Micromonas commoda: MICPUN_58575
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Entry
MICPUN_58575 CDS
T02695
Name
(RefSeq) DEAD/DEAH box RNA helicase
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_58575
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_58575
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUN_58575
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
Pre-60S particles
Helicases
MICPUN_58575
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
MICPUN_58575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
Cas3-like_C_2
CMS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
8243795
NCBI-ProteinID:
XP_002502509
JGI:
MicpuN3_58575
UniProt:
C1E681
LinkDB
All DBs
Position
5:complement(651671..654043)
Genome browser
AA seq
790 aa
AA seq
DB search
MALITSLSRGITIRAAATTVIAARATRSRVAPAGIRAVRTTRSSPFAPAAAGRSANVRAS
GFRFRAISTDSAAVPVLEEEDDEEVSNLLGKVDNMYKDLSVDDIFDDMEDAARREDDDED
DEEDEDDNKRDPMHVDNFPLSDITKAALRKRGIETLFPIQASVLEPALQGRDVVGRARTG
TGKTLGFSLPIIESLLSNPSNRTDRSRNPRCIVLAPTRELANQVEKEIQATVPSLRTLCV
YGGVAISNQERPLRRGVDIVVGTPGRLIDLIQRGSLNLHDIEYCVLDEADQMLAVGFEED
VERIMEEIPEQRQTFLFSATMPSWVTRITQKYLADHVTIDLVGSQEQKVADTIDVMSCAC
SHTSRTTILADLVTVYGKGAKAICFTQTKREADEVTAALGRRMATEVLHGDIAQAQRERT
LKRFRDGRFSVLVATDVAARGLDITDVDLVVHYELPHDTESFVHRCGRTGRANKKGAAIA
MYTPREKSRIRSIVRETGVKFRVINPPTAAEVMTSSAEQASIEIDLVDDELLPYFTPTAE
KILAAVKNGGADGRSESEVLAAALAALSGHTEPPPPRSMLTGDVGQTTMIARGNMILPRD
LLRAMSEVSRAAADGVGRIRILADNSGLCFDMQHEQVKPLLEELDDGYLGPIGVEVADSL
PELVEERDRGYGGGGGGRGYGRGGRGGGFGGRGRGRGGFRGGGRGGGYERRSFSDRGERG
SFQRRDDGGFERRGGGDRHGGSYRGGGYDRDRPRGGGDRGGGGGGGGGWDRGGYGGGRGG
GGPARYGGYD
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcatcacctccctgagccgcgggatcaccatccgcgcggcggccacgaccgtc
atcgccgctcgcgcgacccgctcgcgcgtcgcccccgccggcattcgcgccgttcgcacc
acgcgctcgagcccctttgcgccggcggcggcgggtcgctccgcgaatgtccgagcctcc
gggttcaggttccgcgccatctccaccgactccgccgcggttccggtcctcgaggaggag
gacgacgaggaagtctccaacctcctcggcaaggtggacaacatgtacaaggacctcagc
gtcgacgacatcttcgacgatatggaggatgcagccaggcgggaggacgacgatgaggat
gacgaagaggatgaggacgacaacaagcgcgaccccatgcacgtggacaacttccccctc
tccgacatcaccaaggctgccctccgcaagcgcggcatcgagaccctgttccccatccag
gcgtcggtgctcgagcccgcgctgcagggcagggacgtggtgggccgagcgaggacgggc
acggggaagaccctcgggttctcgctgcccatcatcgagtcgctcctctccaaccccagc
aaccgcaccgacaggtcgcgtaacccgcggtgcatcgtgctcgcgcccacgcgcgagctc
gcgaaccaggtggagaaggagattcaggccaccgtgccctccctccgcaccctctgcgtc
tacggaggcgtcgccatctccaaccaggagcgcccgcttcgccgcggcgtcgacatcgtc
gtcggcacccctggccggctcatcgatctcatccagcgcggctccctcaacctccacgac
atcgaatactgcgttctcgacgaggcggaccagatgctcgccgtcgggttcgaggaggac
gtcgagcgcatcatggaggagatccccgagcagaggcagactttcctcttctcagcgacg
atgccgtcgtgggtcacgcgcattacccaaaagtacctcgccgaccacgtcacgatcgac
ctcgtggggtcccaggagcagaaggtggccgataccatcgatgtcatgtcctgcgcgtgc
tcccacacgagcaggaccaccatcctcgcggacctggtcaccgtgtacggcaagggcgcc
aaggccatctgcttcacgcagacgaagagagaggctgacgaggtcaccgccgctctcgga
aggcgcatggccaccgaggtgctccacggcgacatcgctcaggcgcaacgcgaacgcacc
ctcaagcgcttccgcgacggccgcttcagcgtcctcgtcgccaccgacgtcgccgcgcgc
ggcctcgacatcaccgacgtcgacctcgtggttcactacgagctcccccatgacaccgag
tcctttgtgcacaggtgcggtcgcaccggccgcgccaacaagaagggcgccgcgatcgcc
atgtacacccccagggaaaagtccaggatccgcagcatcgtccgcgagacgggcgtcaag
ttcagggtcatcaacccccccaccgcggctgaggtgatgacctcatccgcagagcaggcg
tcgatcgagattgacctcgtcgacgacgagctgctcccttacttcaccccgacggcggag
aagatcctcgcggcggtcaagaacgggggtgccgatgggaggtccgagagcgaggttctc
gccgcggcgctcgcggccctctccgggcacaccgagccccctcccccgcgctcgatgctc
accggcgacgtcggccagacgacgatgattgcccggggaaacatgatcctccccagggac
ctcctccgcgccatgtcggaggtttctcgtgccgccgccgacggcgtcgggcgcattcgc
attctcgcggataactccggcctgtgcttcgacatgcagcacgagcaggtgaagccgctg
ctcgaggagctcgacgacggctacctgggccccatcggcgtcgaggttgcggattcgctc
cccgagctcgtcgaggagagggaccgcgggtacggcggcggcggcggcgggcgcgggtac
ggccgcggcggcaggggcggcggcttcggcggccgcggcaggggcaggggcggcttcagg
ggcggcggcaggggcggcgggtacgagcgcaggtccttctccgatcgcggcgagaggggc
tcgttccaacgccgcgacgacgggggtttcgagaggcgcgggggcggggataggcacggc
ggatcctaccgcggcggcggatacgaccgcgaccgtccgcgcggcggcggcgaccgcggc
ggcggcggcggcggcggcggcgggtgggaccgcggcggttacggcggtggtcgcggcggc
ggcggcccggcgcgctacggagggtacgactga
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