Micromonas commoda: MICPUN_59225
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Entry
MICPUN_59225 CDS
T02695
Name
(RefSeq) SNF2 super family
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mis
Micromonas commoda
Pathway
mis03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MICPUN_59225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_59225
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_59225
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
MICPUN_59225
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
MICPUN_59225
Chromatin remodeling factors
BAF complex
MICPUN_59225
PBAF complex
MICPUN_59225
GBAF(ncBAF) complex
MICPUN_59225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
AAA_22
EncFtn-like
Motif
Other DBs
NCBI-GeneID:
8244467
NCBI-ProteinID:
XP_002503180
JGI:
MicpuN3_59225
UniProt:
C1E826
LinkDB
All DBs
Position
6:complement(427431..431468)
Genome browser
AA seq
1345 aa
AA seq
DB search
MSGADGRSSPAGPSGAAGGDQGNGQPKHNFKVISGFTKSQIDQLRQQITIFKKIKKGEYD
FDFPGYVPRSATPQLRAHDQPDQSQWTHQHHQQMQQQRQGAGRGGAGRGRQRESGPRPDA
VPARPPPPDVCSLPSWYKRPRGPIYDLAAGYGGMEEDTSAAVKYGYKPVPYECDVRAMVE
DEANRQLETRRKRRLAEVQAQLAAIEDDSTPHAYQQRRRLRVEEKKLRLVELQDSVRAKV
VAEQRELMELGDRAYKKLIKEAEKAKELAAKRDVKRAKEEREAYFKSLTVYRRKISEASS
EAKELVVTRNRQVMKAHERMSRDWMRRQRDALVASQAAAKAKGGGDGTADADYLRRVEAL
KANDMEAYRELLAEAQGREGAVSADDKYASLQEFLEKTEGYLQQLGGKIAALKLTQQRSE
AAAAAAAEAEAAGLTEEEVIAAAEAAADQAAEQGSRDLMDAANAHDGADGKQKYYALAHS
ESEKIIRQPRMLTAGTLRDYQIVSLQWMISLYNNRLNGILADEMGLGKTVQVCALIAYLW
ESKQNYGPHLIIVPNAVIVNWKSEIKLWLKNMSAVYYVGHREERQKLFNQQVMQLKFNVL
VTTYEFIMRDRAKLSKVNWQYIVIDEAQRLKDREGRLARDLDRFRCNRRLLLTGTPLQND
LSELWSLLNLLLPQVFDNAKVFQQWFGDDGKKSAAGAGGEGEDWMEKEKKIIVISRLHQI
LEPFMLRRLVQDVERKLPPKITIAVHCPFSAYQAAVYDWVNKTGTLRVHPTMSKIGLAAR
QNFKGYLALQNRCMELRKVCNHPALNYPTDKGGEWRTGEDLVRTCGKLWMLDRMLIKLRA
AGHRVLLFSTMTKLLDLLETYLKWRMTTPAGEGLEWCRIDGSTALDLREEAITAFNAPGS
KKFIFLLSIRAAGRGLNLQTADTVVVYDPDPNPKNEEQAVARSHRIGQRREVRVLHMEAV
MDEIGAADDDGGIGGSGHGGAGKGGHGAVCSPDDTTWGTGGTRKFTESIESVVRNVVQQQ
KIEMADEVINAGRFDQQTSHAERRETLEKLMQEQATAGARSCASMSLRTLNEKLARTPQE
VELFNEMDLRADLWPGTLTVADETPGWIRYKKADRDEAVSSQATRTKPGLAGEREEAEKA
RAIELASGVQLGRGARNRGGFVPGSYAAANAALSGKDARAVQLRAMKKAAEDKDKDRDED
RDDAKDKDNDKAKEEDKAAAPAAAAAAAVAAEDEATEVVLEDDVESEVTETENEALVEAG
EEVGMDPAELSEEDEEYHKGEDEELAGIDEIGAHIDEDDDMPPSPKFDHPPPADDDGPVP
MDTDEQAPPAAAKKLTFKFSMKAKE
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcggacggcagatcctcgccggctggcccgtccggggcggcgggcggcgac
caagggaacggtcagcccaagcacaacttcaaggtcatctccgggttcacgaagtcgcag
atcgaccagctccggcagcagatcacgatcttcaagaagatcaaaaaaggcgaatacgac
tttgacttcccgggctacgtccccaggtccgcgacgccgcagctgcgggctcacgatcaa
cccgatcaatcccagtggacgcatcaacaccaccagcaaatgcagcagcagaggcagggc
gcgggcaggggcggcgcgggcaggggcaggcagcgggagtcgggaccccggcccgacgcc
gtgcccgcgaggccgcccccgcccgacgtgtgctcgctgccgtcctggtacaaacggccg
cgcgggcccatatacgacctcgcggcggggtacggcggcatggaggaggatacgagcgcg
gcggtcaagtacgggtacaagcccgtcccgtacgagtgcgatgttcgcgccatggtggag
gacgaggccaacaggcagctcgagacgcggcggaagcgccggctcgccgaggtccaagcg
caactcgccgcgatagaggacgacagcaccccgcacgcgtaccaacaacgacgcaggctg
cgcgtggaggagaagaagctgcggctggtggagctccaggacagcgtcagggcgaaggtg
gtggcggagcagcgcgagctgatggagctgggcgacagggcgtacaaaaaactcatcaag
gaagcggagaaggcgaaggagctcgcggcgaagcgcgacgtgaagcgcgcgaaggaggag
agggaggcgtacttcaagtccctcaccgtctaccgcaggaagatctccgaggcttcgtcg
