Micromonas commoda: MICPUN_59845
Help
Entry
MICPUN_59845 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14312
nuclear pore complex protein Nup155
Organism
mis
Micromonas commoda
Pathway
mis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MICPUN_59845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_59845
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MICPUN_59845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
HTH_TIMELESS
Motif
Other DBs
NCBI-GeneID:
8244776
NCBI-ProteinID:
XP_002503837
JGI:
MicpuN3_59845
UniProt:
C1E9U7
LinkDB
All DBs
Position
7:complement(join(274070..279316,279456..279583,279742..279805))
Genome browser
AA seq
1812 aa
AA seq
DB search
MYAPQDVGLVARPIEGGEVQSSAAEQMQDAARLVTNLQTESDGVDLVTLLRETPREAYSF
QQLGWPSEIAATRTSELPAVVLERYSTRQSVCFCGVLPEINRAWATVDNALFLWRLDRPD
DVPVEYSGEEQAIVAVGLAKPKQGVFLRTIDYVLAVATTVEVVLVGCAFGDGREGSTLDD
ELTLHALNYSCTTDDVVAKDIASTDGGRIFFAGDDEALYEIEYSSSDTWRQRRCRKVCHH
SALPRMLPSILRLRAPDPLRQVLVDEHRCALYTRSESGVVSVFDLGANCADPPRKVAEVR
DVAAAAQMARGGGGLFNQYGGYGGGGSYGVGGGSYGGGGYGGAYGGGAQAQKDGQSQAQK
GRRLAHISVVSPSESSVVTLVAVCADGRRVYFTTLPAEGSRALGYGGSSYGSQNGSGTRR
GGGVKEHRSVPAACRLAVVQSREPLPQGSAQRGMSSAQALRATTTVRPLEVEAAFYRDGL
MLLCDAADRDEDARLFMASRDLALPPHLQMDAHPIGQVGGSPAPSIHGGLHSPSARRDGG
LGSDLDRGNPYGSPLNIGRGGGNGGVPQGGGTHGLMASPGSMASGGAYQGVGAGAQSASA
IRSLREIVTPQPLQGRAASAVGSVGEVPPPLGVLRDLDPPYPPGAPRELSSRPAPLRSEL
ATQHVAPRRKFVVVTNAGVVTVEKSRPLDALAKILASDVHESLVHFFKSYGQAEAATMCL
AVAVGALGSGASDLDRQQHQAGHHNGGTPGGTPGGRVEFGGSPRVPPSVLGTPQGAFGGG
AGAGVDGYGGSLFHGAGLADRARRALEDPRLTGEPRVDEDLNGFGVDAAGGGGQFDMGRA
IVQPQLHYSGVHRALYTYAARLLAPTWERPLWVAVTHPNKNDSSGGVRGMGKNGGKNGVA
PNQPPGKGLGLGLGPNQPPLRDAVVAGAADGGGVAGAAAAAAGWLGGILRPDPTAAAPVA
CTIPADVLASLERRLAPLEEFLSRRRPRVAPSERSRRAQNGSHLLGPPARQRRRIDGPAG
ALRAEERSIAALRGLVRRAREAAALLRCLHEEDFERDVGAWLGVEIRQHMCGLTLRSFVS
TPEGAATASRLVEALMARRTRADSSSLDALATKLQAAAPLFFDGDARTFYRARELLQGAR
DARDARDFRACAETTAASLEMLLGVPLAGDPTAVMAELADLRCFHGLAALPLAAAAAAAD
AAAAGDGVGSLGAMDAGGPVNASPRTFGATNSGVHSGALDGSLGNIMRNGANGATDPEEC
FEYVCVAIRALATGVADPGSPPGSLGAVCASLPPDERASGLAALLKRCAQASSPAAASAA
AAAVKAAAANAAAAAAAAAAASPQARQTHGALIAPSPSVAAVAAATPAEVAGASAAGDGA
FIRRVYAELVALGRDEDLLELPAGPLEQHLAERGAFETARQGGALTRDESRHLELLARLY
ARRERHGLAAQVFFALAERVAGADCAVSLDERAALLDLALRHAKSPGAHAELAGGAADAQ
VETLEGKIKVLEFQRRLHATFSERARRGGADADRDARLAAELERELRPLSDMYNDFAKPC
DMHDVCLEMLHFSRYRDADGAVARGLWDALLSSAASSVRVSSPQDDRAALFAACNAARAL
GPKLFPSDVAFPVAHVALKLELMAGGLWGGVNAAVVGSEDVGAVADAMLAATGDSPEAIH
AAYDSLLATPASRAQHGSIRLVQSEQLQTPALRLRLLRSALRVLRRWDEKIRSDAGLAGG
FGGGGAGNGAANGGGFGAFGAGQGAHVRAALGDVCVGYAGEARRLLQVPTSAQGAAEALA
EEFDALGKRLIG
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgcctcaggatgtcgggctcgtcgctcgcccgatcgagggtggggaagtccag
agctccgcggcggagcagatgcaggacgccgcgcgtctggtgaccaacctccagaccgag
