Micromonas commoda: MICPUN_57159
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Entry
MICPUN_57159 CDS
T02695
Name
(RefSeq) predicted protein
KO
K23288
syndetin
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mis04131
]
MICPUN_57159
Membrane trafficking [BR:
mis04131
]
Protein recycling
Others
EARP complex
MICPUN_57159
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
zf-HIT
Sec8_N
ZNHIT3_C
DUF2007
Motif
Other DBs
NCBI-GeneID:
8241812
NCBI-ProteinID:
XP_002501046
JGI:
MicpuN3_57159
UniProt:
C1E297
LinkDB
All DBs
Position
3:complement(join(1124087..1127214,1127305..1127610,1127715..1127823))
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AA seq
1180 aa
AA seq
DB search
MKGDQECVVCGENSAKYKCPVCRAPYCSVACCRSHKEIPCSKPEAERESAGEEGAGACPV
AAKPKEPSKRPRAKLPSEEDTEDEDGARLRREHIISIASSDSIRKALCDPHLVETLAHID
ASSQAEQALDAACEDPGFQKTAELKDRAKKKVSDATEQSRRFRESMESITGVDKARERFA
QARNPIGSSGSAAGLGAFSGAATTPSSLSDAFSNIGANPYETNGVDRGQSKAEASTAARV
STRNGGARDVHSEVAQGSSSAPADEIISTLAPGFYLPESDFDPLRHVLQSIVETSGEFTT
DTLHKEEDQLSTVVEAVSTLLSKQVLDHYGEFVQGMSNITELTNNLEQSFVIVKNGRRNL
SSASDNVADALRIAESQTRKKSLLSTLNMLVRVQECQGLEAKIKDSLASSSFTKAVNEYI
AAQRILQVLDGLSCAESFRQDLRSLLWDLVAKMEGVLFATCGDFQPSQYQPLFDAYILLG
EQVKPFGDKVQECFLRAVESQTEGVLRRSLGKGGVTEEKVAHDAKIGYKELCQQLSSTQF
FSCFQRTLEFLFDLLCSHHTMLRWHEAQKQMMTNGDEHERVQACEAVGAALVRSRRAIAD
MAGARISALLQASSAPSSGQFKAVLDWARVFIGVAEAFSGTQASALRGHLERAGDRYFES
LHSQRLEALSQMFGRELWVRLPEAAVQQARTALRAAASRGQGGGVKFGVAAFGGVAEDGS
GFNTWIEKGNPFIEGRDSLDASTSSFDGAIKPGQKEPRAEDHVGEAEDEEENAEVCAAYI
DEDEDSDENDNNDAEFKKKEPDVRIVGKGFSVLGGSDGDGKGLSARNPTLTASSLYLLQS
VAEYLRLMRVLTPSMPVIFQGFCSLFERTMVHIFGVFGQHAALEQDSDKMTPRLRSILVQ
AMNGSTLASFMPAVGEGVGAEASSVLSSGNLYGLKERAVALESLSCIADELMGLKPGLKQ
ALPHKEEQKLERFFGQTISSVEDLREHVYRHVTGLLLNLSWVAETIGDSDKLSDKLKVGK
YAKKEISTDHSKWVDDLSAELTQFGAKLACAEVTTEALVMLWDFAIAETASAIVDGFSRV
RKCSSEGRAGMILDVQMLHGNIRRLAPQGTKEDFRMVDTYVKAFYTPQEEMMHFCQTHLE
FSQTQKVALINQMAGAFGWASSVKSEMIAGIGANDSDTFV
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcgaccaagagtgtgtcgtttgtggtgagaatagtgcaaaatacaagtgtcca
gtttgccgtgcgccgtactgctccgttgcctgctgccgctcgcacaaagaaataccttgc
tcgaagcctgaagccgaacgtgaaagtgcgggagaggagggcgccggagcctgcccggtt
gcagcgaagcccaaggaaccgtctaagcgaccgagggcgaagttgccctccgaagaggac
accgaagacgaggacggagccagacttaggcgcgagcacatcatctccatcgcatcgagc
gactcgattcgcaaggctctctgtgatcctcatctcgtagagacacttgctcacattgac
gcatcttctcaagcggaacaggccctcgacgcagcctgcgaagacccaggattccagaag
acggcggagttgaaggacagagccaagaagaaagtaagcgatgcaactgagcagagtagg
aggtttcgggaaagcatggagtcaatcacaggtgttgacaaagctcgggagcgctttgct
caagcacggaatcctattggcagcagcggttctgctgctggactcggcgcattttccgga
gctgccacgaccccatcatcgctaagcgacgcgttttcgaatatcggcgcgaatccttat
gaaaccaacggtgtagatagaggacaatcgaaagctgaggcaagcactgcagcccgtgtc
tcgacgaggaatggaggcgcgcgagatgtgcattccgaggtcgcccagggttcttcctcc
gctcctgctgatgaaatcatttcgacacttgcacccgggttctatcttccagagagtgat
