Micromonas commoda: MICPUN_58629
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Entry
MICPUN_58629 CDS
T02695
Name
(RefSeq) predicted protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_58629
Enzymes [BR:
mis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MICPUN_58629
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MICPUN_58629
Prokaryotic type
MICPUN_58629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
8243437
NCBI-ProteinID:
XP_002502150
JGI:
MicpuN3_58629
UniProt:
C1E6D6
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All DBs
Position
5:join(778298..778435,778513..780312)
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AA seq
645 aa
AA seq
DB search
MAGGAPPGKGQPEPAMGGAGGNGGETGQQQNNEMQVTQQQGQAMSVVHVLRLGLRIVGLG
GNMAGLTDEQRARAEANKAAALARRAALAAQIQIPPRDDVTSQVAPERLRRLNFKRVDPR
GRYVLLWVQSAQRAMHNDALEYAVQRANEHDVPLVAVFGSTAGFPHANERHLAFMYQGLV
ELRETLERTRGVQLLAYTPVGGGEPGEVIVAASAGAREVIVDAGYTRPLLDWRRTLAKRA
DRLVTEVECDVVVPLYGPGGGAGRSEPAAATLRPKILSRLPALTRNELEPTPLRRRLAAR
LDAEALLLGGEGEPGMAGFARVPLWESVDACLDALDAAVLGVGVDRSVKPASGYHVGGER
EALRKLDRFLESKLTNYASSRNDPSLRLQSHLSPHIHYGQISVVYVAHRARKVAAARPEL
RRSVDVFLDELVVRRELAINFCLNNPAYDAYEGVPEWARRTLATHATDHRSFVYTLEQFE
RCATHDALWNAAQRELVVSGKQHNYLRMYWAKKMLEWSADPREAWCWAIHLNNKYSLDGR
DPSSYTGVGWCWGLHDREFPEAAVTGTVRRMSEAGMRSKFNAGVSDYLNRWGDGDARSRA
GKRSAAKAAAESAAGAPGTGTPRAESRQTRLEEMFSKKPKTGSGG
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggtgcaccccctggaaagggccaacccgagcccgcgatgggcggcgccgga
ggtaacgggggcgagaccggccagcagcagaacaacgagatgcaagtgacgcagcagcag
ggccaggcgatgagcgtggtgcacgtgctgaggctcggtttgcgaatcgtaggtttaggt
ggaaacatggcgggattgacggatgagcagcgcgcgagggcggaggcgaacaaggctgcc
gcccttgccaggcgagccgcgctcgccgcccagatccagatccctcctcgagacgacgtc
acgtcccaggttgctcccgagaggctccgcaggctcaacttcaagcgcgtcgacccgcgg
ggcaggtacgtcctgctctgggtccagtccgctcagcgtgcgatgcataacgacgccctg
gagtacgccgtccaacgagcgaacgagcacgacgtacccctcgttgccgtgtttggctcc
accgcgggcttcccccacgccaacgagcggcacctggctttcatgtaccagggactggta
gagctgagggagacgctggagcgaacccgcggggtccagctcctggcgtacacccccgtc
ggaggcggtgagccgggggaggtgatcgtcgcggcgtccgcgggggcgagggaggtgatc
gtcgacgccggttacacgagaccgctgcttgactggcgacgaacgctcgccaaacgcgcg
gaccgactcgtcaccgaggttgagtgcgacgtggtggtgcccctgtacgggcctggggga
ggcgcggggaggtccgaacccgcggctgcgacgctcaggcccaagatcctgtcgcgcttg
cccgcgctgacgcggaacgagctcgagccgacgccgcttcggaggcggttagccgcgagg
ttggacgcggaggctctgctgctcggcggcgagggggagcccggcatggcggggttcgcg
cgcgtccccctgtgggagtccgtggacgcgtgcctcgacgcgttggacgccgccgtcctc
ggcgtcggcgtggacaggagcgtcaagcccgcgtctggctaccacgtcggcggcgagcga
gaggcgcttcgcaagctcgatcgtttcctcgagagtaagctcaccaactacgcgtcctcc
cgcaacgacccgtccctgcgcctgcagtcgcacctctcgccgcacatacactacggccag
atcagcgtggtgtacgtggcgcacagggcgaggaaggtggcggcggctaggcccgagctg
aggcggtcggtggacgtctttttagacgagctggtggttcggcgcgagctcgccatcaac
ttttgtctcaacaatcccgcgtacgacgcgtacgagggggtgccggaatgggcgcgtcgg
accctggcgacgcatgcgacggaccacaggtcgttcgtgtacaccttggagcagtttgag
aggtgcgcgacgcacgacgcgctgtggaacgcggcgcagagggagctggtcgtctccggg
aagcagcacaactacctccgcatgtactgggccaagaagatgctcgagtggtcggccgat
cccagagaggcgtggtgctgggcgatccacctcaacaacaagtacagcctggacggcagg
gacccgagcagctacacgggcgtggggtggtgctggggtctgcacgacagggagttcccg
gaggcggcggtgacgggaacggtgcggaggatgtcggaggctggcatgcggtccaagttt
aacgccggagtcagcgattacctgaaccgatggggcgacggggatgcgagatcgcgggcg
gggaagagatccgcggcaaaggctgccgccgagtcagcggcgggggcgccggggaccgga
actccccgagcagagtccaggcagacgaggctggaggagatgttctcaaagaagccaaag
accggcagcggcggctaa
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