Micromonas commoda: MICPUN_59039
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Entry
MICPUN_59039 CDS
T02695
Name
(RefSeq) predicted protein
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
mis
Micromonas commoda
Pathway
mis03018
RNA degradation
mis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUN_59039
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUN_59039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_59039
03041 Spliceosome [BR:
mis03041
]
MICPUN_59039
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MICPUN_59039
mRNA degradation factors
5'-3' decay
Lsm complex
MICPUN_59039
Spliceosome [BR:
mis03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MICPUN_59039
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
8244375
NCBI-ProteinID:
XP_002502738
JGI:
MicpuN3_59039
UniProt:
C1E7K0
LinkDB
All DBs
Position
6:join(74945..75112,75360..75452)
Genome browser
AA seq
86 aa
AA seq
DB search
MSDDAAPDTGAAKTPADFLKSIRGKPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTAKDK
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgccgcgccagacaccggcgccgccaagaccccggcggacttcctcaag
tccatccgcggtaagcccgtggtggtcaagttgaacagcggtgtggactacaggggcatc
ctcgcgtgcctcgacgggtacatgaacatcgccatggaacagacggaggagtacgtgaac
ggtcagctgaagaacaagtacggcgacgcgttcatccgcggcaacaacgtgctctacatc
tccacggcgaaggacaagtga
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integrated database retrieval system