Micromonas commoda: MICPUN_58945
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Entry
MICPUN_58945 CDS
T02695
Name
(RefSeq) predicted protein
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_58945
04121 Ubiquitin system [BR:
mis04121
]
MICPUN_58945
Enzymes [BR:
mis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
MICPUN_58945
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MICPUN_58945
Ubiquitin system [BR:
mis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
MICPUN_58945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
UBC_like
LTN1_E3_ligase_6th
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
zf-RING-like
zf-RING_16
zf-C3HC4_2
RINGv
Motif
Other DBs
NCBI-GeneID:
8243606
NCBI-ProteinID:
XP_002502692
JGI:
MicpuN3_58945
UniProt:
C1E7B2
LinkDB
All DBs
Position
5:complement(join(1402936..1408699,1408836..1408924))
Genome browser
AA seq
1950 aa
AA seq
DB search
MGKDKVKKAGQASAAGARASGFGGGGSFGGIGFGGYSGAQSLSSQTYDDAAGAVEVDDDL
ARVMARLVKHNTATRLKALADLVDVCEGRACGGGGGGGDASASAPYARSPEELAAALPQW
TLAYRRLHLDNSLAVRVASAKAMAVVAGGAGKGLGKHLRRLAPSWWFAAHDPDETVAKEA
LGAFESVFPTDAKRANALLFAHAEILDQASENLLVRSPDAMPHREGTADERAERHERLLA
STVRAIGGFAKRAFVGADFDAGDPKASAALEKLGAAIDAAGCLGPFVRSPAAALRRAAYV
ALMDVISSGAVADRLIGDGARCGDRRKKIARLCVATALEETDGSNFSALWELVVTYPQAR
AGCWDDVHAGVEVIPALKSHLASGCHGNATASAPSILPFLSLLPPRALTDSSSDVPNSAA
GGSESVANASALADVLAAAWEGWKLCCTPSRADDAAALLRCQREGLLYGLIVLAESAADP
SAFRAGLVSASVLDRWAPECMATATHGDVERRALCEVLATISCKPELDAVAGTMWAALAS
RAVDLCGGKTGGKMDAAGAARVVTFHRCLLHAAERRRLKTGEDGGDWVRERFAKPVASAA
LESVAAYPGDAAAADVVAAMVRSHGAGCLPTDEAMRGLVDTCESPALLAAVVSAAPELWD
DALSSLSSKAGTLADVLSRLSLTGGVDDAKKWGRVRLDDAVVGAAGGGVDGSGVGALLIA
AAPLVSSGAAVEVMTRLAATVRRGDAAAAGTRDAAGAWAWPPPDGDRAGAREAWEDLFEA
LFLEHLTSRESQEDEIDANGYASSSDGEESIENDGSSSADDEDDDDDDDEEDDAEDEEDE
VDSKPRSSTGAGDEAWEALERSVASNPVDLGQSSIHRRLASAAAEYLIGNRGAKASAIAH
SAVSVLVALGVESTEAGRAVASAAWESGKDAPETLPAYLAGVAELVGWAPVMDAANIEPG
APFEFADRILSVPSVASSFESFLLAADRGAPLDGTLARLASVATSRDKESADAALAHAQR
LLRKVRRRRAQWLEDGDGLFRVWFDSVHEKDGSSGRATASVLPALLPPRDRRDASHLKFV
ANAVADAAAMVARRNVALSGPLLLIAAACFSDPQDGGSRAGSTAASRPVVVKKGEAPELL
DLFRKLSLREAAEAAAAAAAARFGAADGGAGGPDQTPEEAEEAELGVAALSLGTIENCAA
DMDARDWQTIIGRLESWTQTRVLHAETAAEETASIAASVCHEEIGKDGPVPVVEHAPVGW
KIAAEAARILLRIDALPVAVATPDPSKPGDRGDIVAYSVKGPDAGAVARQLASADWPTAR
