Micromonas commoda: MICPUN_59848
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Entry
MICPUN_59848 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14801
pre-rRNA-processing protein TSR4
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_59848
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
MICPUN_59848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
CpXC
Motif
Other DBs
NCBI-GeneID:
8245129
NCBI-ProteinID:
XP_002503486
JGI:
MicpuN3_59848
UniProt:
C1E9V0
LinkDB
All DBs
Position
7:282928..284187
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AA seq
419 aa
AA seq
DB search
MSAPADDDGDAVHGVDRLPGDAENAARAMDEIVADSDEDGGDTDEDVPDQPEDDYESDGD
DQEWALGFCERAPAETLQRQFFPSKVGGRPAWLDPVDVPTAAQLKCLYTREPLDFLLQVY
ASVDDEPTAFHRAVFLFVSPHGGDLHRPGAVRAFRSQLPRINPFYPDEPCEQGDPLQELT
DAQHAAYELRHDRWSDDALRGAIAHRPRMFPERELVVEPEEFLEDDEVTASIAGAENAAR
VAAAMTPAEEGSDEWKEQVRRARESLPEALRGVGDDVSEAEVRSLERAQDKNQVRLSQFH
LRLRRTDPTQVLRYCFDEGAKPLWPSVSDAPEQNERTVPPCPRCGSPRRFEFQVLPTIVN
HLDVDSELNSAVDFGSIAVYTCARSCAPPTHDGTRGVAADGKSEAYAEECVLVHPPLNA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgccggcggacgacgacggcgacgcggtgcacggcgtcgaccgcctgcccggg
gatgccgagaacgccgcccgcgcgatggatgagattgtcgccgactcggacgaggacggg
ggcgacacggacgaggacgtcccggaccagcccgaggacgactacgaatccgacggcgac
gatcaggagtgggcgctggggttctgcgagcgcgcccccgcggagacgctccagcggcag
ttctttccgtccaaggtgggcggccgacccgcgtggctcgacccggtggacgtgcccacc
gccgcgcagctcaagtgcctctacacccgcgagccgctcgacttcctcctgcaggtgtac
gcctcggtggacgacgagcccaccgcgttccaccgcgccgtcttcctcttcgtctcgccg
cacggcggggaccttcacaggccgggcgccgttcgagcgtttcgatcgcagctacccaga
atcaaccccttctaccccgacgagccgtgcgagcagggggacccgcttcaggagctcacg
gacgcgcaacacgcggcgtacgaattaagacacgacaggtggtccgacgatgccctccgc
ggcgccatcgcgcacaggccgaggatgtttccggagcgcgagctggtcgtggagcccgag
gagttcctggaagacgacgaggtcaccgcgagcatcgccggcgccgagaacgcggcgcgc
gtggcggcggcgatgaccccggcggaggagggcagcgacgagtggaaggaacaggtgaga
cgcgcgagggagtcgctgccggaggcgctccggggcgtgggcgacgacgtgagcgaggcg
gaggtgcgatcgctcgagcgagctcaggataagaaccaggtgcgtttgtcccagtttcac
ctgaggctgaggcgcacggatccgacgcaggtgctgcggtactgcttcgacgagggcgcc
aagcccttgtggccgagcgtgtcggacgcgccggaacaaaacgagcggacggtgccgccg
tgcccgaggtgcgggtcgccgcgtaggttcgagtttcaggttttacccacgattgtcaac
cacctggacgtggacagcgagctcaactcggcggtggactttgggtcgatcgcggtgtac
acgtgcgccaggtcgtgcgccccgccgacgcacgacggcacgcggggcgtcgccgcggac
ggcaagagcgaggcgtacgcggaggagtgcgtgctggtgcacccgccgttaaacgcgtga
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