Micromonas commoda: MICPUN_55467
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Entry
MICPUN_55467 CDS
T02695
Name
(RefSeq) predicted protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mis03016
]
MICPUN_55467
Transfer RNA biogenesis [BR:
mis03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MICPUN_55467
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
ApbA
TrkA_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-GeneID:
8250632
NCBI-ProteinID:
XP_002507323
JGI:
MicpuN3_55467
UniProt:
C1FEJ7
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Position
1:join(1687980..1688774,1688904..1689173,1689260..1689529,1689567..1689578)
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AA seq
448 aa
AA seq
DB search
MNAPTLSLCTSFVVGVAAGAGFVLFYDANRSCLRRRATGITPLRQHSFSAPKEQSSVTAA
VNDEIVAEQFTRNVQFFGIEAQKKVADAFVVVIGLGGVGSHCAHMLLRSGVSNLRLVDFD
LVSVSSLNRHALATRNDVGTSKAECLKSHFEKIYPEAQIEAKVMLYERSREELLLGGHPD
FVVDCIDNVETKVDLLAACVRRNIQVIACGGAGAKCDPTRIRLVDIAESAVDPLARAVRH
RLKREYRIETGIWVLLSTEKPKCDLVSVESSDSMLTDYQILPNFRIRTIPVFGALPAIFG
MACAAHVVTHLAGQTFDPEPVLRMQKKQFETQLDRLRDREDARGSQSSSVAVDVELSSIV
SFTQDIVYLVKDVWHARSARAQTPLQSKGMWRNTSGLCLTRWDPSRPACLDNLVLLTLDE
ADEHDAQVWGTMNNSTTQENGLKALVNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccctacactcagtctgtgtacatcgttcgttgtcggcgtcgctgctggcgct
ggtttcgtgttattttatgacgcaaacaggagctgtttgagaaggagagcgacgggcatc
actcctcttcgccagcactcatttagtgcgcctaaggaacaatcatcggtgactgcagct
gtcaacgacgaaattgtggctgagcaattcacacgcaacgttcagtttttcggcatcgag
gcgcaaaaaaaagtcgccgatgcgttcgtcgtcgtgattgggctgggtggagtcggaagc
cattgtgcacacatgctcctgcgctctggcgtttcgaatttgcgtctcgttgatttcgac
ctagtttcagtttcctccctgaatcgacacgccttggcgactcgcaatgatgttggaact
tcaaaggcggagtgtctgaagtcacatttcgaaaagatatatccagaggcacaaattgag
gcaaaggtaatgttgtacgagcgatcaagggaagaattgttattgggaggccatcctgac
tttgttgtggactgtattgacaacgtagagactaaagtcgacctgctcgctgcttgcgtg
cggcggaacattcaggtaattgcttgtggaggagccggtgcaaagtgcgatccaactcgc
ataaggctcgttgatatcgcggagagtgccgtcgatccgcttgctcgtgctgtacgtcat
aggctcaagcgtgaatatagaatcgaaactggtatctgggttctgctatcaactgaaaag
ccaaagtgcgatctggtttctgtagaatcaagcgattccatgttgacagactatcaaatc
cttccgaatttccggataagaactatacctgtgttcggggcgcttccagcaatttttggt
atggcgtgcgcggctcatgttgttacacatctagctgggcagacatttgatccggaacca
gtgcttcgcatgcaaaagaagcagtttgagacccaactagatcgcttgcgtgatcgagaa
gatgcccgagggagccaatcttcttctgtcgcagttgacgtagagctcagttcaattgtt
tcgtttacgcaggacatcgtataccttgtcaaagatgtttggcatgcccgtagtgcgagg
gcacaaacacctttgcagagtaaaggaatgtggcggaatacctctggtttatgcctgaca
cgctgggatccatcgcgtccagcttgtctcgataatctcgtactactgactcttgatgag
gctgatgaacatgacgcacaagtttggggtactatgaataattcaacgacgcaggaaaat
ggtctcaaggctctggtaaatttatga
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