Micromonas commoda: MICPUN_61855
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Entry
MICPUN_61855 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14308
nuclear pore complex protein Nup54
Organism
mis
Micromonas commoda
Pathway
mis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MICPUN_61855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_61855
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MICPUN_61855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
8246732
NCBI-ProteinID:
XP_002508454
JGI:
MicpuN3_61855
UniProt:
C1FIF3
LinkDB
All DBs
Position
10:<428687..430444
Genome browser
AA seq
585 aa
AA seq
DB search
APAASGGALALGASTGASGGLFGSAASAATTASSGLFGAAPSSSGAAAASSGGFSFGAAA
PASSAGAAATGAATAPASTTAGGLFGSAPASSAPAGGLFGSAAAASSTPAAASSGGFSFG
AASAPATGAAAGDATKPAGASTPASVGGLFGGAGTAAGTTAGTAAGSAPASSSAAGGLFG
SAAATTTAAAGASAGTSLAQGTSLAQGTSLAGTSLADSKDANADLAADKPSQLTTKVGLS
AHLQALARMPSTLVPERELMAIAKAYNADPNNPDFRFRHFFHNVTEPHHRVRPPGVDELK
WRNLLEDVGGEHNAAGLWPVPGDGFKCLAERAAVQDAELANQREYLKAVQDRARDIERFR
GAQLAERVQRVAKTHAELSHRLLRVMRKLEGAEGEYHAQQGGGGSELASGKGGSYPYPRS
APAQEGLNEHERELAARLRKLQGALGKSANSLPRRVDAIAAAQRAEKAADAADGARRRPA
VGSAFSDENGGLQVANRSPGEAIVGTPKDSLGIRGDGIDDGTHAAPVDEAAAQAFDKIIA
EQQEATRHLAEILRNDMRDIAVLQRERGEEVAKAAKGRKFYQSYW
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gcgccggcggcgtccggcggcgcgctcgccctcggcgcgtcgaccggggcgtctggcggg
cttttcggctcggcggcgtcggcggcgacgacggcttcgagcggcctctttggcgcggcg
ccgtcctcctccggcgccgccgccgcctcgagcggcggcttcagcttcggcgccgccgcg
cccgcgagctccgccggcgccgccgcgaccggcgccgcgaccgcgccggcgtcgacaacc
gcgggtgggctcttcggctccgcacccgcgtcgtcggcgcccgcgggcggtctcttcggc
tcagccgccgccgcgtcgtcgacacccgcggcggcgtcgtcgggagggttcagcttcggc
gccgcgagcgcccccgcgacgggcgctgcggcgggcgacgcgaccaagccggcgggggcg
tcgactccggcgtccgtcggcggtttgtttggcggcgccgggacggcggcggggacgact
gcggggacggctgcgggttccgcccccgcgtcctcctcggcggcgggcgggctcttcggc
tccgccgccgcgacgaccacggccgccgcgggtgcctcggcgggaacttccttggcgcaa
ggaacttccttggcgcaaggaacttccttggcgggaacttccttggcggattcgaaggac
gccaacgcggacctcgcggcggacaagccgtcgcagctcaccaccaaggtgggactcagc
gcccacctgcaggcgctcgcgcgcatgccgagcaccctggttcccgagcgcgagctgatg
gccatcgccaaggcgtacaacgcggatcccaacaatccggattttcgattccggcacttt
tttcacaacgtgacggagccccaccaccgcgtcaggccccccggcgtggacgagctcaag
tggcgaaacctgctcgaggacgtcggcggcgagcacaacgcggccggcctgtggcccgtt
cccggcgacgggttcaagtgcctcgccgagcgagccgccgtgcaggacgccgagctcgcc
aaccagcgagagtacctcaaggctgtgcaggaccgagcgagggatatcgaacggttcagg
ggcgcgcagctcgccgagagggtgcagcgcgtcgcgaagacgcacgcggagctgtcgcac
cggctcctgcgcgtgatgcggaagctggagggcgccgagggcgagtaccacgcgcagcaa
gggggcgggggctcggagctcgcgtctgggaagggcgggtcctatccctaccccaggtcg
gcgccggcgcaggagggactcaacgagcacgagcgcgagctcgccgctcgcctgcgcaag
ctgcagggcgccctcggtaagagcgccaactccctgccgcgcagggtggacgccatcgcc
gcggcgcaacgggcggagaaggcggcggacgcggcggatggagccaggcggagacccgcg
gttggatctgcgttttcggatgaaaacgggggcctccaagtcgccaacaggtcgcccggg
gaggcgatcgtcggaaccccgaaggactccctgggcattaggggagacgggatcgacgac
gggacgcacgcggcgccggtggacgaggctgcggcgcaggcgtttgacaagatcatcgcg
gagcagcaggaggcgactaggcacctcgccgaaattttgcgcaacgacatgcgagacatc
gcggttctgcagcgagagcgcggagaggaagtcgccaaggctgcgaaggggaggaagttt
taccagtcgtattggtga
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