Micromonas commoda: MICPUN_60143
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Entry
MICPUN_60143 CDS
T02695
Name
(RefSeq) predicted protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mis
Micromonas commoda
Pathway
mis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MICPUN_60143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_60143
Enzymes [BR:
mis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MICPUN_60143
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MICPUN_60143
DNA repair and recombination proteins [BR:
mis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MICPUN_60143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-GeneID:
8244928
NCBI-ProteinID:
XP_002503637
JGI:
MicpuN3_60143
UniProt:
C1EAP1
LinkDB
All DBs
Position
7:join(842441..843248,843281..843351)
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AA seq
292 aa
AA seq
DB search
MPELPEVESARCLVEAHCIGAKVTKVEFNEDGSFDEKIFKDVERKAFVSALLNKTLTAAH
RRGKHMWWDMSGGADSPLFHFGMTGAFSIRGKGAMKYKAFVVDTSNWPPRFAKLVVTFDN
GIALAYTDPRRFGRIRLVRGDVTASPPISELGFDPLLAMPDEAAFASRFAKRGGPIKSVL
LDQTIAAGVGNWIADEVLYHSRLHPEQPAKSLTPAQLRDLRDAMEDVIKTACDAGADAEM
FPDDWLFHHRWGKVAGEVGGEPIQFITVGEENEREACGWREGGAQETRGRER
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttcccgaggtggagagcgcgaggtgcctggtcgaggcgcactgcatcggc
gccaaggtgaccaaggtggagttcaacgaggacggaagttttgacgagaagatcttcaag
gatgtcgagcggaaggctttcgtctccgctctcttaaacaagaccctgacggcggcgcat
cgtcggggtaaacatatgtggtgggacatgagcggaggcgcggactcgcctctttttcat
ttcggcatgaccggggcattttccatccgggggaagggagcgatgaagtacaaggctttc
gtcgttgatacctcgaactggccgccgcgctttgccaagctcgtagtcacctttgacaac
ggcatcgcgctggcgtacacggacccgcgaaggttcgggcgcatcaggctggtacgcgga
gacgtcacggcgtcaccgcccatatccgagctcggcttcgatcccctgctggcgatgccc
gacgaggccgcgtttgcgtcgcgcttcgccaaacgcggcggtccaatcaagtcggtcctc
ctggaccagaccatcgccgcgggcgtgggcaactggatcgcggacgaggtcctctaccac
tcgaggctgcatccggagcagcccgcgaagtcgttgacgcccgcgcagctgagggatctg
agggacgcgatggaggacgtgatcaaaaccgcgtgcgacgcgggcgcggatgcggagatg
ttcccggatgactggctgtttcaccacaggtggggcaaggtcgcgggcgaggttgggggt
gaaccgattcagttcataaccgtcggggaagaaaacgagcgagaagcatgcggctggcgt
gaaggcggagcccaagaaacgaggggccgagaacgatga
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