Micromonas commoda: MICPUN_61474
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Entry
MICPUN_61474 CDS
T02695
Name
(RefSeq) predicted protein
KO
K08503
syntaxin of plants SYP5
Organism
mis
Micromonas commoda
Pathway
mis04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
MICPUN_61474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mis04131
]
MICPUN_61474
Membrane trafficking [BR:
mis04131
]
SNARE
SNAP-25[C] (Qc)
STX8
MICPUN_61474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6285
FUSC
Motif
Other DBs
NCBI-GeneID:
8246217
NCBI-ProteinID:
XP_002504673
JGI:
MicpuN3_61474
UniProt:
C1ECM8
LinkDB
All DBs
Position
9:complement(892828..893496)
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AA seq
222 aa
AA seq
DB search
MSDQWLVGFEEVEELVDDALATIRERDGCASLGNRAEAARLTATVMTKAVTLTSKLDTLE
EDLSHAIVTERESRRREGMLRELRACFEDLQIRIGGPGSPEPVVMPVETRVDVEEELDNR
SILQLQRNLMREQDEELEELSRVVTSTKHIGLAVGEELDLHARLLDDLEDDVERSGSMIR
RAHALAKAVYENSGGGCKFFLLSSVLVAVLVSLVILIEKTKH
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccagtggctggtcgggttcgaggaggtcgaggagctggtcgacgatgcgctc
gccaccatccgagaaagggacggctgcgcgtctctcggaaaccgcgccgaagccgccagg
ctcacggcgacggtgatgacgaaggccgtcaccctcacctccaagctcgacacactcgag
gaggacctttcccacgcgatagtgacggagcgtgaatctcgtcgtcgtgagggcatgctc
agggagcttcgcgcgtgtttcgaggatctccaaattcgaattggcggcccaggttccccg
gaaccggttgtgatgccggtggagacgcgcgtggacgtcgaggaggagctcgacaaccgc
agcatcctgcagctgcagagaaatctgatgcgagagcaagacgaggagctcgaggagctt
tcgagggtggtgacgagcaccaagcacatcggactggcggtcggagaggagctcgacctt
cacgccagactgctggacgacctggaggacgacgtggagaggagcgggtccatgatccgg
cgggcacacgcactcgcaaaggcagtgtacgaaaactctggaggcgggtgtaagttcttc
cttttgtcctctgttcttgtggcggtgctggtcagtctcgtcatcctgatcgagaagacg
aaacactga
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