Micromonas commoda: MICPUN_57369
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Entry
MICPUN_57369 CDS
T02695
Name
(RefSeq) ATP-binding cassette superfamily
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
mis
Micromonas commoda
Pathway
mis02010
ABC transporters
mis04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MICPUN_57369
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
MICPUN_57369
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mis02000
]
MICPUN_57369
Transporters [BR:
mis02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
MICPUN_57369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_30
AAA_23
G7C_GBD
SRP54
Motif
Other DBs
NCBI-GeneID:
8242336
NCBI-ProteinID:
XP_002500717
JGI:
MicpuN3_57369
UniProt:
C1E2U4
LinkDB
All DBs
Position
3:1530098..1536223
Genome browser
AA seq
2041 aa
AA seq
DB search
MTRGEEARGPSRCVPTATSKPRATLLTTWPFSRPRDIPFPAQTSGSNARTAMPALTSNRP
FFAHRSTAQFFALVRKNFTLKTRGILCCCTGVEIILPVFFLAVLCLPKALVKDSVNNDVV
TKPYQIATPWGSTEYSGGRGAYCVDGYKLLVAPATPEATRIANKAAMNLICSGPRSSYVD
SWAGNFLKAIGCETWGGMDTPSEPMVHHDPALAALIWNGTGSSRLADVNDQEYQIYHGRA
NNSTTTMRELCRDSCLRDTNGCYKDTWGDHVLPHLVKTFATKADGLAWIEANPGPTLAFV
AFAAGVEGSEDASAKKVRYSLHTNTTAYDGGECQNSDSGNCAYRTREYTVNEWEAESDNP
SWRGYGVFSRVQNAIDAALIDEKDGDGVDYGVTLDASVRPFPWLGYDYNIGGIIAAGVFS
ILGALAFMSNVVIIMKSVVVEKELRLREGMQMMGMSSNMYWLSWFYTHFLTAMCTVVLIV
IIGMYPFEYTNPFLQLVFYTLWITSCILWNYMISTVFSRSITASVVGCFVYVMSIAPAIA
VRIVSPQGSAGWLATCLLPGSSINMWGHILARLELAKEGITFETADKHMNKYGDFSAASV
IGMVFLDCVLYALMTWYLDKVWPTEFGQKLSPLFPFTKEYWLGESHNVDDDSATGKETTE
FGENFEPLTDDQLRKASVKIRGLKKQFSNGVVAVDDLTVTFVPGQVSALLGHNGAGKTTT
ISMLTGTLNATGGDAVINGKSIRTEMGRIRESLGICPQFDVLWPTLTVREHLRLYAAFGG
MDKGAIPAEIVSAVNEVALSEKLHYKTGQLSGGQKRKLSLAISFIGKPSVVFLDEPTSGM
DPYSRRFTWEVIRKRAATSSIMLTTHFLDEADLLCDRIAIMSAGKLACVGSPVFLKNRYG
AGYHLTLARKSASASQGKISAGNADGVLALVRKYVGDNATLASDVGAELSFTLPFESTAK
FPDLFKDLDGKLDSLGFQSYGISCTTLEEVFLSIARGGVGGNSEATRKSLDAARPATDVN
GNESKLLMDDPDDEDLDEAGHQIRAGYVTGWPLVARQCKGLLWKRRLNWQRDWKSILVQL
AFPVLFFVLALVLAGLEYEDSKDFQNMEVTRRMLGNRPTIASVKATDAEAAAVFAQWPEG
TAVTRAYQPMMDCACNCPAKGQNAVFDTAACCMQNLTAAIAGAAAAGLSADATLGYCAQA
SLSGFGSAQGSCGLTSGGVGAAGGMDVSPQCASGGGDTFDAYLWSVTEERVTCDRQDTIG
CDALHVEGYDAATGRYQHTVYAHQSAYHSVPATVNEANSAILRKRTGGAYVGISVSNEWL
PEVKRFVDGDVVDSSNDTTFITSLFIVMGASILTASVVVFPVYERRNNSKHLQMVSGINK
VAYWCCHWLADAAQMIVPIAAIMIIFAAFNIEQYRGQLDAIFVLTLCFVLCSITYTHLVG
