KEGG   Micromonas commoda: MICPUN_55896
Entry
MICPUN_55896      CDS       T02695                                 
Name
(RefSeq) hypothetical protein
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
mis  Micromonas commoda
Pathway
mis03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MICPUN_55896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mis03019]
    MICPUN_55896
Messenger RNA biogenesis [BR:mis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MICPUN_55896
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     MICPUN_55896
SSDB
Motif
Pfam: Mis12
Other DBs
NCBI-GeneID: 8240903
NCBI-ProteinID: XP_002499708
JGI: MicpuN3_55896
UniProt: C1DYL7
LinkDB
Position
2:join(1317297..1317319,1317600..1319829)
AA seq 750 aa
MDRFDASRQNGFFGGGPADESMLGELGGDMEDDYSLPQDVEEVYIPSTKDEELGGLFAST
MQIADRDVNSYIQTSPGGLLRPQDLMGAAAAPPGAPQSPFQAQQQAFEEERRKYQQQMAM
QQMIAERERAQQQQQQRSQMTLEQMEAMHRANMGGGPPMPSAGMLRGIPPPPAHMAPPQM
GQRGPNPAMGTPPPMQGFPPLGAQGPPPGMPPPPGMPPPPRGYPSPNFNNDRGHGGRGRR
GGGGAEWADANNEDTFGESNVRGGTHVPGMPGVQMTQEEKQQMSQQQDQGGWDQGGGYGQ
GQRRQQYDRNGGGRGGRGGRGGQRHNHRNRSAKLMTSDEIEQILRIQWAATHPMDRAAYD
HDYYYQCWLNTNNKGKLREPFAPETLRELAPQAKEARAPTAFVALEGMGRVPFSNIRAPK
PILDFSGKGEKDGGGGREEADGDMSGGRRLEQEPLLAARIMIEDGMCLLLDVDDIDRQVE
ENMAREAPAAMARRRDFLLEGLAGTLRLPAAPVLTPQAVKRGESDAVFERICALHKGRVM
LAKLLPRLRPGCGAASSLVWAVMRHAPALLISGEADRDKSVAAAGHDETQHLRDSAEQLA
TEAAAAVASLNYNATASCIEALAGAMVAHDRSKLPSLAAASGPGASLAQLLRAVLEQGSR
LGILGADYDSSPEWSDCFTTLFGILDAQLATLQTHVEATKAGDKKAAAQALAAAGGAGGL
DLPRDLLRACVPHCSAEQRETIRNRIQSCQ
NT seq 2253 nt   +upstreamnt  +downstreamnt
atggacaggttcgacgcctcgaggcaaaatggcttcttcggcggaggccccgcggacgag
agcatgctcggcgagctcgggggcgacatggaggacgactactcactaccccaggatgtg
gaggaggtctacatccccagcaccaaggatgaggagctcggcgggctcttcgcgtcgacg
atgcagatcgccgatcgcgacgtcaactcgtacatccaaacgtccccgggcggcctgctt
cgaccccaggacctcatgggcgccgcggcggcgccacccggcgcaccgcagtcgcctttc
caggcgcagcagcaggcgttcgaggaggagcgcaggaagtaccagcagcagatggccatg
cagcagatgattgccgagcgcgagcgcgcgcagcagcagcagcagcagaggtcgcagatg
acgctggagcagatggaggctatgcacagagccaacatgggcggcggacccccgatgccc
tccgcgggcatgctccgcggtattcctccgcccccggctcacatggcgccgccgcagatg
ggtcagcggggccccaacccggccatgggaacgccgccccccatgcagggcttccccccg
ctgggtgcgcagggcccgccccccggcatgcccccgccgcccggcatgcccccgccgccc
cgcggctacccgtcccccaacttcaacaacgaccgcggtcacggcggccggggccggcgc
ggcggcggcggcgcggagtgggcggatgcgaacaacgaggacacctttggcgagtccaac
gttcgcggcggcacgcacgtgcccggcatgcccggcgttcagatgacgcaagaggagaag
cagcagatgtcgcagcagcaggaccagggcggttgggaccagggcggtgggtacggccag
ggtcagaggaggcagcagtacgaccgcaacggcggaggccgcgggggcaggggcggccgc
ggcggccagaggcacaaccaccgcaaccgcagcgccaagctgatgacctcggacgagatc
gagcagatccttcgcatccagtgggcggcgacgcacccgatggacagggccgcgtacgat
cacgactactactaccagtgctggctcaacaccaacaacaagggcaagctgcgagagcca
ttcgcccccgagacgctccgagaactcgcgccgcaggcgaaggaagcgagggcgcccacg
gcgtttgtcgcgctggagggcatgggccgcgtccccttctccaacatccgcgcgcccaag
cccatcctcgacttctccggtaaaggggaaaaggacggcggcggcgggcgcgaggaggcg
gacggtgacatgagcggcggccgccgcctcgagcaggagcccctgctcgcggcgaggatc
atgatcgaggacggcatgtgcctcctgctcgacgtcgacgacatcgaccgacaggtggag
gagaacatggcgagggaggcccccgcggcgatggcgcgacgccgcgactttctcctcgag
gggctcgccgggacgctccgcctcccagcggctcccgtgctcacgccgcaggcggtgaag
cgaggcgagtcggatgccgtctttgagcgaatctgcgccctgcacaagggccgcgtgatg
ctcgccaagctcctcccgcggctcaggcccgggtgcggcgcggcgtcgtccttggtgtgg
gcggtgatgcgccacgccccggcgctgctcatctccggcgaggcggatagggacaagtcc
gtcgccgccgccggtcacgacgagacacagcacttacgggatagcgcggagcagctcgcg
acggaggcggcggcggccgtggcgtccctcaactataacgccacggcgtcgtgcatcgag
gcactcgcgggggcgatggtggcgcacgaccgatcaaaactcccgagcctggcggcggct
tcggggcccggggcgtcgctcgctcaattgctgcgtgcggtgctggagcagggcagccgg
ctcgggatcctcggcgcggactacgactcgtccccggagtggtcggattgcttcaccacg
ctgttcggaatcctcgacgcgcagctcgcgacgctccagacgcacgtggaggcgaccaag
gctggggataagaaggccgccgcgcaggcgctggcggcggcgggcggagccggcgggctc
gacctgcccagggatctgttgcgcgcgtgcgtgccgcactgctcggcggagcagcgcgag
accattcgcaaccgcatccagtcgtgccagtga

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