Micromonas commoda: MICPUN_59948
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Entry
MICPUN_59948 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14827
pre-rRNA-processing protein IPI1
Organism
mis
Micromonas commoda
Pathway
mis03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
MICPUN_59948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_59948
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
MICPUN_59948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
TOR1L1_N
PDS5
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
8244830
NCBI-ProteinID:
XP_002503886
JGI:
MicpuN3_59948
UniProt:
C1EA50
LinkDB
All DBs
Position
7:complement(480305..483757)
Genome browser
AA seq
1150 aa
AA seq
DB search
MGKKTKSVNNKQSTGIDFIRAKKKVGRKIRKQANETNTEVRAKRINLSVQSLGTEGKGDQ
VTGRGLSMPELLNQCQHYSARVRKDALDGIKELLETHPTSLVPCAATCVEKVAERLVDQE
QIVRAAARGALRSGVLPALGPHGIAPFARRLVLHVGAALTHVAPAVRRDAPAVLEALLDA
SPRLVGAHAPAATLRHLAELLRRGDDAASSSLVSGASDGSVQIVAGGLSAKFGDMTAARV
GPTQPPARLGLLQSCRRFLEVLVGATTAALDFDTGEGYDKVTAKGAIIAGGGHRWRWGDD
DGDDLDGLDGLDGGPDGKENSRTRRAGRAEGAGVALHAARCARAPVSAARAVEEFFGSSS
GGRRSGRVANGPGDGREGVAVAAAELAALLFAVWDEATPTLKDAGGPNLTRVRVMAEAMS
CMHLCLWLVDDDGDGGDGGGGGDGGGGGSGAAMAAALPYLVARVLPMFPASAPPVGDVSV
RGALVRLNAATARILSAASEGAAKVAAAAAEDAARAHRALVTYSGEMMDLPSAPSAPSAP
AHVAPTWRWNHAASVVDVDAADRATSAVADYLSAALRGCALDAGPCGEAEPTREGDYGDL
LRMARSVLLRPALYGGGGELGGGVDSDGGVDERGTDVGASDGDEETRDGDDETMWDGYPT
GGTDAAGSRAALAHSVGAVWSEAVVSGPPEVRGACVGLLAAVLPRVAATTRGDGPGVCAS
VGADVAAGWLRPYARLLWELKHGDPGTTSRALRTLHAVAARCSGEGGDSGDESPLAAALA
AVETELAPFFARVPPPASTDQTAPRRRGKPGPFSKLPAACQHVAIALLGQLPRLSPTTLR
AAAHAALNEDADPNIAVRAAEAMTCNMRAAPLALSVSFLSALLTGAGSWRGARRAAPAAA
RALVGVGDSASPWAGASLAWPAVNLAVVRAERAGDVEGARRARFGVLVLAALASEARRAQ
REAKEAGSKEASAPVEGAEERVSALDVDAEAAVVAWACDGFATAPGGSDDGDDDLRGASA
RLARSDPGWARSALRRLRSTRVQPAFNPRSTSATNEGGEAADTAGEEGDGGDASRCEAVV
YAASALAALAGDVLPEETVRELAGEFIATMRTCEEAADACVRDELPGSARAARAVRAAKL
ALDGVVGGSA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaagacgaagagcgtgaacaacaagcagagcaccggcatcgacttcatccgc
gccaagaagaaggttgggcgcaagatccgcaagcaggcgaacgagacaaacaccgaggtg
agggcgaagcgcatcaacctctcggtccagtcgctcggcacggagggcaagggagatcag
gtcacggggcgcgggctgtccatgcccgagctcctgaaccagtgccagcactacagcgcg
agggtgcggaaagacgcgctcgacggcatcaaagagctcctcgagacccatcccacgtcc
ctcgtgccgtgcgcggcgacgtgcgtcgagaaggtcgccgagcgcctcgtcgaccaggaa
cagatcgtgcgcgccgccgcgaggggcgcgctcaggtccggcgtcctccccgccctcgga
cctcacggcatcgcgccattcgccagaagattggtcctccacgtcggcgccgcgcttacg
cacgtcgcgccagctgtgcgccgggacgcgcccgccgtgctcgaggccctcctcgacgcg
tcgccgcggctcgtcggcgcgcacgctcccgccgcgacgctccgacacctcgcggagctc
ctcaggcgcggtgacgacgcggcgtcctccagcctcgtgtcaggcgcgagcgacggctcg
gtacaaatcgtcgccggcgggttgtcagccaagtttggggacatgaccgccgcgcgggtg
ggtcccacgcagccccccgcgaggctcgggctcctgcagtcgtgtcgcaggtttctggag