GDVHASLARIALAAGAQLHCCNAVRDEEAAVGASMITAWWRIRSVEAPLWVYLATLWSSS
SGQSAVAATNAFREMDHWSTDAGCGTIPSLYALMLSSNDRSRVIDDIDEDVAESLTRASY
ALLSTPALLKPAVIGLDANIDDVALIEEAVDKAEDEGDAPDGDAPDGESEDAVCEPVAPR
SRDPVQIAAAAAEKAAIREQLADALAPNPSDSVATGGRGSPAPKRRVTGSAHRVTSEGTL
LCWSLLLRLTTRLPHGSRTRERLLEYARATKAVPRLMSAIAPTLPLAEANARITPRGSRR
GSLSSIVDAPGRADSPARGEDADGAGIPPAWRELARLSRDAASSGGSGGGKAAAGASVDP
LDPGLLYRPVDRLSGTCDGDGDDDDDVVGEKKTRVSSRRAAREADERKSARLSVGLYHAA
LRALPAAVRVWFADLRDKNFARALASATASCVSPALLAAEFDAVERASKGTYGGGGLDDD
AGELTIKASRGNREVVARYDIDDACLELVVRLPASYPLGAAELDCAKRVGISEARLRKWM
LTVSSILQHQNGAVAEGLMLWRSNIDREFKGVEPCPICYLVIHGTNHQTPRLVCRQCSNK
FHSACLYKWFQSSSGSKCPLCQVPWGSNYR
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggacaaggtcaagaaggcgggccaggcctccgcggcgggagcccgcgcgagt
ggcttcggcggcggcggatcgttcggagggatcgggttcggtggatactccggcgcgcaa
tccctgtcgtcgcagacctacgacgatgccgcgggcgcggtcgaggtggacgacgacctg
gcgagggtcatggcccgactcgtgaagcacaacaccgcgaccaggctcaaggccctcgcg
gacctcgtcgacgtgtgcgagggacgcgcgtgcggcggcggcggcggcggcggggacgcg
tccgcctcggcgccgtacgcacgatcccccgaggagctcgccgccgcgctgccccagtgg
acgctcgcctaccgcaggctccacctggacaactccctcgccgtcagagtcgcgtcggcg
aaggcgatggcggtcgtcgctggaggcgccggcaagggcctggggaagcacctcaggcgc
ctggccccgtcctggtggttcgccgcgcacgatcccgacgagacggtggcgaaagaggcg
ctcggcgccttcgagtcggtctttcccaccgacgcgaaacgcgccaacgccctgctgttc
gcgcacgccgagattttggaccaggcttcggagaatctcctcgtcaggtccccggacgcg
atgccccacagggagggcaccgccgacgagcgcgccgagcgtcacgagcgtttgctcgcg
agcacggtcagggccatcggcgggttcgccaagcgcgccttcgtcggcgccgatttcgac
gcgggtgacccgaaggcgtcggcggcgttggaaaagctcggcgccgcgattgacgccgcc
gggtgcctgggtccgttcgtcaggtccccggcggccgcgctgcgtcgcgccgcgtacgtc
gcgctgatggacgtcatctcctccggcgccgtcgcggaccgtctgatcggcgatggggcc
cggtgcggggatcgacgaaagaaaatagcccggctgtgcgtcgcgacggcgctggaggag
acggacgggtcaaacttttcggcgctctgggagctggtcgtgacgtacccccaggccagg
gcggggtgctgggacgacgtgcacgcgggcgttgaggtgatcccggcgctgaagtcgcac
ctggcgagcgggtgccacggcaacgcgacggcgtcggcgccgtccatccttccgttcctg
tcgctcctgccccctcgagctctgacggactcgagctctgacgttcccaattcggcggcg
gggggttccgaatcggttgccaacgcgtcggccctcgcggacgtgctcgccgccgcgtgg
gagggctggaagctgtgctgcacgccgtccagggcggacgacgccgccgcgctcctgaga
tgccaacgcgagggcttgctctacggactcatcgtcctcgccgagtccgcggcggacccg
agcgcgtttcgcgcggggctcgtcagcgcgtccgtgctggaccgctgggcgcccgagtgc
