Micromonas commoda: MICPUN_61120
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Entry
MICPUN_61120 CDS
T02695
Symbol
MSH4
Name
(RefSeq) MutS 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_61120 (MSH4)
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Meiosis-specific proteins
Others
MICPUN_61120 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_23
Motif
Other DBs
NCBI-GeneID:
8246046
NCBI-ProteinID:
XP_002504488
JGI:
MicpuN3_61120
UniProt:
C1EBM2
LinkDB
All DBs
Position
9:complement(join(218041..220652,220762..221077))
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AA seq
975 aa
AA seq
DB search
MAAPTNEGAGPPSPPACTVIAAVLQNRAREVGVALFDKRGGPSLDLEQHVEVGESHATTL
CELQRARPGVILTLAGDRGGALGDALARFARAHDCALVELPRKQFDDIVGADLVARCARR
GSRLAPNPKDAYLAFAAAAAVLQFVEHGGVERATNDAENSLEPLVGRRRHRWEPFPLHEA
ARASPGTVVVTCCRSEHFIALDPAAARVLEIARPLGPTGEPVAEPKRSNPNRSSKPINPR
TDPVGAANARDSRARPHARRSLLGLLDTCATRGGSRLMKASLLQPLRDHATINARLDAVE
ELLRSGGLAHECRRRLAATTGGKDVEAVTSMFAEPRRRPSAPHSAPHSAPEGGPPSSEVR
PIDANPGRVAARIRTLLDTRRALEEVPKLGDALKNTNAGLLREIGEVLRDPFFAGFLHRI
DGVFEPDVVDGRSSFSAKTRQVFAVKSGVDAFLDIARRNFCEATEAAHELIRALRERTGL
ESPRLDYTATGMFQIKVTRSDFGRYSVNASHFDASLPTLHAIDTLGDDATRPIRRDDDDA
AGVRNDRVVRCTCDGLDVINRRCVDSADEAMRRSAAAVESVAASVRANVAALGALSSALS
LLDVLCAFAVRVMTSKGPYVRPVFGDRESPLAIEAGRHPVLEELPGVDFVANSAYLSPAF
NLSVVTGPNGGGKSTYLRQVAVLVVLAHSGCFVPATFFSAPPVDAIFTRVGTSDSMETDA
STFAVECRECARILSRATCHSLVLVDELGRSTDSEEGERFAWATAEALLERGCKTLFATH
ARRLGKLAQLYPNVRTSTMAVDLVGGRRRVAVDDPNRNGNGDDQNRRMECRYRLVDGACE
APHYGLRAAEALGGFPAEMMRDAWAIARRVETAAAAAAAAAAAAASDGGTAGGGFLPGHS
RRDAAGDDATRIAVERAARTAKVAERARRLFEIEAGGGTEGAEGRGGREKREAALASLRA
TAADVAGFGGGGACA
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccgacgaacgaaggcgcggggccgccttcgccacccgcgtgcaccgtcatc
gcggcggtcctccagaaccgcgcgagggaggttggcgtcgcgctgttcgacaagcgcggc
ggcccgtcgctggacctggagcagcacgtcgaggttggagagagccacgccacgacgctg
tgcgagctgcagcgcgcgcgaccgggcgtgatcctgacgctcgcgggcgacaggggcggc
gcgctcggcgacgccctcgcgagattcgcgcgcgcgcacgattgcgcgctcgtcgagctt
ccgcggaagcagttcgacgacatcgtgggcgcggacctcgtcgcgcggtgcgcgcgccgc
ggctccaggctggcgcccaaccccaaggacgcctacctcgccttcgccgccgccgccgcg
gtgctgcagttcgtcgaacacggaggcgtcgagcgcgcgacgaacgacgcggaaaactcg
ttggaacccctagtaggacgtcgccgccaccgctgggaacccttcccgctgcacgaagcc
gcgcgcgcgtccccgggaaccgtcgtggtgacgtgctgcaggagcgagcacttcatcgcg
ctggacccggcagccgcgcgagtgctcgagatcgcgcgacctctcggccccaccggcgaa
