccgaatttgaggatcgcgcccggaaaattatgctggagtttgccaaagaaggtctcaat
gcagcgttgtactgggagaaccccgatgtgcggacttttatcaatgttgtgcccacctct
gccattacaggagagggaattccggatttgctccatactcttgtctctctcacacagaca
cgtctgaatgtccagcttcaatttttcaacgctgtgcaatgcactgtgcttgaagttaaa
atgatagaggggttgggaacaaccatggacgtcatcctcatcaacggtacgttgaatgag
ggccagaccatagtagtagccggtttagaaggggcgatcgtgacaaccgtgcgcgcgttg
ctgaccccccaaccgttgagggagatccgcgtcaaggcgaattatcaacatcacaaagag
atatctgcagcgatgggaatcaaaatagtggcacaaggcttagaaaaagcagttgccggg
acatctttgcttgttcagaatcctgaagatgacctagatgaactcaaagaagaagttcta
agcgatatgaagaatgtactcgctcgtgtggataaatcaggcgagggggtctacgtgcaa
gcctctacactgggttctttggaggcacttctcgagtttctcaaatcaccagcagtgaac
attcctgtcgctgggatcgccatcggccctgtgaacaagcgtgacgtaatgggtgcatcc
gtcatgcacgaacggaagtgtccagaatttgcaacgattctcgccttcgatgttaaggtg
acagaagaggcgttcaagatggcggccgagctaaatgtcaaagtcatgacggcggacatc
atttaccacctctttgatcagttcacggctttcttggaggaaataaagcagaagaagaga
gaggaggctgctgagcgcgtgtcattcccttgtgttctcaagatcatgccgaactgcatc
ttcaataagcgagaccctattgtcgtgggtgtcgatgtactcaagggtattgctcgcgtt
ggcacacagctttgcattccatctcaaggattcattgatattggaaaaattgcgtcaatg
gaacacaatcacaaacaggtcgaaaaagcccttccgggtcagagtgttgctatgaaaatt
caggcagtatcaagcgcagagtcaagccgattatatggaaggcatttcgaccacaaagac
gagctcgtcagccgcattacacgcgaatcaatcgacatgctgaaagataacttccgagac
gagctcacaaaagatgattggcgacttgttgttgaactgaagaaaaaattcgagatcttt
tatggcgagccaatgtga
DBGET
integrated database retrieval system
