Micromonas commoda: MICPUN_58699
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Entry
MICPUN_58699 CDS
T02695
Name
(RefSeq) SNF2 super family
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
mis
Micromonas commoda
Pathway
mis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MICPUN_58699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_58699
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
MICPUN_58699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
8243480
NCBI-ProteinID:
XP_002502193
JGI:
MicpuN3_58699
UniProt:
C1E6L2
LinkDB
All DBs
Position
5:909410..911770
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AA seq
786 aa
AA seq
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MADHTAVGAMMTPPRSKPGGGGDSADESLASPIVMATPCSIRGTEEVVPGTPEEPPMAEA
VPTKRVTMQMRHPPKPLHDPNDPGALVLCTAAEAEALSGDGSPGVAVVVDPYIAGKLRPH
QREGVRWMYRVLHGLEPDAGPHTGCLLADDMGLGKSLQSIALVWTMLKQGPRGVPTAKRV
LLVCPASLVGAWGAEFNKWLGGVRAQAALAEGGGVDAADAYEKWRRGTQPGTESAFDCWP
VLVTSYETLRRLSPIAARAEPDLLICDEAHRLRNAQQGSQTLAALRAVDVPRRVLLTGTP
IQNNLDEYAAVMDFACPGLLGPVAEFHRRFTAPVQRGSEPNATSADVAGAQRAANELARL
TAGRVLRREASINAAHLPAKTEMVVFCKPTEMQRAMYEQGAKIVQGWTEGKAGASTATAA
ALCAIGLLRQLANSVDQVVKKTSAKSKRGSKGGFDNESPPSKQARIEKEDDNGGLSDGDE
SDEGEISAGSSTKDADDLRAKLSSSVPSGYSGGVKGSGKLATLRTLLREMASNSSGDGER
MVVVSGFSAALDLAAGLCAELGLATDRLDGRVPPDARSGLVRNFNAGRGGRVMLLSCVAG
GAGLNLVGACRLVLFDTSWNPAHDNQAMARVWRDGQTRPVTIYRLLAAGTVEEKVFQRQL
LKHREAAAAGYGGESIGGDGGKTDVGRFTRDELSELVRFSSPAKPATLTAVGWQDSRDAV
EDPLLRAAIDDDNSMITAVVRLADDGGRAKAIAAAKEEFAAAKPKAMKGGKKRLAFQDLL
SKSKNR
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcacaccgcggtgggagcgatgatgacgcctcctcgtagcaaacccggtggc
ggaggcgactcggctgacgagtcgctcgcctctccgatcgtgatggcgactccctgttcg
atccgtggtacggaggaagtcgttcctgggacgcccgaggagccaccgatggcggaggcg
gtccccaccaagcgggtcaccatgcagatgcgacatcctccgaagccgctgcacgatccc
aacgatccgggggcgctcgtgctgtgcacagcggccgaggctgaggccctatcgggagac
ggaagcccgggtgttgccgtggtcgtcgatccttacatcgcgggcaagttgcgtccgcac
cagcgtgagggcgtccggtggatgtatcgcgtcttgcacggtctggaacccgacgctggc
cctcacacggggtgcctcttggcggatgatatgggactcggcaagtccttgcagtcaatc
gcgctggtgtggaccatgctgaagcagggaccgcgcggggtgccgaccgcgaagcgggtg
ttgctggtgtgcccagcatcgctggtgggggcgtggggagcggagttcaacaagtggctt
gggggtgtccgtgcgcaagccgcgctggcagaaggtggcggggtggacgcagcggatgcc
tacgagaaatggaggcgagggacgcaaccgggcacggagagcgccttcgactgctggccc
gtcctggtgacgtcctacgagaccttgcgccgactctcgccaatcgccgcaagagccgag
cccgaccttctgatatgtgacgaggcgcacagactgcgcaacgctcagcagggatcgcag
accctcgcggcgttgcgcgcagttgacgtgccgcgccgcgtcctcctcaccggcacccca
atccagaacaacctggatgagtacgcggcggtgatggactttgcgtgcccggggctgctg
gggccggtagcggaattccatcgcaggttcacagcgccggtccaacgaggcagcgagcca
aatgcgacttcggccgacgtggcgggggcgcaacgcgcggccaatgagctggcgaggctc
accgcggggcgggtgctgcgacgtgaggcgtccatcaacgctgcacatcttccggcgaag
acggagatggtcgttttctgtaaacccacggaaatgcagcgtgcgatgtacgagcaagga
gcgaaaatcgtgcaaggatggactgaaggaaaggcgggtgcctcaactgcaaccgcggca
gccctgtgtgcgattggccttctcaggcagttggcaaattctgtcgaccaggttgtgaaa
aagacgtcggcgaagtcaaagagaggcagtaaaggtggttttgacaacgagtccccacca
agcaagcaggcccgcattgagaaagaagacgacaacggaggactaagcgatggagatgaa
agcgatgagggcgaaatttcggcgggcagctccacgaaagacgcggatgatctgcgtgca
aagctctcttccagcgtcccatcagggtacagtgggggtgtcaagggttccggcaagctg
gcaaccctgaggacgcttcttcgagagatggcctcgaactcttccggcgatggagaacgc
atggtggttgtctccgggttctcggctgccctcgatctcgccgcgggcctgtgcgctgag
ctcggcctggccaccgacagattggacggtcgtgtcccaccggatgccaggtctggactg
gttcgtaacttcaacgccggccgagggggacgcgtgatgctgctctcgtgcgtggcgggt
ggagccgggctgaacctggtcggcgcatgcaggctcgtgctgttcgacacgagttggaac
cccgcacatgacaaccaggcgatggcacgtgtttggcgcgacggccaaacacgccctgtg
accatctatcgcctgctggcggcgggcaccgtggaggagaaggtattccagcgacagctc
ctgaaacacagggaggcggctgcagcgggttatggcggtgaatctatcggaggtgacggc
ggcaagaccgacgtcggacgtttcaccagggacgaactgagcgagctcgtgaggttctca
tcgccagcgaagccagccacgctcacagcggttgggtggcaggactcaagggacgctgtg
gaggatcctctgcttcgcgcggccatcgacgacgacaatagcatgataacagccgtcgtg
cgccttgcggacgatggggggcgagccaaggctatcgctgcagctaaggaagagtttgca
gcggcaaagccaaaggctatgaaaggtgggaaaaaacgtttggccttccaggacctactg
agtaaatcaaagaacaggtag
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