cccgtcgccgaaccgaaacgttcaaacccgaaccgctcttctaaaccgattaacccccgg
acggacccggtcggcgccgcgaacgcgcgcgactctcgagcacgcccccacgcacgccgg
tcgctgctcggtttgctcgacacgtgcgccacgcgcggtgggtcgaggctgatgaaggcg
tcgctccttcagcccctgagggaccacgccacgataaacgcgaggctggacgcggtggag
gagctgcttcggtccggcgggctcgcgcacgagtgccggcggaggttggcagccaccacg
ggcgggaaagacgtcgaggcggtgacgtccatgttcgccgagccgcgacggcgcccgtcg
gcaccccactcggcaccccactcggcacccgagggtggccccccctcttcggaggtccgt
ccgatcgacgccaaccccggaagggtcgcggcgaggatccggacgcttctggacactcga
cgcgcgctcgaggaggtgccaaaactcggcgacgcgctgaaaaacaccaacgcggggttg
ctgagggagattggcgaggttcttcgcgaccccttcttcgccggtttcctgcatcgcatc
gacggggtgttcgagccggacgtggtggacggcagatccagtttctccgccaagacgagg
caggtgttcgcggtcaagtcaggcgtggatgcgtttctggacatcgccagaaggaacttt
tgcgaagccaccgaggctgcgcacgagctcatacgcgcccttcgcgagcgcaccggcctg
gaatcccccaggctcgattacaccgcgaccgggatgttccaaatcaaggtgacccggtcc
gatttcggcaggtactccgtgaacgcgtcccacttcgacgcgtctctcccgacgctgcac
gcgatcgacaccctcggcgacgacgcgacccgaccgataagaagggacgacgacgacgcc
gccggtgttcgaaacgaccgcgtcgtgcggtgcacgtgcgacggcctcgacgtcatcaac
cgacggtgcgtcgactcagccgacgaggcgatgcgaaggagcgccgccgcggttgaatcc
gtcgccgcgtccgtccgcgccaacgtcgccgcgttgggcgctctctcgtccgcgctctcg
ctgctcgacgtcctgtgcgcgttcgccgtccgggtcatgaccagcaaaggaccgtacgtt
cgaccggtgttcggcgatcgcgagagcccgctggcgatcgaagccggacggcacccggtg
ctggaggagctcccgggcgtggacttcgtcgccaactccgcctacctctccccggcgttc
aacctctccgtcgtgaccggcccgaacggtgggggtaagagcacgtacctgcggcaggtc
gcggtactcgtcgtcctggcgcactcgggatgcttcgtcccggctacgtttttcagcgcg
ccgcccgtcgacgcgatcttcacccgcgtcggcacgagcgactcgatggagacggacgcg
agcacgttcgcggtggagtgccgcgagtgcgccaggatcctgtcccgcgccacctgccac
tccttggtcctcgtcgacgagctcggtcgatccaccgacagcgaagagggcgagaggttc
gcgtgggcgacggcggaggctctgctggagcgcgggtgcaagaccctgttcgccacgcac
gctcggcgactcggtaaactcgcgcagctctacccgaacgtcaggacgtcgacgatggcg
gtggacctcgtgggcgggcggcggcgcgtggccgtggatgacccgaaccggaatggaaac
ggggatgaccaaaaccgacgcatggagtgcaggtacaggctcgtggacggcgcgtgcgag
gctccgcactacggcctccgagccgcggaggcgctcggaggttttcccgcggagatgatg
cgcgacgcgtgggcgatcgcgcgtcgggtagagaccgcggcggcggcggcggcagcggcg
gcggcggcggcggcgagcgatggcggcacagccggcggaggatttttgccgggacacagc
cggcgagacgcagccggcgacgacgcgacgagaatcgccgtcgaacgcgcggcgcggacg
gcgaaggtggcggagcgggcgaggcggctcttcgagattgaagccggcgggggtaccgag
ggtgccgagggtcgcggcgggcgcgagaagagggaggcggcgctcgcgtcgcttcgagcg
acggctgcggatgtggcgggatttggggggggaggcgcatgcgcgtga
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