Micromonas commoda: MICPUN_58101
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Entry
MICPUN_58101 CDS
T02695
Name
(RefSeq) predicted protein
KO
K12850
pre-mRNA-splicing factor 38B
Organism
mis
Micromonas commoda
Pathway
mis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUN_58101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mis03041
]
MICPUN_58101
Spliceosome [BR:
mis03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
MICPUN_58101
Complex C
U4/U6.U5 tri-SnRNP related factors
MICPUN_58101
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
8242778
NCBI-ProteinID:
XP_002501893
JGI:
MicpuN3_58101
UniProt:
C1E4N5
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Position
4:complement(1278274..1279296)
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AA seq
340 aa
AA seq
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MATFIPIAGTGRDNGKSYNMERVLRSNILNSDYFVQLSKIEDFMDLVDEIYNEVDHVEPW
MSGNARGPSTAFCLLYRLFTMELDDRNVNHLIRHRDSPYIRAIGFLYVRYVRDPKEFGRW
FDPFFKDDEEFAPMPGGKNVTIGAFVRDLVLDQYYFETIFPRCPEVTRRALVDRIVRLGF
GAEPLGCGGCGGSRRVEAPSGARPPSVKAALSVNLGQRAPHMAGVTERGRGIDPSRRDRD
RSREDGNRNRDRDGNRNRDRDRDRERDRDRDRDRDRDRRRSRSRDRDHPYRRDDRRGGDR
GGSRDARKSHKRERDGSRDRAYGGGGYRRDGSPRRAGWAR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggccaccttcatacccatcgcgggcacgggtcgcgacaacggcaaatcctacaacatg
gagagggtcctgcgctccaacatcttgaattcggattacttcgtgcagctctccaagatc
gaggacttcatggacctggtggacgagatctacaacgaagtcgaccacgtggagccgtgg
atgagcggcaacgcgcgcgggccgtccaccgccttctgcctgctgtaccgcctgttcacc
atggagctcgacgaccgcaacgtaaaccacctgatccgccaccgcgactcgccctacatt
cgcgccatcgggttcctgtacgtgcggtacgtgcgcgacccgaaggagttcgggcgatgg
ttcgaccccttcttcaaggacgacgaggagttcgcgccgatgcccggcggcaagaacgtc
accatcggcgccttcgtccgggacctcgtactcgaccagtactacttcgagaccatcttc
ccgaggtgcccggaggtgacgaggcgagcgctcgtcgaccgcatcgtccggctcgggttc
ggggctgagcccttgggatgcggcgggtgcggcggatcccgcagggtcgaggcacccagc
ggcgcgaggccccccagcgtcaaggctgcgctgagcgtgaacctggggcaacgggcgccg
cacatggcgggagtcaccgagaggggccgaggcatcgacccgtcccgcagggacagagac
cgaagcagagaggatggaaacaggaacagagacagagacggcaacaggaacagggacagg
gacagggacagagaaagggacagggacagggacagggacagggacagggacaggcgacgg
agcaggagccgcgaccgggaccacccgtatcgccgcgacgaccggcgcggcggggaccgc
ggcgggagcagggacgcgcgcaagtcgcacaagagggagagggacggcagcagggaccga
gcgtacggcggcggggggtacaggcgcgatggatccccgaggcgcgcgggttgggcgcga
tga
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