Micromonas commoda: MICPUN_56496
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Entry
MICPUN_56496 CDS
T02695
Name
(RefSeq) predicted protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mis
Micromonas commoda
Pathway
mis03022
Basal transcription factors
mis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MICPUN_56496
09124 Replication and repair
03420 Nucleotide excision repair
MICPUN_56496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_56496
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_56496
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_56496
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MICPUN_56496
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MICPUN_56496
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MICPUN_56496
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MICPUN_56496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
Pox_vIL-18BP
AAA_11
Motif
Other DBs
NCBI-GeneID:
8240609
NCBI-ProteinID:
XP_002499882
JGI:
MicpuN3_56496
UniProt:
C1DZL6
LinkDB
All DBs
Position
2:complement(151335..153728)
Genome browser
AA seq
797 aa
AA seq
DB search
MIFNLEGLTVYFPYEYLYPEQYRYMLELKRALDAKGHGCLEMPTGTGKTITCLSLITSYQ
LQNPECGKLIYCTRTVPEMEKVLAELRNLQAYREKHVGKASQIMALGLSSRKNMCIHPKV
ADEGSRESVDANCRRLTASWVRDKHMAALANEEEAPENAPELCEFFEDYEKEGPNAILPP
GVYTLADLRDFGRKKGWCPYFLARHMISFANVVVYNYQYLLDPKVANMVSRELERECVVV
FDEAHNIDNVCIEALSVNLRQQTLDGASRNIAQLTQRIEHVKAHDEQRLREEYTRLVNGL
AQQGVLDRARSDQLIANPVISEDILREAVPGNIRRAEHFIAFLRRFVEYLKQRMRGGSVE
QETPIAFLAHLQQTAAIDGKTLKFCYDRITSLLKTLEVVDTEDFSAISLICDFATLVGTY
EKGFALILEPYDERYPNIPDPVFQLTCLDASYAIAPVFDKFNSVFITSGTLSPINLYPQL
LGFKPVCSAALDMTLTRECLCPMVITRGADQQMVSTKFDMRDDPGVIQNYGRVLIDLCSC
VPDGIVAFFVSYSYMEQIISKWHETGVLQQVMRRKLVFLETQDVVETSLALDNYRRACNC
GRGAVFLSVARGKIAEGIDFDRHYGRAVIMYGVPYQYTLSRILRARLEYLRETFQIKEAD
FLSFDAVRQAAQCVGRVIRSKADYGLMVFCDKRYNSHDKRGKLPKWITSHLHEQQLNLST
DMAVAIARQFMRDMAQPYDRAGQMGKSLLDQNSVNAMAAAAGFGPPTIGPPPPKPMGGPM
GGPMGGPMGGAGPMTIG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcaacctcgagggcctgacggtctacttcccgtacgagtacctgtacccggag
cagtaccgatacatgctcgagctgaagcgcgcgctcgacgcgaagggccacgggtgcctc
gagatgcccacgggcaccggcaagaccatcacgtgcctctcgctcatcacctcctaccag
ctccagaacccggagtgcggtaagctcatctactgcacccgcaccgtgccggagatggag
aaggtgctcgcggagctgcggaacctgcaggcgtaccgcgagaagcacgtcggcaaggct
tcgcagatcatggcgctcggcctgtcgtccaggaaaaacatgtgcatccaccccaaggtg
gccgacgagggcagcagggagagcgtcgacgcgaattgccgccggctcacggcgtcgtgg
gtgagggataagcacatggcggcgctggcgaacgaggaggaggcgcccgagaacgccccg
gagctctgcgagttctttgaagattacgaaaaggagggacccaacgcgattctcccgccg
ggagtctacaccctggcggacctgagggacttcgggcgtaagaagggctggtgcccgtac
tttctcgcgcggcacatgatctccttcgccaacgtcgtggtgtacaactaccagtacctg
ctggatcccaaggttgccaacatggtgtcgcgggagttggagagggagtgcgtcgtggta
ttcgacgaggcgcataacatcgacaacgtgtgcatcgaggcgctgagcgtgaacttgagg
cagcagacgctggacggcgcgagccgaaacatcgcgcagctgacgcagcgcatcgagcac
gtcaaggcgcacgacgagcagaggcttcgggaggagtacactcggctggtgaacggcttg
gcgcagcagggcgtgctcgacagggctcggagcgaccagctcatcgcgaatcccgtgata
tccgaggacatcctgcgcgaagcggtgccgggtaacatacgacgcgcggagcacttcatc
gcgttcctgagacgcttcgtcgagtacctcaagcagcggatgcggggcggctccgtggag
caagagacgccgattgcgtttttggcgcaccttcagcagacggcggcgattgacggcaag
acgctcaagttctgctacgatcgcatcacgtcgctgctgaagacgctggaggttgtggac
accgaagacttcagcgccatatcgctcatatgcgatttcgccacgctggtgggcacgtac
gagaaggggttcgcgttgatcctcgagccttacgacgagaggtatccgaacataccggac
ccggtgttccagctgacgtgcctggacgcctcgtacgccatcgcgcccgtgttcgataag
ttcaacagcgtgttcataacctccgggacgctgtccccgatcaacctgtacccgcagttg
ctgggtttcaagccggtgtgcagcgcggcgctcgacatgacgctgacgcgcgagtgcctg
tgcccgatggtgataaccagaggcgcggaccagcagatggtgagcaccaagttcgacatg
cgcgacgacccgggggtgatacagaactacggcagggtcctgatcgacctctgctcgtgc
gttcccgacggcatcgtcgcgtttttcgtctcctactcgtacatggaacagatcatcagc
aagtggcacgaaaccggggtactccagcaggtgatgcggcgcaagttggtgttcctggag
acgcaggacgtggtggagacgagcttggcgcttgacaactacaggcgcgcgtgtaactgc
ggcagaggcgcggtgttcctctccgtggcgagggggaagatcgccgagggtatcgatttc
gatcgccactacggcagggcggtgatcatgtacggagtcccgtaccagtacacgctgagt
cgcatcctgcgcgccaggttggagtacctgcgcgagacgtttcagatcaaggaggcggat
ttcctgtccttcgacgccgttcgacaggctgcgcagtgcgtggggcgggtcatcaggagc
aaagccgactacggcttgatggtcttttgcgataagcggtacaactcgcacgataagcgc
ggcaagctgcccaagtggatcacgagccacctgcacgagcagcagctgaacctgtccacg
gacatggcggtcgccatcgcgaggcagttcatgcgggacatggcgcagccgtacgatcgc
gccggtcagatgggcaagagtttgttggatcaaaactccgtcaacgccatggcggcggcg
gcgggcttcggacccccgacgatcgggccgccgccgccgaagccgatgggcgggccgatg
ggcgggccgatgggcgggccgatgggcggggccgggccgatgaccataggatga
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