FYFKNEFYAFVGLTGAKLFLSVICTATGMVLELLKDVNDDTKKAYAALSVILPIIIPHYS
YGKGLYDIGQNKLNENRQRFNAQTMSLTPMGSKDWWAEDVIGDDIAWLVGLAVGFGVLII
LVELSEGSIATLASKGLEFLRIRSRNTSADNSSLDEADDEDVAEERRRVNDAAAAGFSAD
RRGENSADTRDGVILHGITKTFGFGSGAKKAVRNLSVGMPRGQCFGLLGINGAGKTSTFK
MITGEFAPTRGDTRVLVTGGGKREYLSVHEDLSRARTVMGYCPQFDGLQPNLTGREHLQF
YAQVRGVPDELIEHTVNALLEKMSLTKYSERQAGTYSGGNKRKLSVAIALIGEPAVVLLD
EPSTGMDPEARRFMWDVISASTRGRTIVLTSHSMEECEALCNRIGIMVGGQFKCLGSLQH
LKNRFSEGYTVDVRFQSGLARIVYDAVVAKGIHAQVMESHDTELKLRVDDTGNTKLWQIF
AAIEDIRAMKKPERHVVQVDGEDPIPVGADDAGGLIDDYSVSQTTLEQVFVRFASTQSEE
TQHAPGMTPGIDGLGQPPLGSSLAVQPPPPQGEFHQFAPADADDERAPPPDMVPPGYVQR
P
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcggcgaggaggcgcgcggaccctcgcggtgcgtccccaccgcaacctcaaaa
cctcgcgcgacgcttctcaccacgtggcccttttcccgtccacgagatattccttttcca
gcgcagacatccgggtcgaatgctcggacggcgatgcccgcgctgacctccaatcgtccc
ttcttcgcgcacaggtccaccgcgcagttcttcgcgctggtgcgcaagaacttcacgctc
aagacccgcggcatcctctgctgctgcaccggcgtcgagatcatcctcccggttttcttc
ctcgccgtgctctgcctgcccaaggcgctcgtcaaggacagcgtcaacaacgatgtggtc
accaagccctaccagatcgccactccttggggctccacggagtacagcggcgggcggggg
gcctactgcgtcgacgggtacaagctcctcgtcgcgcccgccaccccggaggcgacgcgc
atcgcgaacaaggctgcgatgaacttgatctgcagcggcccgcggagttcgtacgtggac
agctgggcgggcaactttttgaaggcgatcgggtgcgagacgtggggggggatggacacg
ccgtccgaaccgatggtgcaccacgaccccgcgctcgcggcgctcatctggaacggcacc
ggatcgtccaggctcgccgacgtcaacgaccaggagtaccaaatctaccacggcagggcg
aacaactccacgacgaccatgcgagagctgtgccgcgactcgtgcctgagggacacgaac
ggctgctacaaggacacgtggggcgatcacgtcctgccccatctcgtcaagaccttcgcc
accaaggctgacggcttggcgtggatcgaagctaacccgggcccgacgctcgccttcgtc
gcattcgccgcgggggtggagggaagcgaagacgcctccgcgaaaaaagtgaggtacagc
ctccacacgaacaccaccgcgtacgacggcggcgagtgccaaaacagcgacagcggcaac
tgcgcgtatcgcacccgcgagtacacggtgaacgagtgggaggcggagagcgataacccc
tcgtggaggggttacggggtcttctcgagggtgcagaacgcgatcgacgcggcgttgatc
gacgagaaggacggcgacggcgtcgactacggcgtcacgctcgacgcgtccgtcaggccc
ttcccctggctcggttacgactacaacatcggcggcatcatcgccgccggcgtcttttcc
atcctcggcgccctcgcgtttatgtcaaacgtggtgatcatcatgaagtccgtcgtcgtg
gagaaggagctgcgcctgagggaagggatgcagatgatggggatgtcttctaacatgtac
tggctgtcgtggttctacacccacttcctcacggcgatgtgcaccgtggttctcatcgtg
attatcggcatgtacccgtttgagtacacgaatcctttcctgcagctggtgttctacacg
ctctggatcacgagctgcatcctgtggaactacatgatatccacggtgttcagccgaagc
atcaccgcgagcgtcgtgggatgcttcgtgtacgtcatgtccatcgcgccggcgatcgcg
