Micromonas commoda: MICPUN_60648
Help
Entry
MICPUN_60648 CDS
T02695
Name
(RefSeq) predicted protein
KO
K13175
THO complex subunit 6
Organism
mis
Micromonas commoda
Pathway
mis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MICPUN_60648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_60648
03041 Spliceosome [BR:
mis03041
]
MICPUN_60648
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
MICPUN_60648
Spliceosome [BR:
mis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MICPUN_60648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WDR55
EIF3I
NBCH_WD40
Beta-prop_HPS5
Beta-prop_EIPR1
CRT10
Motif
Other DBs
NCBI-GeneID:
8245529
NCBI-ProteinID:
XP_002508183
JGI:
MicpuN3_60648
UniProt:
C1FFW1
LinkDB
All DBs
Position
8:complement(488713..489858)
Genome browser
AA seq
381 aa
AA seq
DB search
MSVALFDCTSAYDTTTAEYSAVVREEAARATRTVYASVFFGENYLACGSSSGSLSVFNLD
DVLREQRGSGGGTSSPDPSPRPSLVVPDAHRGAVYSVIAFTLQGSEMLCSAGEDGRSVLW
RASDLIAAANAKATRSERTVAVTPAGEFKNPQESKARGALGPVPETTALAVDPTRGTLLS
AAGDGVCYGWDLGEGRDAPAMRLRGHNDLLHCVAARVGANQAVTGSEDGTARIHDLRSET
CSHVIDVWRAKEGKSGGHGSGAWVGCVALDKAENWAAMGCGGGCITMWSFAAGACASRVP
TAAPPQALRLTGQHVMAAGAEPAVYRWNLAGEQISRQPCTPKSVFTLDLQPQRSLTAVGG
TGGSVDIFSELGTRVTTLRCL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgctttattcgattgcacctccgcgtacgacaccaccaccgcggagtattcc
gcggttgtcagggaggaggcagccagggcaacgaggactgtttatgcctccgtgtttttc
ggagaaaactacctggcgtgcggaagcagcagtggctctctctccgtgttcaacttggat
gacgtcctgcgcgagcagaggggcagcggagggggcacatcgagcccagacccatcgccc
cgcccctcgctcgtagtccccgacgcgcatcgcggagctgtgtactcggtgattgcgttc
actctgcaaggatcggagatgctctgctccgcgggggaggacgggcggagcgtgctgtgg
cgagcctcagacctcatcgcggccgcgaacgcgaaagcgactcggtcggagaggacagtg
gcggtgaccccagcgggagagttcaagaacccccaggagagcaaggcgaggggcgcgtta
ggacccgtcccggagacgacggcgctcgcggtcgatcccacccgagggacgctcctgtcc
gccgcgggagatggcgtgtgctacggttgggacctcggcgaaggtcgcgacgcgcccgcg
atgcgtctgcgggggcacaacgacctgctgcactgcgtcgcggcgcgtgtaggcgcgaac
caggcggtgaccgggtccgaggatgggacggcgaggatccacgacctgaggtccgagacg
tgctcccacgtcatcgacgtgtggcgcgccaaggaggggaaaagcggagggcacgggagc
ggcgcgtgggtcgggtgcgtcgcgctggacaaggctgaaaactgggcggcgatgggatgc
ggcggcggttgcatcaccatgtggtcgtttgcggcgggggcttgcgcttcgagggtgcca
accgctgcgccgccgcaggcgctgagactgacgggccagcacgtcatggcggcaggggcg
gaacccgcggtgtacaggtggaacctcgcgggggagcagatatcgaggcagccgtgcact
ccgaagagcgtgttcacgctggacctgcagcctcaaaggagtttgaccgccgtgggaggg
acgggcggaagcgtagacatattcagcgagttgggcaccagggtcaccaccctgaggtgc
ctttga
DBGET
integrated database retrieval system