gtgctcgtcggcgccacgaccgccgcgctggactttgacacgggcgaaggttacgacaag
gttacggcgaagggggcgatcatcgcggggggcggtcaccgctggcggtggggcgacgac
gacggcgacgatttggacggcttggacggcttggacggcggtccggacgggaaagaaaac
tcgaggacgaggcgtgcggggcgcgcggagggcgcgggggtggcgcttcacgcggcgagg
tgcgcgcgcgcgccggtatcggcggctcgcgccgtcgaggagttcttcggctcgagctcc
gggggtcgacggagtgggcgagtggcgaacggtccgggggatggtcgcgagggcgtcgcc
gtcgccgccgccgagctcgccgccctcctcttcgccgtgtgggacgaggccacgcccacg
ctcaaggacgcggggggcccgaacctgacccgcgtcagggtcatggcggaggcgatgtcg
tgcatgcatctgtgcctctggctcgtcgacgacgacggcgacggcggggacgggggcggg
ggcggcgacgggggcgggggcgggtccggcgccgcgatggccgcggcgctcccgtatctc
gtcgcccgcgtcctcccgatgtttcccgcgtctgcgccgcccgtcggagacgtctccgtt
cgcggggcgctcgtgcggctcaacgccgccaccgcgaggatcctctccgccgcctccgag
ggcgccgcgaaggtggccgccgccgccgcggaggacgccgcgcgcgcgcaccgcgcgttg
gtcacctactccggcgagatgatggaccttccctcggcaccctcggcaccctcggcaccc
gcccacgtggcgcccacgtggcggtggaaccacgccgcgagcgtcgtcgacgtcgacgcc
gcggatcgcgcgacgtcggcggtggcggactacctctccgcggcgcttcgcggctgcgcg
ttggacgccgggccgtgcggcgaggccgagccgacgcgggagggtgactacggcgacttg
ctccggatggcgcgatcggtgttgttgcgtccggcgctgtacggcggcgggggcgagttg
gggggcggggtggactctgacggcggtgtggacgagcggggaaccgacgtcggcgccagc
gacggcgacgaggagacccgggacggggacgacgaaacgatgtgggacgggtaccccacg
ggtgggaccgacgcggccgggtccagggcggcgctcgcacactccgtgggcgcggtgtgg
agcgaggcggtggtgagcggtccccccgaggtacgcggcgcgtgcgtcgggttgctcgcc
gcggtgctgccgagagtcgcggcgaccacccgcggggatggaccgggcgtttgcgcctcc
gtcggcgcggacgtcgccgcgggttggctgaggccctacgccaggctcctgtgggagctg
aagcacggcgacccggggacgacgtcgcgcgcgctccggacgctgcacgcggtcgccgcg
cggtgctcgggggagggcggggactcgggagacgagagtccgctggcggcggcgctggcg
gcggtcgagaccgaactcgcgcccttcttcgcgcgggttccgccgccggcatcgacggac
cagacggcaccgaggcgacggggcaagcccggccccttctccaagctcccggccgcgtgc
cagcacgtcgcgatcgcgctcctcggccagctgccgcggctgtcgccgaccacgttgagg
gcggcggcgcacgcggcgttgaacgaggacgcggacccaaacatcgccgtgcgcgccgcc
gaggcgatgacgtgcaacatgcgggccgcgccgctcgcgctctcggtgtccttcctctcc
gcgctgctcacgggggcggggagttggcgcggcgcgaggcgcgcggcgcccgcggcggcg
agggcgctggtcggggtgggcgactcggcttcgccgtgggctggcgcgtcgctcgcgtgg
ccggcggtgaacctcgcggtcgttcgcgcggagcgtgcgggggacgtggagggcgcgagg
cgcgcgcggttcggggtgctcgtgctcgcggcgctcgcctcggaggcgcggcgcgcgcag
agggaggcgaaggaggcggggtcgaaggaggcgagcgcgcccgtcgagggcgccgaggaa
cgggtgagcgcgctggacgtcgacgccgaagccgcggtcgtcgcgtgggcgtgcgacggc
ttcgccacggccccgggaggatcggacgacggcgacgacgacctgcgcggcgcgagcgcg
aggctcgcgaggtccgatcccgggtgggcgcgatccgcgctccgccgcctgcgctcgacc
cgcgttcaacccgcgttcaacccgcgttcaacctccgcgacgaacgagggaggagaggcg
gcggacacggcgggggaggaaggggacggaggcgacgcgagcaggtgcgaagccgtcgtg
tacgcggcgagcgcgctcgcggcgctcgcgggtgacgtcctccccgaggaaaccgttcgg
gagttggcgggcgaatttatcgcgacgatgaggacgtgcgaggaggcggcggacgcgtgc
gtgagggacgaacttcccgggtcggcgcgggcggcgagggccgttcgcgccgctaagctc
gcgctggacggtgtcgtggggggttcggcgtag
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