Micromonas commoda: MICPUN_58090
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Entry
MICPUN_58090 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14289
exportin-5
Organism
mis
Micromonas commoda
Pathway
mis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MICPUN_58090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mis03016
]
MICPUN_58090
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_58090
Transfer RNA biogenesis [BR:
mis03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
MICPUN_58090
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
MICPUN_58090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
TetR_C_24
Motif
Other DBs
NCBI-GeneID:
8243172
NCBI-ProteinID:
XP_002501487
JGI:
MicpuN3_58090
UniProt:
C1E4M4
LinkDB
All DBs
Position
4:join(1252207..1252302,1252499..1252993,1253236..1254786,1255162..1257228)
Genome browser
AA seq
1402 aa
AA seq
DB search
MASVQQYLSVLAGAQSGANADAQRAAAQMQIELKNGDPRNAINLCMQLIARGQPLEARHF
GYGVLQHVVARRWSQFTHPERQELAKLVYDKLSECGAVPTSEPPEPFMIKSKAATLMAEV
VRQEGAALWSSIMPELATGACSDSPVRAELSALVMRYVAEDVAVYNSDIIGGRMKELLYG
LTSTLPQALQAMYRLLEVHFSAAMNAAAAGNTPVAKAHAAAVSAALSAAAVYGEWAPLAP
LMRSGVLDACCQLLSSGADIAFRAQACEVLRHVAHRRRGDTVNSAIASGAAGVVAGGKNA
SSGGPAALAAADADDAAREAAADAAAVVVGLEGICRGLGIAAQRVLAAPPAEVGSEEGEY
ARRLTETVATVAANHVQVIGDEGLRFAFLEALLGLTKHPRLDVLAAAIPAWPGLLRAMGA
ELPGTFVRPDKAIGSGVWGAQQRGGFGGGGGGVENGASAGASGGGVSLPGGAVAALLECA
RTWLQRGGGLASGLSTAGAPECKGDEWEDEYETRDELREAWIGLRARLMEVTKLCTALEP
AAAAAAMAGSVTAVLGWVQPGGPLDPAKAAAMGPDGRSAVDDAIGSALEGCVSFVEPAMA
AMPLSSANPAAAAAVAPALEGMLTRMLAVEFSSPVAVSQMSRLLESMGRTALVRPDAGTA
LLHRLFAILSGLPADDVKSPPARAKAAMTAGRTSQAARQRVCAAILGVCAAAPEVFNAHL
EAFANQVDSLRSGGRLSGAERGALAEALLAVAGPSGPARVRDVLRWLLESVQRRWVPAPG
VVSPDLVHLASLRELAKGEGAGGTQGLSDAHWELFHDVQLAERCLRRSAGDHDPGQQDGG
GGGPGGGGGTSAANGSDSPDKMSQGSGGAGGWPNIPAGMVRPVDPPPPVEECPAADHLEW
VLSISNALCRAIHDAWTPNGVAEAAALGLDRALCMSPEEQAAHLVHGPARTFALEGGGMP
PASDTADAARNFLRGMRDSAYALVQLLSVHAPGAFYPNRAAAAAVGAAAFHELGHMHDRH
ARVLLHTLVRPVLGRCPAAHRPIWHAALTAGLLPHMHERLAGSWARVKASGVGKAGGGAG
GMMEDDDGAFDAGALAVGGVNTGGGSAVIEDLIGERVTRDLARDHSAILELLAVPEGTFG
RKTRGSGLTGHLRGAMNGVNTGVTSGGGGESSSGAAAARLADGGGRHVREWMSAVAGYDG
GSGACARAGIATATAALTWGDSEAAGRALAFLKGIVAAAAAADGDQTLREMAGGEIFPGC
LAGLTEPSNSAHQAELLGVIRDIVVHLLPVAGSVRRVLLGLPGMTEQSLGQLINDLAQIR
SEKKAANRVKEMIVQAAGGGDALRAFAEARAGATSTGAIQVPNVTTRHQANRLEAAAKPG
WTEEEVNAIGLNPLTANSRAQQ
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgtgcagcagtacctttcggtgctggccggcgcgcaatcgggagctaatgcc
gatgcccagcgcgcggctgcgcagatgcaaatcgagctcaagaacggagatccgcggaac
gccatcaacctctgcatgcagctcatcgcgcgcggccagcccctcgaggcgcgccacttc
ggctacggcgtcctgcagcacgtggtcgccaggcgatggtcgcaattcacgcaccccgag
cgccaggagctcgccaagctcgtgtacgataagctctccgagtgcggcgcggtcccgacg
agcgagcccccggaacctttcatgatcaagagcaaggcggcgacgctcatggccgaggtt
gtccggcaggagggcgccgcgttgtggagctccatcatgccggagttggcgacgggcgcg
tgctccgactcccccgtccgcgcggagctctcggcgctggtgatgcggtacgtcgccgag
gacgtcgccgtgtacaactcggacatcatcgggggacgcatgaaggagctgctctacggc
ctgacgtccacgctgccccaggcgctgcaggcgatgtaccgactgctggaggttcacttc
tcggcggcgatgaacgccgccgccgccggaaacacccccgtcgccaaggcacacgccgcc
gcggtctccgcggccctgagcgccgccgcggtgtacggcgagtgggcgcccctcgccccg
ctgatgcgaagcggcgtgctcgacgcctgttgtcagctgttgtcctcgggcgcggatatt
gcgtttagagcgcaggcgtgcgaggtgcttcgtcacgtcgcgcatcggcgcaggggcgac
acggtcaacagcgccatcgccagcggagcggcgggcgtcgtcgccgggggtaagaacgcg
tcgtccggaggacccgcggcgttggcggcggcggatgcggatgacgccgctcgcgaagcc
