Micromonas commoda: MICPUN_61177
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Entry
MICPUN_61177 CDS
T02695
Name
(RefSeq) histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
mis
Micromonas commoda
Pathway
mis03082
ATP-dependent chromatin remodeling
mis03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MICPUN_61177
03083 Polycomb repressive complex
MICPUN_61177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_61177
Enzymes [BR:
mis01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
MICPUN_61177
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
MICPUN_61177
HDAC complexes
Sin3A-HDAC complex
MICPUN_61177
BRAF-HDAC complex
MICPUN_61177
REST complex
MICPUN_61177
SHIP complex
MICPUN_61177
MiDAC complex
MICPUN_61177
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
MICPUN_61177
Heterochromatin formation proteins
Other heterochromatin formation proteins
MICPUN_61177
Chromatin remodeling factors
NuRD complex
MICPUN_61177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
8246073
NCBI-ProteinID:
XP_002504208
JGI:
MicpuN3_61177
UniProt:
C1EBS9
LinkDB
All DBs
Position
9:312279..313571
Genome browser
AA seq
430 aa
AA seq
DB search
MAPSKDRICYFYDSDVGTSYYGNNHPMKPHRLAMTHHLVLSYDLHRRMEVYRPRRSYPVE
MTQYHAEDYVEFLSRITPDTASEHMQSMQRFNLGEDCPIFDGLFDFCKLYTGGSIDGAVR
LNHGMSDIAINWSGGLHHAKKAEASGFCYINDLVLAILELLKHHARVVYIDIDIHHGDGV
EEAFYMTDRVMCVSFHKYGDLFFPGTGGLNDIGKNAGKYYSVNVPLRDGIHDDGFQDIFQ
TVMQKVMDVYRPGAIVLQCGADSLAADRLGCFNLSLDGHADCVKFMKKFGVPLLVTGGGG
YTKSNVSRCWTNETAVLLDRKLPKDIPEHDFYYEYYADQDYKLKVEPTNYIENLNNKTYV
HEVKKEVMENLRAIEHAPGVAMHEVPPDSMIPEFDEDDLNYDERYGGQFGLDKIVDRDDE
YYDGDKDQDR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggctccctcgaaggaccgcatctgctacttctacgactcggatgtgggcacgagctac
tacgggaacaaccacccgatgaagccgcaccgactcgcgatgacccaccatctggtgctg
tcctatgacctgcaccggcggatggaggtgtaccgccctcggcgctcctacccggtcgag
atgacccagtaccacgccgaggattacgtcgagttcctttcgcgcatcacgccggacacc
gcgagtgagcacatgcagagcatgcagcggttcaacctcggcgaggattgcccgatcttc
gacgggctcttcgacttttgcaagctgtacaccggcgggagcatcgacggcgccgtgcgc
ctgaaccacgggatgagcgacatcgcgatcaactggagcggcgggttgcaccacgcgaag
aaggcggaggcttcggggttctgctacatcaacgatctcgtcctcgcgatcctcgagctc
ctcaagcatcacgcccgagtcgtgtacatagacatcgacattcaccacggagacggagtg
gaggaagccttctacatgaccgacagggtcatgtgcgtctcgttccacaagtacggcgac
ttgttcttcccgggaaccggcggcttgaacgacataggcaagaacgcgggcaagtactac
tccgtcaacgtgccgctgagggacggcatccacgacgacgggtttcaggacatcttccag
acggtgatgcagaaggtcatggacgtgtacaggccgggcgcgatcgtgctgcagtgcggc
gcggactcgttggccgcggataggctcgggtgcttcaacctgtccctggacggccacgcc
gactgcgtcaagttcatgaagaagtttggcgtgccgctgctcgtcaccgggggtggcgga
tacacgaaatccaacgtgagccggtgctggaccaacgagacggctgtgctgttggaccgc
aagctgcccaaggacatcccggagcacgacttctactacgagtactacgcggaccaggac
tacaagctcaaggttgagcccacgaactacatcgagaatctgaacaacaagacgtatgtg
cacgaggtgaagaaggaggttatggagaatttgcgagccatcgagcacgcgcccggggtg
gcgatgcacgaggtgccgccggactcgatgataccggagttcgacgaggacgatttgaac
tacgacgagaggtacggggggcagttcggtctcgacaagatcgtcgacagggacgacgag
tactacgacggggacaaggaccaagatcgctga
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integrated database retrieval system
