Micromonas commoda: MICPUN_59230
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Entry
MICPUN_59230 CDS
T02695
Name
(RefSeq) predicted protein
KO
K10754
replication factor C subunit 1
Organism
mis
Micromonas commoda
Pathway
mis03030
DNA replication
mis03410
Base excision repair
mis03420
Nucleotide excision repair
mis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MICPUN_59230
03410 Base excision repair
MICPUN_59230
03420 Nucleotide excision repair
MICPUN_59230
03430 Mismatch repair
MICPUN_59230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mis03032
]
MICPUN_59230
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_59230
DNA replication proteins [BR:
mis03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
MICPUN_59230
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
MICPUN_59230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
PTCB-BRCT
AAA_18
AAA_22
RuvB_N
nSTAND3
RNA_helicase
AAA_assoc_2
AAA_17
AAA_28
AAA_5
AAA_16
AAA_33
DDE_Tnp_IS66
Zeta_toxin
AAA_14
RsgA_GTPase
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
8244112
NCBI-ProteinID:
XP_002502824
JGI:
MicpuN3_59230
UniProt:
C1E831
LinkDB
All DBs
Position
6:437774..440527
Genome browser
AA seq
917 aa
AA seq
DB search
MPADIRSFFGGGPKKPAGDAAAKPKEEKLEEPAATVLPKKAKAEEPKPDVDMVDLTDDAP
APKTTAKRKTVVDDVREPRSVPQTSRSTSNVFVVYFSPIAPTHVMFLRRQPSRALHHTQD
DDFVPDKSPPSAKKAKKTPSKKTPTKKTPAKKEPVKELPKPPGYPKEESELKFSVIQGDQ
AWGYNDTRAEPPNKGVKIAPRGPNDCLEGVTVVVSGVLDSLEREEAEDYVKRHGGKVTST
VSGKTTYLLVGMDCGKSKYNKAKQHGTTLIDEDGLFAMVAACGEKPAVEEIKPEPAPAPA
AAKSPVPTPKPSPKPSAAAPTAPPPAPVKKAKGEDETPLWVNKYKPNQPAQLIGNGAKIA
ELRKFLTTWEDVHLKGPEVKGKDKPMKSVLISGAPGVGKSSAATIIAKQLGFEVVEVNAS
DTRGASGKDVKEGVGGKASNAIREMVTNRAVNFFTGKPKKMCLIMDEVDGMSGGDRGGVQ
ELIACIKISKIPIICICNDKYNQKLKSLQNYTMDLPFVKPTKVQILKRMLKIAQDEGITM
SEAAMEALIETCSNDIRQIINQLQMRRLTKQTFEFDDVKSLAKKDLDMGPFTAMDKLTNR
DAGLLTVTERLNLVFQDSDLIPLFVQENYLQYRPFAARNDAERLQIVANAATCISHGDIM
NRSVRMKQNWGLMPYANMVSSVMPASMVRGGRETFHEYERNFNRFPGWLGKNSSAGKMKR
LLHEVHSHAMTSNAFKADSAGMRCDYLPLIKDLTSRPMWEPPQGKGKEGIEDVMEIMNSY
CLTRQDWESIYDLCKFPKGVGPEFVDVLKPIATATKTAFTRACNAGSRTVHSGILVEDFK
KKRGGKKAAANEDDGMDEGEDEGEGGGSEEEDNPFDNAPKGPKLSAKRLAAIGFVAKDDG
KKKKAPTKKKAAASKKK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggatatccgttcgttttttgggggtggccccaagaaacccgcgggggacgca
gcggccaagcccaaggaggagaagctggaggagcccgccgcgacggtgctgccgaagaag
gcgaaggcggaggagcccaagccggacgtcgacatggtcgacctgacggacgacgcaccg
gctccgaagaccacggcaaagcgcaagacggtcgtcgacgatgtaagagagccccgatcc
gtgccccaaacctccagatccacgtcgaacgtgttcgttgtttatttttccccgatcgcc
ccgacgcatgttatgttccttcgccgacagccctcacgcgcccttcaccacacacaggac
