Micromonas commoda: MICPUN_60321
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Entry
MICPUN_60321 CDS
T02695
Name
(RefSeq) ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mis03016
]
MICPUN_60321
Enzymes [BR:
mis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MICPUN_60321
Transfer RNA biogenesis [BR:
mis03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MICPUN_60321
BRITE hierarchy
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
8245362
NCBI-ProteinID:
XP_002503718
JGI:
MicpuN3_60321
UniProt:
C1EB65
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All DBs
Position
7:1197205..1199760
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AA seq
851 aa
AA seq
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MKTMPGSPPWAAARAMSSAPWTARSPFAASAALSSRRISSVDGRCPELRPARRASRTRRP
SQHRRLATAPRDYFGRDDTRVGSVVGYCARDGPPVLAVVTAPALRRRIPVLTHDGAVDAV
ELKSVEFAATRGMGSGTNAGTEPPTNDAATSASPPGSPSDASKRLAAVHAYATRLLHERP
ALAERAWRRALDAAVPNPRDGASRAPVDCSTLAAFVFDRDEEPALCESSNAVATEANVDV
CLVRCYAAHVLASDTPGRFRRHGKGRFAARTELEVQSFAADAASQAAADSERDAAWAKVG
EAINAPPGSKPPRTTFLDGTVTQLRVEALEAYALGDGNRTSAQRASAIDFLKRLGAKIGE
RSAMDTLVALGRWRGYEELSFARHDVPTAFLSDALEHAARLAAEAPPDADGEIRKDLTRL
RCYAIDGEGTVEVDDAVSAEALPGGKIRVWVHVADATRWVGLGTPLEAEAESRGASGYHP
RGVLPMFPLPVAAGLMSLTPGEPKCAVSVTAVIDESGATEEYWVGTSTIRVTRAATEGEV
IKMLAEEPGRHESLELLVEAARRRRELRLKRGAVEVRTPEATARVIDVGEGEGFVERDDI
PGGVRTGGNRCEQSATAVRRAEAAALDVRLTRGDHNDVKDLVGEAMILCGELIARFGSEN
GVPLPYRGQLEPRDISQKTWDETPPGLCREVLKRHSMRGANQGPTPRRHAGLGIDAYVQF
SSPIRRYTDLLAHYQVKAFLRGETPPLNADALSTRLDANGDRTRTLRAACRESDQFWTIE
WYRRGGVDKDHVGTVVKWVKKDANAALVCFDETGVEWKCVVRKRTRLGDAVTMRVREADP
YSGRLMFAQAR
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgatgcccggctcgccgccgtgggcggcggctcgggcgatgtcgagcgcgccg
tggaccgcgcgctcgccgttcgccgcgtccgccgcgctctcatcgcgccgcatctcatct
gtggacgggcgatgccccgagctccgccccgcccgtcgcgcgagccggacccggcgcccc
tcccaacaccgccgactcgccaccgccccgcgcgattactttggccgcgacgacacgcgg
gtcgggtccgtggtcgggtactgcgcgcgcgacggcccgcccgtgctcgccgtcgtcacc
gcgccggcgctcaggcgcaggatccccgtgctcacgcacgacggcgccgtcgacgcggtg
gagctgaaatccgtcgagttcgccgccacacgggggatgggttcggggacgaatgccgga
acggaacccccgacgaatgacgccgcgacgagcgcgtcgccgcccggaagcccttcagac
gcctccaaacgcctcgccgcggtgcacgcctacgcgacgcgcctcctacacgagcgcccc
gccctcgcggagcgcgcgtggcgccgcgcgctggacgccgccgtcccaaacccccgcgac
ggcgccagccgtgcgcccgtcgactgctccacgctcgcggcgttcgtcttcgatcgcgac
gaggaacccgcgctgtgcgaatcgtctaacgccgtggcgaccgaggcgaacgtggacgtg
tgcctcgtgcgatgctacgccgcgcacgtgctggcgagcgacacgccgggaaggttcagg
cgccacggcaaagggcgcttcgcggcgaggacggaattggaggtgcaatccttcgccgcc
gacgccgcttcgcaggcggcggcggattccgagcgcgacgcggcgtgggctaaggtcggt
gaggcgataaacgccccgccgggatccaaaccgccgcgcaccacctttctcgacggcacc
gtcacgcagctgcgcgtggaggcgctcgaggcgtacgcgctcggcgacggcaacaggacg
tcggcgcaacgagcgtcggcgattgattttctgaagcgtctcggcgcgaagatcggcgaa
cggtcggcgatggacacgctcgtcgcgctcgggcgttggcgcgggtacgaggagctgtcg
ttcgcgcgacacgacgtgccgacggcgttcctgagcgacgcgctggagcacgcggcgcgg
ctggcggcggaggcgccgcccgacgccgacggcgaaattcgaaaggacctcacgaggctg
cggtgttacgccatcgacggcgaggggacggtcgaggttgacgacgcggtgtccgcggag
gccttaccggggggtaagatacgcgtgtgggtccacgtggcggacgcgacgcggtgggtg
ggtctcggaacgccgctcgaggcggaggctgagtcgaggggtgcgagcgggtaccacccc
cggggtgtcctgcccatgttcccgctccccgtggcggcgggtttgatgtccctcacgccg
ggcgagcccaagtgcgcggtttcggtgacggccgtgatcgacgagtccggcgcgacggag
gagtactgggtgggaaccagcacgattcgcgtcactcgcgcggcgacggagggggaggtt
attaagatgttggccgaagagcccggccggcacgaaagcctggagctgctcgtcgaggcg
gcgcgtcggcgacgggagctccgcctgaagcgcggcgcggtggaagtgcgaacgccggaa
gccaccgcgcgggtgatcgacgtcggggagggcgaggggttcgtggaacgggacgacata
cccggcggagtccgaaccggggggaaccggtgcgagcaatccgcgaccgcggttcggagg
gcggaggctgccgccctggacgtccgactgacccgcggcgaccacaacgacgttaaggac
ctcgtcggggaggcgatgatcctgtgcggcgagctcatcgcccggttcgggtccgagaac
ggcgtgccgctgccctaccgcgggcagctcgagccgagggacatatcgcaaaagacgtgg
gacgagaccccgccgggtttgtgccgggaggtgctcaagcgacacagcatgcgcggcgcg
aaccaggggccgactccccgcaggcacgcgggtctcgggatcgacgcgtacgtccagttc
tcgtcgccgattcgtcggtacaccgacctgctggcgcactaccaggtgaaggcttttctg
cgaggcgagacgcctccgttgaacgccgacgcgttgtcgacgcgtctcgacgccaacggc
gatcggacccggacgctgcgcgccgcgtgcagggagtccgatcagttctggacgatcgag
tggtatcggcgcggcggggtggacaaggaccacgtcgggaccgtggtgaagtgggtcaag
aaagatgccaacgcggcgctggtttgcttcgacgagacgggcgtcgagtggaagtgcgtg
gtgcgcaagcggacgcgactgggcgacgcggtgacgatgcgcgtgagggaggctgatccg
tactcgggaaggctcatgttcgcgcaggcgaggtga
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