agcgacggcgtggacctcgtcacgctgctcagggagaccccgcgggaggcgtactccttc
cagcaactagggtggccgtccgagattgcggcgacgcgcacgagcgagctcccggccgtc
gtcttggagcggtactcgacgcgccagtctgtgtgcttctgcggcgtcctgcccgagatc
aatcgcgcctgggccaccgtggacaacgcgctcttcctctggcgcctggacaggcccgac
gacgtgcccgtggagtacagcggcgaggagcaggccatcgtcgccgtgggcctcgccaag
cccaaacaaggcgtcttcctccgcaccatcgactacgtcctcgcggtggctaccaccgtg
gaggttgtcctcgtgggatgcgcattcggcgacggccgcgagggatcgacgttggacgac
gagctcaccctccacgccctcaactacagctgcaccacggacgacgtcgtcgccaaggac
atcgcgagcaccgacggcggacgcatcttcttcgccggcgacgacgaggctctgtacgag
attgaatactcctcgtcggacacgtggcggcagcgacggtgccgaaaagtgtgccaccac
agcgcgctgccccgcatgttacccagcatcctgcgcctgagggcgccggacccgctgcgg
caggtgctggtggacgagcacaggtgcgccttgtacacgagatccgaatcgggcgtcgtc
tccgtctttgacctcggcgccaattgcgccgatccccccaggaaagtcgcggaggttcgc
gacgtcgccgcggctgcgcagatggcgcgcggcggcggcgggctgttcaaccagtacggg
ggatacggcggcgggggatcgtacggcgtcggggggggttcgtacggcggcgggggctac
gggggtgcctacggcggcggcgcgcaggcgcagaaggatggccagtcgcaagcgcagaag
ggccgcagactggcgcacatatccgtcgtgtccccgtccgagtccagcgtcgtcaccttg
gtcgcggtgtgcgcggacggacggcgcgtgtacttcaccacgctcccggcggagggctct
cgggcgctcggctacggcggatcttcttacggctctcaaaacgggtcggggacccgccgc
ggcggcggtgtcaaggagcaccgctcggttcccgccgcgtgccgcctcgccgtggtccag
tcccgcgagccgctgccgcagggaagcgcgcagcgcggcatgagcagcgcccaggcgctg
cgcgccaccaccaccgttcgcccgctcgaggttgaggcggcgttttaccgggacgggctc
atgctcctgtgcgacgccgcggaccgggacgaggacgcgaggctcttcatggcgtcgcgg
gacctcgcgctaccgccgcacctgcagatggacgcgcacccgatcggccaggttggtggt
tccccggcgccttccatccacggaggccttcactcgccgtcggcgcgcagggacggggga
ctcggttcggatctcgaccgcggtaacccctacggctccccgctcaacatcgggaggggg
gggggcaacgggggggtcccacagggcggcggtacccacggcttgatggcatccccgggt
tcgatggcgtccggcggcgcgtaccagggcgtgggcgcgggtgcgcagagcgcgtcggcg
attcgatcgcttcgcgaaatcgtcaccccgcagccgctccagggccgagccgccagcgcc
gtggggtccgtcggcgaggttcccccgccgctgggcgttcttcgggacctggacccgccg
tacccgccgggggcgccgagggagctgtcgtcccgcccggcccctcttcgaagcgaactc
gcgacgcaacacgtcgctccccggcgcaaattcgtcgtggtgaccaacgccggcgtcgtc
accgtggaaaagtcgaggcccctggacgcgttggccaagattctcgccagcgacgtgcac
gagtccctcgtgcacttcttcaagtcgtacggccaggcggaggctgcgacgatgtgcctc
gccgtcgccgtcggcgcgctcggctccggggcttcggatcttgatcgccagcagcatcag
gcgggtcatcataacggcggcacccccggcggcaccccgggagggagggtcgagtttggc
ggttccccacgcgtgcccccgtccgtcctcggcaccccgcagggtgcctttggcggcggc
gcgggcgcgggcgtcgacggctacggcggctctctctttcacggcgccgggctcgccgat
cgcgccaggcgggcgctcgaggacccgaggctcaccggcgagccgcgcgtcgacgaggac
ctcaacgggttcggcgtggacgccgcgggcggcggcggacagttcgacatgggccgcgcc
atcgtccagccgcagttgcactacagcggcgtccatcgagcgctgtacacgtacgcggcg
aggctgctggcgcccacgtgggagcgccctctgtgggtcgccgtgacacacccgaacaag
aacgactcgtcaggaggtgtgcgcgggatgggcaagaacggcggcaagaacggcgtcgcc
ccgaaccaacccccgggcaagggtttagggttagggttaggaccgaaccaacccccgttg
cgcgacgcggtggtcgccggcgcggcggacggcggcggcgtcgcgggcgctgccgccgca