gaggcgaaagagctcgtggtgacgcgcaaccggcaggtgatgaaagcgcacgagaggatg
tcgcgggattggatgcggcgccagcgcgacgcgctcgtcgcttcgcaggctgcggccaag
gcgaaagggggaggcgacggcaccgcggacgccgactacctccgacgcgtggaggcgctc
aaggcgaacgacatggaggcgtacagggagctcctcgccgaggcgcaagggcgcgagggg
gccgtctccgccgatgacaagtacgcgtcgctgcaagaatttttggaaaagactgaggga
tacctgcagcagctcggcggcaagatcgcggcgctcaagctcacgcagcagcgctcggag
gcggcggcggcggccgcggcggaggcggaggcggcgggactcaccgaggaggaggtgatc
gccgccgctgaagccgccgcggatcaagccgcggagcagggatctcgggacctgatggac
gccgcaaacgctcacgacggcgccgacggaaagcaaaagtactacgcgctggcgcactcg
gagagcgagaaaatcatcaggcagccgcgcatgctgaccgctgggaccctccgcgactac
cagatcgtctcgcttcagtggatgatttcactgtacaacaacaggctgaacggcatcctc
gccgatgagatgggcctgggcaagacggttcaggtttgcgccctgatcgcgtacctgtgg
gagagcaagcaaaactacggcccgcacctgatcatcgtgcccaacgcggtcatcgtcaac
tggaagagcgagatcaagctttggctcaagaacatgagcgcggtgtactacgtcgggcac
agagaggaaagacaaaagctgttcaaccagcaggtgatgcagctcaagtttaacgtgctc
gtcaccacgtacgagttcatcatgcgcgaccgcgcgaagctgagcaaggttaactggcag
tacatcgtaatcgacgaggcgcagaggctcaaggatagagaaggtcggctggcaagggac
cttgaccggttccgttgcaaccgcaggcttttgctcacgggcacgccactgcagaacgat
ctcagcgagctctggtcgctgctaaacctcctgttaccgcaagtgttcgacaacgcaaag
gtgttccagcagtggttcggagacgatggcaagaaatcggcggctggcgcgggaggcgag
ggcgaggactggatggagaaggagaagaaaatcatcgtcatctcccgtcttcaccagatc
cttgagccgttcatgttgcggcgcctcgttcaggacgtggagcgtaagctcccgccaaag
atcactatcgcggtgcactgcccgttcagtgcctaccaggctgcggtgtacgactgggtg
aacaagacgggtacgctgagggtgcacccaacgatgtccaagattggtctcgctgcaaga
caaaacttcaagggatatctcgcgctgcagaacagatgcatggagctgcggaaggtgtgc
aaccacccggctctgaactaccccaccgacaagggcggcgagtggagaacgggggaggat
ctggtgcgaacctgcggcaagctctggatgctggaccgaatgcttatcaagctccgggcc
gccgggcacagggtcctgctcttctccaccatgaccaaactcctcgacctgttggaaacg
tacctcaagtggcgcatgaccacacccgcgggtgagggcttggagtggtgccgcatcgac
gggagcaccgcgctggacctacgggaggaggccatcaccgcgttcaacgcgccgggttcc
aaaaagtttatcttcctcctctccatccgcgccgccggccgaggtctcaacctccagacc
gcggacaccgtggtggtttacgacccggacccgaacccgaagaacgaggagcaggcggtc
gcgaggtcgcatcgcatcggtcagcggcgggaggtgcgggtgcttcacatggaagccgtc
atggacgagattggcgcggcggatgacgacgggggcatcggtggatccggccacggcgga
gcgggtaagggcggacacggcgcggtgtgctcccccgacgacaccacgtgggggacgggc
gggacgcgtaagttcaccgagagtatcgagagcgtggttcgcaacgtggtgcagcagcag
aaaatcgagatggccgacgaggtcatcaacgcgggccgattcgaccagcaaacctcccac
gcggagcgcagggagaccctcgagaagctcatgcaggagcaggccacggccggtgcgcgg
tcctgcgcgtccatgtcgctcaggaccctgaacgaaaagctcgcgaggacgccgcaggag
gttgagctgttcaacgagatggacctgcgggcagacctgtggccgggcaccctcaccgtc
gcggacgagaccccgggctggatccggtacaaaaaagccgacagggacgaggccgtctcc
tcccaggccacgcgcaccaagcccggtctggcgggcgagcgcgaggaggctgagaaggcg
agagcgatcgagctcgcgagcggcgtccagctgggacgaggcgcgaggaaccgcggcggg
ttcgtgccgggatcgtacgcggcggcgaacgcggcgctctcgggcaaggacgcgagggcc
gtgcagctccgcgcgatgaagaaagcggcggaagacaaggacaaggacagggacgaggac
agggacgatgccaaggacaaggacaatgacaaggccaaggaagaggacaaggcggccgca
cccgcggcggcggcggcggccgctgtcgccgcggaggatgaggccaccgaggttgtcctg
gaggacgacgtggagtctgaggtgacggagacggagaacgaggcgttggtcgaagccggc
gaggaagttggcatggaccccgcggagctcagcgaggaggacgaggaataccacaagggg
gaggacgaggagttggcggggatcgacgagattggcgcgcacatagacgaggacgacgac
atgccgccgtcgcccaagtttgaccacccgccgcccgcggatgacgacggaccggtgccg
atggacacggacgagcaggcaccgcccgcggctgcgaagaagctcacctttaagttctcg
atgaaggcgaaggagtga
DBGET
integrated database retrieval system