KEGG   Micromonas commoda: MICPUN_59225
Entry
MICPUN_59225      CDS       T02695                                 
Name
(RefSeq) SNF2 super family
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mis  Micromonas commoda
Pathway
mis03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    MICPUN_59225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mis03021]
    MICPUN_59225
   03036 Chromosome and associated proteins [BR:mis03036]
    MICPUN_59225
Transcription machinery [BR:mis03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     MICPUN_59225
Chromosome and associated proteins [BR:mis03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     MICPUN_59225
  Chromatin remodeling factors
   BAF complex
    MICPUN_59225
   PBAF complex
    MICPUN_59225
   GBAF(ncBAF) complex
    MICPUN_59225
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD QLQ AAA_22 EncFtn-like
Other DBs
NCBI-GeneID: 8244467
NCBI-ProteinID: XP_002503180
JGI: MicpuN3_59225
UniProt: C1E826
LinkDB
Position
6:complement(427431..431468)
AA seq 1345 aa
MSGADGRSSPAGPSGAAGGDQGNGQPKHNFKVISGFTKSQIDQLRQQITIFKKIKKGEYD
FDFPGYVPRSATPQLRAHDQPDQSQWTHQHHQQMQQQRQGAGRGGAGRGRQRESGPRPDA
VPARPPPPDVCSLPSWYKRPRGPIYDLAAGYGGMEEDTSAAVKYGYKPVPYECDVRAMVE
DEANRQLETRRKRRLAEVQAQLAAIEDDSTPHAYQQRRRLRVEEKKLRLVELQDSVRAKV
VAEQRELMELGDRAYKKLIKEAEKAKELAAKRDVKRAKEEREAYFKSLTVYRRKISEASS
EAKELVVTRNRQVMKAHERMSRDWMRRQRDALVASQAAAKAKGGGDGTADADYLRRVEAL
KANDMEAYRELLAEAQGREGAVSADDKYASLQEFLEKTEGYLQQLGGKIAALKLTQQRSE
AAAAAAAEAEAAGLTEEEVIAAAEAAADQAAEQGSRDLMDAANAHDGADGKQKYYALAHS
ESEKIIRQPRMLTAGTLRDYQIVSLQWMISLYNNRLNGILADEMGLGKTVQVCALIAYLW
ESKQNYGPHLIIVPNAVIVNWKSEIKLWLKNMSAVYYVGHREERQKLFNQQVMQLKFNVL
VTTYEFIMRDRAKLSKVNWQYIVIDEAQRLKDREGRLARDLDRFRCNRRLLLTGTPLQND
LSELWSLLNLLLPQVFDNAKVFQQWFGDDGKKSAAGAGGEGEDWMEKEKKIIVISRLHQI
LEPFMLRRLVQDVERKLPPKITIAVHCPFSAYQAAVYDWVNKTGTLRVHPTMSKIGLAAR
QNFKGYLALQNRCMELRKVCNHPALNYPTDKGGEWRTGEDLVRTCGKLWMLDRMLIKLRA
AGHRVLLFSTMTKLLDLLETYLKWRMTTPAGEGLEWCRIDGSTALDLREEAITAFNAPGS
KKFIFLLSIRAAGRGLNLQTADTVVVYDPDPNPKNEEQAVARSHRIGQRREVRVLHMEAV
MDEIGAADDDGGIGGSGHGGAGKGGHGAVCSPDDTTWGTGGTRKFTESIESVVRNVVQQQ
KIEMADEVINAGRFDQQTSHAERRETLEKLMQEQATAGARSCASMSLRTLNEKLARTPQE
VELFNEMDLRADLWPGTLTVADETPGWIRYKKADRDEAVSSQATRTKPGLAGEREEAEKA
RAIELASGVQLGRGARNRGGFVPGSYAAANAALSGKDARAVQLRAMKKAAEDKDKDRDED
RDDAKDKDNDKAKEEDKAAAPAAAAAAAVAAEDEATEVVLEDDVESEVTETENEALVEAG
EEVGMDPAELSEEDEEYHKGEDEELAGIDEIGAHIDEDDDMPPSPKFDHPPPADDDGPVP
MDTDEQAPPAAAKKLTFKFSMKAKE
NT seq 4038 nt   +upstreamnt  +downstreamnt
atgagcggcgcggacggcagatcctcgccggctggcccgtccggggcggcgggcggcgac
caagggaacggtcagcccaagcacaacttcaaggtcatctccgggttcacgaagtcgcag
atcgaccagctccggcagcagatcacgatcttcaagaagatcaaaaaaggcgaatacgac
tttgacttcccgggctacgtccccaggtccgcgacgccgcagctgcgggctcacgatcaa
cccgatcaatcccagtggacgcatcaacaccaccagcaaatgcagcagcagaggcagggc
gcgggcaggggcggcgcgggcaggggcaggcagcgggagtcgggaccccggcccgacgcc
gtgcccgcgaggccgcccccgcccgacgtgtgctcgctgccgtcctggtacaaacggccg
cgcgggcccatatacgacctcgcggcggggtacggcggcatggaggaggatacgagcgcg
gcggtcaagtacgggtacaagcccgtcccgtacgagtgcgatgttcgcgccatggtggag
gacgaggccaacaggcagctcgagacgcggcggaagcgccggctcgccgaggtccaagcg
caactcgccgcgatagaggacgacagcaccccgcacgcgtaccaacaacgacgcaggctg
cgcgtggaggagaagaagctgcggctggtggagctccaggacagcgtcagggcgaaggtg
gtggcggagcagcgcgagctgatggagctgggcgacagggcgtacaaaaaactcatcaag
gaagcggagaaggcgaaggagctcgcggcgaagcgcgacgtgaagcgcgcgaaggaggag