gtgcgcatcgtgtcccctcagggcagcgcgggctggctcgccacttgtctgctgccgggc
tcctccatcaacatgtgggggcacatactcgcgaggctcgagctcgcgaaggaagggatc
acgttcgaaaccgcggacaagcacatgaacaagtacggcgacttctccgcggcgtccgtc
atcggcatggtgttcctggactgcgtgttgtacgcgctgatgacgtggtacctcgacaaa
gtttggcccacagagtttggccagaagctcagcccgcttttcccgtttaccaaggagtac
tggctcggcgagtcgcacaacgtcgacgacgacagcgcgacgggcaaggagacgaccgaa
ttcggcgagaacttcgagcccctcaccgacgaccagctgcgtaaggcgtcggtcaagatt
cgaggcttgaagaagcagtttagcaacggggtcgtcgccgtagacgacctcaccgtgacc
ttcgtccccggccaggtctccgcgcttctcggacacaacggcgcggggaagaccacgacg
atcagcatgctcaccggcaccctcaacgccaccggcggcgacgccgtgatcaacggcaaa
tccatccgcaccgagatgggacgcattcgcgagtcgttgggcatctgcccccagtttgac
gtcctctggcccacgctgacggtgcgcgagcacttacgactctacgccgcgttcggggga
atggacaaaggcgcgatcccggccgagattgtctccgcggtgaacgaggtggcgttgtcc
gaaaagttgcactacaagacggggcagctgtccggcgggcagaagcgaaagctgtcgctc
gccatctccttcatcggaaaacccagcgtggttttcctggacgagcccacgagcggcatg
gacccttactcgcgccgattcacctgggaggtgatccgcaagcgagcggcgacgtcgtcc
atcatgctgaccacgcatttcctcgacgaggctgacctcctgtgcgatcgcatcgccatc
atgagcgccggcaagctggcgtgcgtcgggtcgccggtgtttttgaagaatcgatacggc
gccggttaccacctgacgctggcgcgtaagtcggcgagcgcctcccaggggaagatatcg
gccggtaacgccgacggggtactcgcgctggtgcgcaagtacgtcggggacaacgcgacg
ctcgcgtccgacgtgggcgccgagctctcctttaccctgccgtttgagtccaccgccaaa
tttcccgacctgttcaaggatctggacggcaagctggactcgctcgggttccagagttac
ggcatctcgtgcaccaccctggaggaagtgttcctttccatcgcgcggggcggcgtcggt
ggcaactcggaggcgaccagaaagtctctggacgcggcgagacccgctaccgacgtcaac
ggtaacgaatccaagctgctgatggacgacccggacgacgaggacctcgacgaggcgggc
catcagattcgcgcgggttacgtcaccggctggccgctcgtcgcgcgccagtgcaaggga
ctgctgtggaaacgccggctcaactggcagcgcgactggaagagcatactggtgcagctc
gcgttcccggtgctgttcttcgtgctcgccctcgtgctcgcgggcttggagtacgaggac
tccaaggattttcaaaacatggaggtgacccgccgcatgctcggaaaccgacccacgatc
gccagcgtcaaggcgaccgacgcggaggccgccgcggttttcgcgcagtggcccgaaggg
accgccgtgacccgcgcgtatcagcccatgatggactgcgcgtgcaactgcccggcgaag
ggccaaaacgccgttttcgatacggcggcttgttgcatgcaaaacctcaccgccgccatc
gcgggcgccgccgcggcggggctctccgcggacgcgaccctggggtactgcgcgcaggcg
tccctgagcggcttcggctcggcgcagggttcgtgcggcctcacgtcgggcggcgtcggc
gcggcgggcggcatggacgtgagcccccagtgcgcttcgggtggcggcgacacctttgac
gcgtacctgtggagcgtcaccgaggagagggtgacgtgcgacaggcaggatacgatcggg
tgcgacgccctccacgtcgaggggtacgacgcggcgacggggcggtaccagcacacggtg
tacgcgcatcagagcgcgtatcacagcgtcccggctaccgtcaacgaggccaactcggcg
attttgaggaagaggaccggcggcgcctacgtgggcatatcggtgtcaaacgagtggctc