gcggcggatgccgccgccgtcgtcgtcggactcgagggaatctgccgcgggttgggcatc
gccgcgcagcgggtcctcgccgccccacccgcggaggttgggtcggaggaaggggagtac
gcgcggcggctgacggagacggtcgcgacggtggcggcgaaccacgtccaggtcatcggc
gacgaggggttacgctttgcgttcctcgaggcgctcctcggactgaccaagcacccgagg
ctggacgtcctcgccgcggcgattcccgcgtggccggggctgctcagggcgatgggcgcg
gagcttcccgggacgttcgtgaggccggataaggcgatcgggtcgggtgtgtggggcgcc
cagcagcgggggggattcggcgggggcggcggcggcgtcgagaacggagcgtcggcgggg
gcaagcggggggggtgtttcgctccccgggggcgccgtcgcggcgctgctggagtgcgcg
aggacgtggctgcagcgaggcggcgggctcgcgtcgggtctctccaccgcgggggcgccc
gagtgcaagggagacgagtgggaggacgagtacgagactcgagacgagctccgggaggct
tggatcggtttgagggcgcgactcatggaggtgaccaagctgtgcaccgcgctcgagccg
gcggcggcggcggcggcgatggcggggtccgtcacggccgtgctcggctgggtccagccg
gggggaccgctggaccccgccaaggcggccgcgatgggacccgacgggcgcagcgccgtc
gacgacgccatcggaagcgcgctggagggatgtgtcagctttgtcgagccggcgatggcg
gcgatgcccctgtcgtccgccaaccccgccgccgccgccgccgtcgcgcccgcgctggag
gggatgctgacgcggatgctcgcggtggagttctcatccccggtcgcggtctcgcagatg
tcgaggctgctggagtcgatggggaggacggcgctggtccgaccggatgccgggacggcg
ctgctgcaccggctgttcgccatcctttccgggttgcccgcggatgacgtcaagtcgccg
ccggcgagggccaaggcggcgatgacggcggggcggacgtcgcaggcggcgcggcagagg
gtgtgcgccgccatcctcggggtgtgcgccgcggctcctgaggtgttcaacgcccatctc
gaggctttcgcgaaccaggtggattccctgcgaagcgggggccggctcagcggcgccgag
cgaggggctctcgccgaggctctactcgccgtcgccggtccaagcggcccggcccgggtc
cgcgacgtgctccgctggctcctcgaatccgtccagcggcggtgggtcccggcgcccggg
gtggtgtccccggacctcgtccacctggcgtcccttcgcgagctcgccaaaggggagggc
gcgggggggacgcaagggctcagcgacgcgcactgggagctcttccacgacgttcagctc
gccgagcgatgcctgcgaaggtcggcgggggaccacgacccggggcagcaggacggcggc
ggcgggggcccggggggtggaggcggtacctccgcggcgaacgggagcgactcccccgac
aagatgtcgcaggggagcggcggcgccgggggatggccgaacatcccggcggggatggtt
cgcccggttgatccgccgccgcccgtcgaggaatgccccgccgcggatcacctggagtgg
gtcctgtcgatatccaacgcgctctgccgcgcgattcacgacgcgtggaccccgaacggc
gtcgccgaggcggcggcgctgggcctggaccgggcgctgtgcatgtctcccgaggagcag
gcggcgcacctggtgcacggccccgcgaggacgttcgcgttggaggggggcgggatgccc
ccggcgtcggacaccgccgacgccgcgaggaacttcctccgaggtatgagggactccgcc
tacgccctggtccagctcctgtcggtgcacgcgcccggggcgttttatccaaaccgggcc
gccgccgccgccgtcggcgccgccgcgtttcacgagttgggacacatgcacgacaggcac
gcgcgggtgctgcttcacacgctcgtcaggcccgtgctcggtcgatgccccgcggcgcac
cggcccatctggcacgccgccctcaccgcggggctgctcccgcacatgcacgagcgcctg
gcggggtcctgggcgcgggtgaaggcttccggggttgggaaagccgggggcggggcgggc
gggatgatggaggacgacgacggggcgttcgacgccggggcgctcgcggtgggcggggtc
aacaccggtggaggatccgcggtgatcgaggacctcatcggggagcgcgtgacccgggac
ctcgcgcgggaccactcggccatcctcgagctcctcgccgtccccgagggcaccttcggg
cgaaagacccgcggaagcggtttgacggggcacctgcgcggcgcgatgaacggggtcaac
accggcgttacatccggcggcgggggcgagtcatcatccggcgcggcggcggcgcggctg
gcggacgggggcgggaggcacgttcgtgagtggatgtccgccgtcgccggatacgacggc
ggatccggggcgtgcgcgagagccggcatcgcgacggcgacggcggcgctcacatggggg
gacagcgaggctgcggggagggcgctggcgttcctcaaggggatcgtagcggctgcggcg
gcggctgacggggaccagacgctgcgggagatggcgggcggggagattttccccgggtgt
ctcgcggggctcaccgagccgagcaacagcgcgcaccaggctgagctgctcggggttatc
cgagacatcgtggtgcacctgctgccggtggccgggtccgtgcggcgggtgctgctggga
ctgccggggatgacggagcaatccttggggcagctcatcaacgacctggcgcagattcgc
agcgagaagaaggcggcgaacagggtcaaggagatgattgtgcaggctgcgggcgggggc
gacgctctcagggcgtttgcggaggcgagagccggcgccacgagcacgggcgcgatccag
gtccccaacgtgaccacgaggcatcaggcgaacaggttagaggcggcggccaagccgggg
tggacggaggaggaggtcaacgcgatcggcctcaaccctctcaccgcaaactccagggcg
cagcagtga
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