Micromonas commoda: MICPUN_59886
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Entry
MICPUN_59886 CDS
T02695
Name
(RefSeq) predicted protein
KO
K10839
UV excision repair protein RAD23
Organism
mis
Micromonas commoda
Pathway
mis03420
Nucleotide excision repair
mis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MICPUN_59886
09124 Replication and repair
03420 Nucleotide excision repair
MICPUN_59886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mis03051
]
MICPUN_59886
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_59886
Proteasome [BR:
mis03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
MICPUN_59886
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
MICPUN_59886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
UBA_7
ubiquitin
UBA_3
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
8245147
NCBI-ProteinID:
XP_002503857
JGI:
MicpuN3_59886
UniProt:
C1E9Y8
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Position
7:complement(join(369301..370402,370749..370771))
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AA seq
374 aa
AA seq
DB search
MKVAFKTLTNQKFEEDFADDASIGDVRAKLSETQKIPAPEMVLIHKGKVLTDDATLAAAG
VTEASFIVMMHQKPKAPKPAPPPPVPKPAAAAPAPAPATTPEAPAAATPETPAATPSTEP
APAGTPTDSSLVTGAALQETINNMMSMGFERDACVRALRAAFNNPDRAVEYLLTGIPENL
MPPAAPAAPAAAAPAAAAPAAAAAAAATAPGGPGPNTQPLNLFPEGGVPGGGGGGGGEGS
GILDFLRENPQFQAIRAMVQGNPQILQPMLAELQRQNPQLYQLIAGNQEEFLRLLNEPAP
EGALENLAAGLGDGGGFGGDDGEGQIEISEDEKAAIDRLAALGFEFERAAEAFFACGKNE
ELAANFLFDNAGQD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgccttcaagacactcaccaaccagaagttcgaggaggacttcgcggacgac
gcgtccatcggggacgtccgcgccaagctctccgagacgcagaagatcccggctcccgag
atggtgctgatccacaagggcaaggtgctcaccgacgacgcgacgctcgccgccgctggg
gtcaccgaggcgagcttcatcgtgatgatgcaccagaagcccaaggcgcccaagcccgcg
ccgcctcccccggtgcccaagcccgccgccgccgcgccggctcccgcgccggcgaccacc
ccggaggcaccagccgcggccacccccgagacccccgccgcgactccctcgacggagccc
gcgcccgccggcaccccgacagacagctcgctcgtcaccggcgccgcgctgcaggagacc
atcaacaacatgatgtccatgggtttcgagcgcgacgcgtgcgtcagggcgcttcgagcc
gcgttcaacaacccggaccgcgcggtggagtacctcctcaccggcatccccgagaacctc
atgcctcccgcggcgcccgccgctcccgccgccgccgctcccgccgccgccgctcccgcc
gccgccgccgccgcggccgcgacggcgcccggcggcccgggccccaacacccagcccctg
aacctcttccccgagggcggcgtccccggcggcggcggcggcggcgggggagaggggagc
ggcatcctcgactttcttcgcgagaatccccagtttcaggctattcgcgccatggtccag
ggcaacccgcagatcctccagcccatgctcgcggagttgcagaggcagaacccgcagctg
taccagctcatcgcgggcaaccaggaggagtttctcaggctgctcaacgagccggcgccg
gagggggcgctggagaacctggcggctgggctgggcgacggcggcgggttcggcggcgac
gacggggagggacagattgaaatctccgaggatgaaaaggcggccatcgaccgactcgcc
gcgctcgggttcgagtttgagcgggccgcggaggcgttcttcgcgtgcgggaaaaacgag
gagctcgccgcgaacttcctcttcgacaacgccggtcaggattga
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