Micromonas commoda: MICPUN_58098
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Entry
MICPUN_58098 CDS
T02695
Name
(RefSeq) DEAD/DEAH box helicase
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_58098
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_58098
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUN_58098
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
Pre-60S particles
Helicases
MICPUN_58098
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
MICPUN_58098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DRTGG
Motif
Other DBs
NCBI-GeneID:
8243177
NCBI-ProteinID:
XP_002501490
JGI:
MicpuN3_58098
UniProt:
C1E4N2
LinkDB
All DBs
Position
4:join(1271091..1271969,1272297..1272316,1272470..1273265)
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AA seq
564 aa
AA seq
DB search
MEVDDAPISADAKDRMKAVGITHLTPVQERTLRAVIVDGLDVLVRAPTGSGKTLAYLLPI
AHALARLPPGDLANPGRPNAIVFLPTRELAAQVHQHAERHVADAGFGCALIVGGADEKSQ
LAAIRANARCVIGTPGRIKEFVDRGVIKTDLVIAQVLDEADRLLDGGFERDVESVMHSPG
GQARTMCLSATMPPSLARFLQRQLPPDHAVIDMFGRGGGNVGGAVEHLAVTTHRNDLAGT
VLDAIDAYAAGAAGRGDTDDDSYSTRATGQAIVFVETKTFAEQLSGTLAIAYEGYTVSRP
AWFSATGFRRRLVIYPPTVSFKVDPGFIHSFIHSSRQERLDADGEKNKSTRRRTVTSLHG
DLPQIARDAAIASLRAGECDVLVATDVAARGLDLPGVELVVHADLPRTADAYAHRAGRAG
RPGCAVRGASLLLPPPGPEHAAHVARLEREAKIAVRRLTAVGEREARGRSVAAAVAASAA
AASRSFDGGVGGDGVVNAASSPACVRADAVSEEDAQAARARLGERMLVADRFGEFTGELS
ELRGGKSAGASGGKSKGKAKGRRR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacgacgcccccatctccgccgacgccaaggaccgcatgaaggccgtgggc
atcacgcacctcaccccggtgcaggagcgaaccctgcgcgcggtcatcgtcgacggcctc
gacgtcctggtcagggcgcccacgggatcgggcaagacgctcgcctacctccttcctatc
gcgcacgcgctcgcgaggctgccgccgggagacctcgcgaaccccgggcggcccaacgcg
atcgtgttcctgcccaccagggagctcgccgctcaggtgcatcagcacgcggagcggcac
gtcgcggacgcgggtttcggctgcgctttaatcgtcggcggcgccgacgaaaagtcgcag
ctcgccgcgattcgcgcgaacgcgcggtgcgtcatcggaaccccggggcgcatcaaggag
ttcgtcgaccgcggcgtcatcaagacggatctcgtcatcgcgcaggtcctcgacgaggcg
gaccggctgctggacggcgggttcgagcgagacgtggaatccgtgatgcactcgcccggg
ggacaggcgcgaaccatgtgcctcagcgcgacgatgccaccgtcgctcgcgcggttcctc
cagcggcagctcccgcccgaccacgccgtcatcgacatgttcggcaggggcggcggtaac
gtcgggggtgcagtggagcatctcgcggtgacgacgcatcggaacgatctggcgggaacg
gtgttggacgccatcgacgcgtacgcggcgggagccgcgggacgcggggatacggacgac
gattcgtattccacgcgcgccacggggcaggcgatcgtgttcgtggagacgaagaccttc
gcggagcagctgtcggggacgctggcgatcgcgtacgaggggtacaccgtttcgcgcccg
gcttggttttccgcgacgggttttcgacgccgactcgtcatctacccacccacggtttct
ttcaaagttgaccccggattcattcattcgttcattcattcatcgcgacaggagcgactg
gacgccgacggcgagaagaataaatcgacgcggcgcagaaccgtcacctcccttcacggc
gacctcccccagatcgccagggacgccgccatcgcctccctccgcgcgggcgagtgcgac
gtcctcgtcgccaccgacgtcgccgcccgcggcctggacctacccggcgtggagctcgtg
gtgcacgcggatttacctcggaccgccgacgcctacgcgcacagggcgggtcgagcgggt
cggcccgggtgtgcggttcgcggcgcgtcgctgctccttccccctcccggcccggagcac
gcggcgcacgtcgcgaggctggagcgggaggcgaagatcgcggtgagacggctcacggcg
gttggggagagggaggcgcggggtaggagcgtcgctgcggcggtcgcggcgtcggctgcg
gcggcttctcgaagtttcgacggcggcgtcggcggcgacggggtggtcaacgcggcgtca
tcgccggcgtgcgtgcgtgccgacgcggtgagcgaggaggacgcgcaggctgcgagggcg
aggctgggtgagcggatgctcgtggctgacaggttcggggagttcaccggcgagctgagc
gagctccggggcggtaagtcggcgggcgcgtcgggcggcaagtcgaaggggaaagcgaag
ggaaggcgcaggtga
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