atggcgacggcgacccacggcgacgtcgaaagaagagcgctgtgcgaggtgctcgcgacg
atcagctgcaagccggagctcgacgccgtcgcgggaacgatgtgggcggcgctcgcgtcg
agagccgtcgacctgtgcgggggtaagacgggcggtaagatggacgccgcgggcgccgct
cgcgtcgtgacctttcatcgatgcctcctccacgcggcggagcgcaggcgtttaaagacg
ggcgaagacgggggcgattgggtccgcgagaggttcgcgaagccggtggcgtcggcggcg
ctcgaatccgtcgccgcgtaccccggcgacgccgccgccgcagacgtcgtcgccgcgatg
gttcgatcgcacggcgccgggtgcctcccaacggacgaagcgatgcgcggactcgtcgac
acgtgcgagtcgcccgctctgctcgccgcggtggtatccgcggctccggagctctgggac
gacgcgctctcctctctgtcctccaaagccgggacgctcgccgacgtcctctcgcgactg
tcgctcaccggtggcgtcgacgacgcgaagaaatggggcagggttcggctggacgatgct
gtggtcggtgccgcgggcgggggcgtcgacggctctggcgtgggcgcgctcctgattgcc
gcggcgcccctcgtgtcctcgggcgcggcggttgaagtcatgaccaggctcgcggcgact
gttcggcgaggagacgccgcggcggccgggacgagggacgccgcgggggcttgggcgtgg
cccccgcccgatggtgatcgcgccggcgcgagggaggcgtgggaagatctcttcgaggcc
ctgtttctcgagcacttgacgtcgcgtgaatcgcaagaggatgaaatcgatgcgaacgga
tacgcttcctcgagcgacggggaagaatctattgagaacgacgggtcgtcgagcgcggat
gacgaagacgacgacgacgacgacgacgaagaggatgacgcagaggacgaagaggacgaa
gtcgactcgaagccacggtcgtcaaccggtgcgggtgatgaagcttgggaagctctggag
cgatcggtggcgtcaaatcccgtggacctcggccaatcctccattcatcgcaggctcgca
tccgccgccgccgaatacctcatcggcaaccgaggagccaaggcttcggcaatcgcacac
tccgcagtttccgtcctcgtcgcactcggcgtcgagtcgactgaagccggacgcgcagtc
gcgtccgccgcgtgggagtcgggcaaagacgcgccggagactctgcccgcgtatctcgcc
ggcgtagcggagctcgtgggatgggctccggtgatggacgcggcgaacatcgaaccgggc
gcaccgttcgagtttgccgatcggatcttgtccgtaccgtccgtggcctcgtcgttcgaa
tcgttcttgctagccgcggataggggcgccccgctggacgggaccctcgcgcgactggcg
tccgtcgcgacgtctcgagacaaagaatcagccgacgccgcgctcgcacacgcgcagcgt
ctgcttcgcaaagtccgacgacgcagggcgcagtggctggaggacggcgacggcttgttc
cgagtttggttcgattccgtgcacgagaaggacgggtcgagcggccgagcaaccgcgagc
gtgcttcccgcgttgttgccgccgcgagaccgccgcgacgcgtctcatttaaaattcgtc
gcgaacgccgtggccgacgccgccgcgatggtcgcgcggcgcaacgtcgccctgagcgga
ccgctgctgctcatcgcggcggcgtgcttctcggatccgcaggacggtgggtcgcgcgca
ggatcgacggcggcgtcgaggccggttgttgtcaagaagggcgaggcgcccgagcttctc
gatctgttcaggaaactttcgctgagggaagccgcggaggcggccgcggctgccgcggct
gcgcgattcggcgccgcggacggcggcgcgggtggacccgatcaaaccccggaggaggct
gaggaggctgagctcggggtcgcggcgctgagcctagggacgattgaaaattgcgccgcc
gacatggacgcgagggactggcagacgataatcggccgcctcgaatcgtggacgcagacc
agggtgttgcacgcggagaccgcggcggaggaaaccgcgtcgatcgcggcgagcgtgtgc
