Micromonas commoda: MICPUN_59588
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Entry
MICPUN_59588 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14328
regulator of nonsense transcripts 3
Organism
mis
Micromonas commoda
Pathway
mis03013
Nucleocytoplasmic transport
mis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MICPUN_59588
03015 mRNA surveillance pathway
MICPUN_59588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_59588
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MICPUN_59588
mRNA cycle factors
P-body specific factors
MICPUN_59588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
8244646
NCBI-ProteinID:
XP_002503001
JGI:
MicpuN3_59588
UniProt:
C1E934
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All DBs
Position
6:1170019..1171188
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AA seq
389 aa
AA seq
DB search
MATRRTKAVCRNLPPDLPESAFVRALAAEGFAGRYGYLDYARGAWKQRLPVPSVAWIQFA
DEQALFDFRGAFGGRIFRAGERDDAEERAGGESATENAEGDGEPAPEEGAPAATKNTAVP
EGMEEWRARVEYAPNQKTPRGKQHRDKREGTIGKDAAYLQFVKDLEASMEAPPAPTMTAE
QALERREAAERAATGKSDFKVSALLRYVMEQKKKEMDHRKAAKAAAKAAKGGKKAAGAGA
KDAKPSRRDANKRKKGTAGAQTQPAPKTLPSPKPAPSGASDGNKSKQDGGGKKHPPEPAQ
QRKPTAPAPEPKQGKAKALKQKAPSKPNKPPAPDGGGGAKTADAAGAGGRGGGAGAAGGR
GGGRGGRGGRGGGGKSKPKSNVQVFRSDS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccggcggaccaaggcggtgtgccgcaaccttcccccggacctcccagagtct
gcgttcgtgcgcgctctcgcagcggaggggttcgcgggtcgatacgggtacttggactac
gcgcgtggggcttggaagcagaggctgccggtgccgtccgtggcttggatccaattcgcc
gacgagcaggcgctgttcgactttaggggcgcgttcggcggccggatcttccgcgcgggc
gagagggacgatgccgaggagcgcgccggcggcgagtccgcgacggaaaacgcggagggc
gacggcgaacccgcgccggaggagggggcgcccgcggcgacgaaaaacacagctgtgccc
gaggggatggaggagtggcgcgcgcgcgtcgagtacgcgcccaatcagaagacgccgcgg
ggcaagcagcatcgcgacaagcgcgagggtaccatcggaaaggacgccgcgtacctccag
ttcgtgaaggacctggaggcgtcgatggaggcgccgccggccccgacgatgacagcggag
caggcgctggagcgaagggaagcggcggagcgcgcggccacgggcaaatcggactttaag
gtatccgcgctgctgaggtacgtcatggagcagaagaagaaggagatggaccatcgaaag
gccgcgaaggcggcggcgaaggcggcgaagggcggtaagaaggccgccggcgcgggagcc
aaggacgccaagccgagcaggagagacgccaacaagcggaaaaagggaacagctggcgcc
caaacacagccggcgcccaagaccctgccgtcgccgaagcccgccccgagcggcgcctcc
gacggcaacaagtcgaagcaggacggcggggggaagaaacatccgccggaacccgcgcag
cagcggaagccgaccgcgcctgccccggagcccaagcagggcaaggctaaggcgctcaag
caaaaggcgccgagcaagccaaacaagccgccggctcccgacggcgggggcggggccaag
accgcggacgccgccggcgccgggggacgcggcgggggcgcgggggcggcggggggacgc
ggcgggggacgcggcgggcgcggggggcgcggcggcggggggaagtcgaagccgaagtcc
aacgtgcaggtgttcaggagcgacagctag
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