gatgatttcgtcccagataagtccccgccctcggccaagaaggcgaagaagacgccgtcg
aagaagaccccgacgaagaagaccccggcgaagaaggaacccgtcaaagagctcccaaag
ccaccgggctaccccaaggaggagtccgagctcaagttctctgtcatccagggggaccag
gcgtgggggtacaacgacaccagggccgaaccccccaacaagggagtcaagatcgcgccc
aggggaccgaacgattgcctcgagggcgtcaccgtcgtcgtctccggcgtactcgacagc
ctcgagcgagaggaagccgaagattacgtcaagcgacacggcggaaaggtcacgtcgacg
gtcagcggaaagaccacctacctgctcgtgggaatggactgcggcaagtccaagtacaat
aaggccaagcaacacggaaccacgctcatcgatgaggacggcttgttcgccatggtggcg
gcgtgcggggagaagccggcggtggaggagataaaaccagagccggctcccgcgcccgcc
gccgcgaagtccccggtgcccacgcccaagccctcccccaagccctccgccgcggctccc
accgccccgccgccggcgcccgtcaagaaggccaagggcgaggacgagaccccactctgg
gtcaacaagtacaaacccaatcaacccgctcagctcatcggcaacggcgctaaaatcgcc
gagcttcgcaagtttctcaccacctgggaagacgtccacctcaagggaccagaggtcaag
ggcaaggataaacccatgaagtcggtgttgatctccggcgcgcccggtgtgggcaagagc
agcgccgcgacgatcatcgcgaagcagctcggctttgaggttgtggaggtcaacgcctcg
gatacgagaggcgccagcgggaaggatgtgaaagagggcgtcggtggcaaggcaagcaac
gcgatacgcgagatggtgactaaccgtgcggtcaacttcttcaccgggaagcccaagaag
atgtgcctgatcatggacgaagttgacgggatgagcggcggcgaccgcggcggcgtgcag
gaactcatcgcgtgcatcaagatcagcaagatccccatcatctgcatctgcaacgacaag
tacaaccagaagctgaagagcctccagaactacaccatggacctacccttcgtcaagcct
accaaggtccagatactcaagcgcatgctcaagatcgcccaggatgaggggatcaccatg
agtgaagctgcgatggaggctctgatcgagacatgcagcaacgacatccgccagatcatc
aaccagctgcagatgcgccgcctcaccaagcaaaccttcgagttcgacgatgtcaagtcc
ctcgcaaagaaggacctcgacatgggtccgttcaccgcgatggataagctcacaaaccgc
gatgcgggcctgctgactgtcaccgagcggctaaacctcgtgttccaagactccgacttg
atacccctgttcgttcaggagaactatctacaatacaggcctttcgccgcgaggaacgac
gccgaacgactgcagatcgtcgcgaatgccgcgacgtgcatatcacacggcgacatcatg
aacaggtccgttcgcatgaaacaaaactggggcttgatgccctacgccaacatggtttcg
tctgttatgcccgcgagcatggtgcgcggtggccgagaaaccttccacgagtacgagcgg
aacttcaacaggttcccgggctggctcggcaagaactcgtccgcgggtaagatgaagcgg
ctgctccacgaggtacattcgcacgcgatgacctccaatgccttcaaggcggacagcgcc
ggcatgcgatgcgactacctcccgttgatcaaggatttaacatcccggccgatgtgggag
ccgccgcagggtaaagggaaggagggcatcgaggacgtcatggagatcatgaactcgtac
tgcctcacgcgccaggactgggagagcatatacgacctttgcaagtttcccaagggtgtc
gggccggagtttgtggacgtgttgaagccgattgccaccgcgaccaagacggcgttcacc
agggcgtgcaatgcaggcagccgaacggtgcacagcggcatcctggtcgaggatttcaag
aagaagagaggagggaagaaggcggccgcgaacgaggacgacggcatggatgagggtgag
gacgagggtgagggcggcgggagcgaagaggaggataacccgtttgacaacgcacccaag
ggtcccaagctgtcggcaaagagactcgccgccatcgggttcgtggccaaggacgacggg
aagaagaagaaggcgccgactaagaagaaggctgcggcgtcgaagaagaaatag
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integrated database retrieval system