cccgaggtgaagcggttcgtggacggcgacgtggtggacagcagcaacgacaccacgttc
atcacgtccctgttcatcgtgatgggcgcgtcgatcctcaccgcgtccgtcgtcgtcttc
cccgtgtacgagcgtcgcaacaacagcaagcacctgcagatggtgagcggcatcaacaag
gtggcgtactggtgttgccactggctcgcggatgcggcgcagatgattgtcccgatcgcg
gcgatcatgatcatcttcgcggctttcaacatcgagcagtaccgcgggcagctcgacgcc
atcttcgtcctgaccctctgcttcgtcttgtgctccatcacctacacgcacctcgtgggc
ttctacttcaagaacgagttctacgccttcgtcggcctcaccggcgccaagctgttcctg
tccgtcatctgcaccgccaccggcatggtgttggagctcctgaaggacgtcaacgacgac
accaagaaggcttacgcggcgctctccgtgatcctccccattatcatcccccactactcc
tacggcaaaggactgtacgacatcggccagaacaagctgaacgagaaccgccagcggttc
aacgcgcagaccatgagtctcacccccatgggcagcaaggactggtgggccgaggacgtc
atcggagacgacatcgcgtggctcgtcggcctcgccgtggggttcggcgtcctcatcata
ctcgtcgagctctccgaggggagcatcgccacgctcgcgtccaaggggctggagtttttg
aggatcaggtccaggaacacctccgcggacaactcgtcgctcgacgaggctgacgacgag
gacgtcgcggaggagcgccgccgcgtgaacgacgcggcggccgccggctttagcgccgat
cgaaggggagaaaactccgccgacacccgcgacggcgtgatcctccacggaatcaccaag
acgttcgggttcgggtccggcgcgaagaaggcggtgcgcaacctatccgtcggcatgccc
cgcgggcagtgcttcggcctcctcggcatcaacggcgcgggtaagacgtcgacgtttaag
atgatcaccggggaattcgcgcccaccaggggcgatacccgagtgctcgtcaccggcggc
ggcaagcgcgagtacctcagcgtgcacgaggacctgtcccgcgcgcgaaccgtcatggga
tactgcccgcagttcgacggccttcaacccaacctgaccggccgggagcacctgcagttt
tacgcgcaggtgaggggcgtcccggacgagttgatcgagcacaccgtcaacgcgttgctc
gagaagatgtcgctgaccaagtactcggagcgacaggcggggacctactctggaggaaac
aagcgcaagctctcggtggccatcgcgctcatcggcgagcccgcggtggtgctcctggac
gagccctcgaccggtatggaccccgaggcgcgtcgtttcatgtgggacgtcatctccgcg
agcacgagggggcgcaccatcgtgctgacgtctcacagcatggaggagtgcgaggcgctg
tgcaaccggatcggcatcatggtcggcggccagttcaagtgcctcggctcgctgcagcac
ctcaagaaccggttctccgaggggtacacggtggacgtgcggtttcagtcgggcctcgcg
cggatcgtctacgacgccgtcgtcgccaagggtatccacgcgcaggtcatggagagccac
gacacggagctcaagctcagggtggacgacaccggcaacacgaagctttggcagatcttc
gccgcgatcgaggacatccgcgcgatgaaaaagccggagcgacacgtcgtgcaggtggac
ggcgaagatcccatcccggtaggggcggacgacgccggcggcttgatcgacgattactcc
gtgtcgcagactacgctggagcaggtctttgtgcggttcgcgtcgacgcagagcgaggag
acgcagcacgcgccgggaatgacgcccgggattgacgggttggggcagccgccgttagga
tcgtccctcgccgttcagccgccgcctccgcagggcgagtttcaccaattcgccccggcg
gatgccgacgacgaacgcgccccgccgccggacatggtcccgccgggatacgtccagcga
ccgtga
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integrated database retrieval system