tttgatcctctgaggcatgtattacagtcgattgtggaaacaagtggggaattcacaaca
gacacgcttcacaaggaagaggaccaattgtccacagtcgtcgaggctgtgtcaaccctt
ctctcaaaacaagttctcgatcattacggcgagttcgtgcaaggaatgagtaacatcact
gaattgaccaataacctcgagcagagtttcgtaatcgtgaagaatggacgcagaaacctt
tcttctgcctccgataacgttgccgatgcccttcgaatcgcggagtctcagacgcggaaa
aaatcgctgttgtcaaccctgaacatgctcgtgcgtgtccaggaatgccaaggattggag
gcaaagatcaaggacagtcttgcgtcatcctcgttcaccaaggctgtcaatgaatatatc
gcagcccagagaatattgcaggttcttgacggactcagttgcgcagaaagcttcagacag
gatctgcgctcactgctctgggatttggttgcaaagatggagggggttttgttcgcaact
tgcggggattttcaaccgtcgcagtatcaacctctgtttgatgcgtacatattactcgga
gagcaagtcaaaccgtttggcgataaggtgcaggaatgctttctgcgtgctgttgaaagt
caaacagaaggtgttctgagacgttcgttaggaaaaggaggcgtaacagaagaaaaagtt
gcgcatgatgccaagatcggatacaaagaactgtgtcagcagttgtcgtctacgcagttt
ttctcgtgtttccaaaggactttagaatttttgtttgatcttttgtgcagtcatcatacg
atgttgcggtggcatgaagcccaaaagcaaatgatgacgaatggtgatgagcatgagaga
gttcaagcatgtgaagctgtaggggcagcactcgtccgcagccgccgagcaattgcagac
atggcgggagctcgtatctctgctctgctgcaggcgtcgtccgccccatcttcaggccag
tttaaggctgtccttgactgggctcgagttttcattggagttgctgaagcattttcaggt
acgcaggcctctgcccttagaggccatctcgaacgagccggggatcgttatttcgagtcg
ttgcattctcaacgccttgaggctttgagccaaatgtttggccgtgagttgtgggtgagg
ctccctgaagccgctgttcagcaagcacgcacggcactgcgtgcagccgcatcccgtggg
cagggtgggggggttaaatttggagttgctgccttcggaggtgttgctgaggatggcagt
ggattcaacacttggattgagaaaggtaatccatttatagaaggaagagactcattagat
gcttcaacatcgtcattcgatggagcaatcaagccagggcaaaaggagcctagggcagag
gatcacgtaggagaagctgaagacgaagaggagaatgcagaagtgtgcgcagcatacatc
gatgaagatgaagactcagatgagaacgataacaacgatgccgagtttaagaagaaagaa
cctgacgtaagaattgtagggaaagggttctctgtcctaggtgggtcagacggagacgga
aaaggactttcggcgcgaaacccaacgcttacagcttcatctctttatctgctccagagt
gtcgctgaatacttgcggctaatgagggtacttacaccatcgatgcctgtcatcttccag
gggttttgctctttgttcgagagaactatggtgcacatattcggtgtttttggccagcat
gcagccctcgaacaagattctgataagatgacacctcggttgcgctccatccttgttcag
gcaatgaacggttcaactcttgcttcatttatgccagcagtaggtgagggagttggtgct
gaagcatcgagtgtcttatcctcagggaatctgtacggactgaaggagcgtgcggttgca
ctcgagtctctttcttgtattgcggatgagctgatgggcctcaagccaggtctgaagcaa
gcactgccccacaaggaagaacaaaaattggagcgtttctttggtcagacgatcagcagc
gtagaagatctgagggagcacgtatatcgtcatgtcacaggtttgcttctcaatttatct
tgggtagcagagactatcggagacagtgataagctgagcgacaaattaaaggtcgggaag
tatgcaaagaaggagatatcgacagatcactccaagtgggtggatgatctatcggctgag
ctgactcaatttggtgcaaaacttgcctgtgctgaggtaactacagaagcactggtgatg
ctttgggatttcgcaatagctgagacggcatctgcaatcgtagatggcttctctcgagtg
cgtaagtgttcttctgaaggtcgtgctggcatgattcttgatgtccagatgctccatggg
aacatccgtcgcttggcacctcaagggaccaaggaagacttccgaatggtcgacacttac
gtcaaggcgttctacacgccacaagaggagatgatgcatttttgtcaaacgcacttggag
ttttcacaaacgcaaaaggtggctctgataaatcagatggcaggagcgtttggctgggct
tcatcagtcaaaagtgaaatgattgcaggtatcggggcgaatgatagtgataccttcgtg
tag
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