agggaggcgtacttcaagtccctcaccgtctaccgcaggaagatctccgaggcttcgtcg
gaggcgaaagagctcgtggtgacgcgcaaccggcaggtgatgaaagcgcacgagaggatg
tcgcgggattggatgcggcgccagcgcgacgcgctcgtcgcttcgcaggctgcggccaag
gcgaaagggggaggcgacggcaccgcggacgccgactacctccgacgcgtggaggcgctc
aaggcgaacgacatggaggcgtacagggagctcctcgccgaggcgcaagggcgcgagggg
gccgtctccgccgatgacaagtacgcgtcgctgcaagaatttttggaaaagactgaggga
tacctgcagcagctcggcggcaagatcgcggcgctcaagctcacgcagcagcgctcggag
gcggcggcggcggccgcggcggaggcggaggcggcgggactcaccgaggaggaggtgatc
gccgccgctgaagccgccgcggatcaagccgcggagcagggatctcgggacctgatggac
gccgcaaacgctcacgacggcgccgacggaaagcaaaagtactacgcgctggcgcactcg
gagagcgagaaaatcatcaggcagccgcgcatgctgaccgctgggaccctccgcgactac
cagatcgtctcgcttcagtggatgatttcactgtacaacaacaggctgaacggcatcctc
gccgatgagatgggcctgggcaagacggttcaggtttgcgccctgatcgcgtacctgtgg
gagagcaagcaaaactacggcccgcacctgatcatcgtgcccaacgcggtcatcgtcaac
tggaagagcgagatcaagctttggctcaagaacatgagcgcggtgtactacgtcgggcac
agagaggaaagacaaaagctgttcaaccagcaggtgatgcagctcaagtttaacgtgctc
gtcaccacgtacgagttcatcatgcgcgaccgcgcgaagctgagcaaggttaactggcag
tacatcgtaatcgacgaggcgcagaggctcaaggatagagaaggtcggctggcaagggac
cttgaccggttccgttgcaaccgcaggcttttgctcacgggcacgccactgcagaacgat
ctcagcgagctctggtcgctgctaaacctcctgttaccgcaagtgttcgacaacgcaaag
gtgttccagcagtggttcggagacgatggcaagaaatcggcggctggcgcgggaggcgag
ggcgaggactggatggagaaggagaagaaaatcatcgtcatctcccgtcttcaccagatc
cttgagccgttcatgttgcggcgcctcgttcaggacgtggagcgtaagctcccgccaaag
atcactatcgcggtgcactgcccgttcagtgcctaccaggctgcggtgtacgactgggtg
aacaagacgggtacgctgagggtgcacccaacgatgtccaagattggtctcgctgcaaga
caaaacttcaagggatatctcgcgctgcagaacagatgcatggagctgcggaaggtgtgc
aaccacccggctctgaactaccccaccgacaagggcggcgagtggagaacgggggaggat
ctggtgcgaacctgcggcaagctctggatgctggaccgaatgcttatcaagctccgggcc
gccgggcacagggtcctgctcttctccaccatgaccaaactcctcgacctgttggaaacg
tacctcaagtggcgcatgaccacacccgcgggtgagggcttggagtggtgccgcatcgac
gggagcaccgcgctggacctacgggaggaggccatcaccgcgttcaacgcgccgggttcc
aaaaagtttatcttcctcctctccatccgcgccgccggccgaggtctcaacctccagacc
gcggacaccgtggtggtttacgacccggacccgaacccgaagaacgaggagcaggcggtc
gcgaggtcgcatcgcatcggtcagcggcgggaggtgcgggtgcttcacatggaagccgtc
atggacgagattggcgcggcggatgacgacgggggcatcggtggatccggccacggcgga
gcgggtaagggcggacacggcgcggtgtgctcccccgacgacaccacgtgggggacgggc
gggacgcgtaagttcaccgagagtatcgagagcgtggttcgcaacgtggtgcagcagcag
aaaatcgagatggccgacgaggtcatcaacgcgggccgattcgaccagcaaacctcccac
gcggagcgcagggagaccctcgagaagctcatgcaggagcaggccacggccggtgcgcgg
tcctgcgcgtccatgtcgctcaggaccctgaacgaaaagctcgcgaggacgccgcaggag
gttgagctgttcaacgagatggacctgcgggcagacctgtggccgggcaccctcaccgtc
gcggacgagaccccgggctggatccggtacaaaaaagccgacagggacgaggccgtctcc
tcccaggccacgcgcaccaagcccggtctggcgggcgagcgcgaggaggctgagaaggcg
agagcgatcgagctcgcgagcggcgtccagctgggacgaggcgcgaggaaccgcggcggg
ttcgtgccgggatcgtacgcggcggcgaacgcggcgctctcgggcaaggacgcgagggcc
gtgcagctccgcgcgatgaagaaagcggcggaagacaaggacaaggacagggacgaggac
agggacgatgccaaggacaaggacaatgacaaggccaaggaagaggacaaggcggccgca
cccgcggcggcggcggcggccgctgtcgccgcggaggatgaggccaccgaggttgtcctg
gaggacgacgtggagtctgaggtgacggagacggagaacgaggcgttggtcgaagccggc
gaggaagttggcatggaccccgcggagctcagcgaggaggacgaggaataccacaagggg
gaggacgaggagttggcggggatcgacgagattggcgcgcacatagacgaggacgacgac
atgccgccgtcgcccaagtttgaccacccgccgcccgcggatgacgacggaccggtgccg
atggacacggacgagcaggcaccgcccgcggctgcgaagaagctcacctttaagttctcg
atgaaggcgaaggagtga

DBGET integrated database retrieval system