cacgaggagatcgggaaagatggacccgttcccgtcgttgaacacgcgccggttggttgg
aaaatcgccgcagaggctgcgaggatactcctcaggatcgacgccctccccgtcgcagtc
gcgacgccggatccgtctaaacccggcgatcgcggcgatatcgtcgcgtacagcgtcaag
ggaccggacgccggagccgtcgcgcgccagctggcatccgccgattggccgacggctcgc
ggagacgttcacgccagcctcgccagaatcgcgctcgcggcgggggctcagctgcactgc
tgcaacgcggtcagagacgaggaagccgcggttggagcgtccatgattaccgcttggtgg
cgaatcagatccgtcgaggcgcccctgtgggtatacctcgcgacattgtggagctcctcg
tcgggccagtcggcagtcgcggcgacgaatgcgtttcgggagatggaccactggtccaca
gacgccggctgcggcacgattccctcgctctacgccctcatgctctcgtccaacgatcga
agccgcgtcatcgacgacatcgatgaggacgtcgcggagtctctcaccagggcatcgtac
gcgctgctgtccacgccggcgctgctcaagcccgcggtgatcggcctcgacgccaacatc
gacgacgtggcgctcatcgaggaggccgtggacaaggctgaggacgagggagacgctccc
gacggcgacgctcccgacggcgaaagcgaagacgccgtgtgcgaacctgtggcgcccaga
tccagggatccggtgcagatcgccgccgccgcggcggagaaggcggcgattcgggaacag
ctcgcggatgcgctcgcgccgaacccttccgattccgtcgcgaccgggggtaggggctcc
cccgcgcccaagcgacgcgtcaccgggtccgcgcatcgggtcacgagcgagggaactctg
ctgtgctggagtctgctgctgcgcctgaccacgcgcctgccccacggatcgcggacgagg
gaacgattactcgaatacgcccgggcgaccaaggctgtcccgaggctcatgtccgccatc
gcgccgacgcttccgctcgccgaggcaaacgcgaggatcacgccgcgaggatcgagacgc
gggtccctgtcctccatcgtcgacgccccagggagggcggactcgccggcccgcggggag
gacgccgacggcgctgggattcccccggcgtggcgtgaactcgctcggctctcgagggac
gcggcgtcttccggcggatccggcggcgggaaagcggcggcgggagcgtcggtggacccg
ctcgacccgggcctgctctatcgacccgtcgaccggctctcgggaacctgcgacggcgac
ggcgacgacgacgacgacgtcgtcggcgagaagaagacgcgggtctcgtccaggcgagcc
gcgcgcgaggctgacgagcgcaagtccgcccgcctctccgtcggcctctaccacgccgcg
cttcgagcgcttccggcggctgtgcgcgtgtggttcgcggatctcagggataagaacttc
gcgagagccctcgcgtccgccaccgcgtcttgcgtctcccccgcgctgctcgccgcggag
tttgacgccgtggagcgcgcgagcaaagggacgtacggcggcggcggattggacgacgac
gcgggcgagctcacgattaaggcgtcgaggggtaaccgggaggtggttgcgcgttacgac
atcgacgacgcgtgcctggagctggtggttcgacttcccgcgtcgtacccgctcggcgcg
gcggagttggactgcgcgaagcgggtgggcatatcggaggctcgactgcgcaagtggatg
ctgactgtcagctccatccttcagcaccaaaacggcgcagtcgcggagggtctgatgctg
tggaggtcgaacatcgacagggagttcaagggggtggagccgtgcccgatctgctacctg
gtcatccacggcacgaaccaccaaactccgaggctcgtctgcaggcagtgcagcaacaag
ttccacagcgcgtgcctttacaagtggttccagagcagcagcggctcaaagtgtccgctc
tgccaggtgccgtggggaagcaactatcggtag
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