gccgcgggctggctcggcgggatcctccgccccgacccgaccgccgccgcgcccgtcgcg
tgcacgatcccggcggacgtcctcgccagcctggagcgccgactggcgccgctcgaagag
tttctctcgaggcgacgacctcgagttgctccgtcggaaaggtcgaggagagctcaaaac
ggtagccacctcctgggaccgcccgcgaggcaacggcgtcgaatcgacggacccgccggc
gcgctgcgggccgaggaacggtccatcgccgccctccgcggcctcgtccgccgcgctcgc
gaagccgccgcgctcctccgttgcctccacgaggaggactttgaacgcgacgtcggcgcg
tggctcggtgtggagattcgtcaacacatgtgcgggctcacgctccggtcgttcgtgagc
acccccgagggcgccgccacggcgtccaggctcgtcgaggcgctcatggcgcgacggacc
cgcgcggattcgtcctcgttggatgcgctcgcgactaaactgcaggcggcggcgccgctc
ttcttcgacggcgacgcgaggacgttttaccgggcgcgcgagttgctacaaggcgcgagg
gacgcgagggacgcgagggactttcgcgcgtgcgcggagacgacggcggcgtcgctggag
atgctcctcggcgtgcccctcgcgggtgatcccaccgcggttatggcggagctcgccgac
cttcggtgctttcacggcctcgccgcgctgccgctcgcggcggcggcggcggcggcggac
gcggcggcggcgggcgacggcgtgggaagcctcggcgcgatggacgccgggggacccgtc
aacgcgtcgcccagaacctttggcgcgacgaattcgggggtacattcgggcgcactcgat
ggaagcctcggaaatattatgcgcaacggggcgaatggcgcgacggatccggaggagtgc
ttcgagtacgtctgcgtggcgattcgcgcgctggcgacgggcgtcgccgatcccggctcg
ccccccggctcactcggcgcggtgtgcgcgtccctcccgccggatgaacgcgcgagcgga
ctcgccgccttgctcaagaggtgcgcgcaggcgtcctccccggcggcggcgtcggcagcc
gccgcagccgtcaaagccgcagccgccaacgccgcggcagccgcggccgcagccgccgcg
gcgtccccgcaagcccggcaaacccacggggcgctcatcgcgccgtcgccgtccgtagcc
gccgtcgccgccgccacccccgcggaggttgccggcgcatcagccgcgggtgacggcgcc
ttcatccgccgcgtgtacgccgagctcgtcgcgttgggccgcgacgaggacctcctggag
ctccccgccggtcccctcgagcagcacctcgccgagcgcggtgcctttgagactgcgagg
cagggcggagcgctcacgcgggacgagtcgcggcacctggagctcctcgcgaggctgtac
gccaggcgggagcggcacggactcgcggcgcaggtgtttttcgccctcgccgaacgcgtc
gccggcgcggactgcgccgtgtccctcgacgagcgcgcggcgctgctggacctcgcgctt
cgacacgccaaatcgccgggggcgcacgccgagctcgccggcggagccgccgatgcccag
gtggagacgctcgagggtaagattaaggttctcgagtttcagcgaaggctgcacgcgacg
ttttcggagcgcgcgaggcgtggcggcgcggacgccgatcgcgacgcgcgactcgccgcc
gagctcgagcgcgagctccgcccgctgtcggacatgtacaacgacttcgccaagccgtgc
gacatgcacgatgtgtgcctcgagatgctccacttttcccggtaccgcgacgccgacggc
gccgtggctcgcggcttgtgggacgcgctcttgtcatccgcggcttcgtccgtgcgtgtt
tcatcgccgcaggatgatcgcgccgcgctcttcgccgcgtgcaacgccgccagggcgctc
ggcccgaagctcttccccagcgacgtcgcgttcccggtggcgcacgtggcgctgaagctc
gagctgatggcgggcgggctgtggggcggcgttaacgcggcggtggttgggagcgaagac
gtcggcgccgtcgccgacgcgatgctcgcggcgacgggagattcacccgaggcgatacac
gcggcgtacgacagcctgctcgccacccccgcgtctcgagcgcagcacgggtcaatacgg
ctggtgcaatccgagcagcttcagacgcccgcgctgcggctgcggctgcttcgaagcgcc
ctccgggtgctgcgcaggtgggacgagaagattcgttccgacgccgggctggcgggcggc
ttcggaggcggcggggcggggaacggagcggcgaacgggggtgggttcggcgcttttggc
gcgggtcaaggcgcgcacgttcgcgccgcgctcggagacgtgtgcgtagggtacgccggg
gaggctcgtcggctgctgcaggtgccgacgagcgcgcagggcgcggcggaggcgctcgcc
gaggagtttgacgcgctcgggaagaggctcatcgggtga
DBGET
integrated database retrieval system
