Micromonas commoda: MICPUN_62408
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Entry
MICPUN_62408 CDS
T02695
Name
(RefSeq) predicted protein
KO
K09291
nucleoprotein TPR
Organism
mis
Micromonas commoda
Pathway
mis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MICPUN_62408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_62408
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MICPUN_62408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
BST2
Motif
Other DBs
NCBI-GeneID:
8247597
NCBI-ProteinID:
XP_002504866
JGI:
MicpuN3_62408
UniProt:
C1EDV9
LinkDB
All DBs
Position
11:join(366810..366962,367190..367321,367469..373357)
Genome browser
AA seq
2057 aa
AA seq
DB search
MAAVDMQARVASLEQELATVRAQADSDAINAEHQSQAMEARYNALEAEHSEAIAERDAIK
TQLTSARDELTAAKAQSATLDVSILQLTASTERLKAELNEANASRRELAERLELKNSEIA
ERNKTAEEHLAKLVAAQEERSRVEAQLRDANNKQAAFESAKARMEQQQQLLQQHNEWLRA
ELSKKSDELLSARKAASADALEAANELERVKKEAAAAVRDLGGAKEEAARASASASRANE
ELRGARESAAAAEAHFDKELVTAKRLAELYKKQAETRGAKTTELEGVLQALRDHLSEIKE
EHARALAEAHAAREKAEKAAASSAAELDARPHSGAPASPNENALPAPTLAADGAASGRQA
GALLAMQLPDTAAAALRKENLTMTELYSKYAEAADAWRKECAERRRLQATIDGMLSELEQ
RAPMLAEQRREYERAVAAHAEMRLRLEDSTVELRRMETESRAHAADKRHHERVVKGLEAQ
SADLSRQVQLLLNEVTELKGGAPTAIAPKSIAAGDAAAVVTAELVDFRDIAELQEQNRRQ
LEVIRTLSADQEELGQRLKDEYEAEAAKLRAETAKAVEEIEGRKSKTQTMMDAVTRQRDM
YKALYASASVPGGAATADAAAMSLAAAAAASLAKTEHLALPHGSNDAETASAQLAALNAE
LREELAKQKEESAANADLLRKQADEHRGAAATAKAEAAAARAQAEFERSRYASLQESADA
ARKDVDALVEKNSQAQRLLAEHEAALRERNARLDAAEDRCARAESAARRADAERELLTRA
EQRAAEAAAKATAEKSKIEAARDAALSLKEAREREIGAERERLATELARLQKDWAAARTD
LDTERERTRTAAAAAAAAAEKAASRAAADETAAAALRDAKSDAETRATVAEEKCKILEQQ
LKKADERVRVAMQASARVTSAGGGTTGGVSIAAEAAGVVAAAEHGAAETPREMELLAAAM
RAGEDAATAREAATAAEGHAAHYRAIAEANDAAIKEMQTAFDALKTESERAKADFAAESE
ALRARASEAETSAASKWQQRAEDAEAKAALVDDARAEAAEARRLAAEAEQNAAAAEGRVA
ALAADVEEHRKQWRQAQQMYEQELLHHAEDVKKLNAEEQRRAEEAAAVEAARELARAAEV
RLAAAESKWADERGSMEKARRDAEAKTAALGSQNRLLHDQLEDALKAAKIGDGDAAGGEE
AEKSLREVIAFLRSEKEAATCQLEVVSLESSRWKREAETARHQADAARATLTELENQLGT
RGTADGEEKYASLMAKVEHLNVVQESNSTLRAELTGLKTQLADAKNAAATAAATAEQANK
EAAEAKAAAEGAAGERELLVADARRWEQRTQQLLEKYGTVDLAEHNRVKEALEKAEQSAN
DKVAAKVAELEAKEKAAQETAAQLAAVTAKAEKSTSQLEIAKKHIATYNPEKDPLPQWKQ
KQQQLRAKLAEFEATAATWEKERAEMEAKLETASAAARTALTEGAAAADEAAVAAAVAAA
SAEWEKEKAALEAQVSGGAADGAQMTKMKNIALKNKQMVTKLQEQVQQVKSQADEAASLA
AKEREKMELRLKILEQEKASLERKAAGAKSPAKSPAMSPRPSTGAGAAVAAADAGAEAAT
EEEPAEEVPEEEAAAAAVDEATAEADAEAKAKADAEAAAKAAATKAAKEKADKKKKEMEE
LRAKLAEAEKKKKELAAAKKAKAEAEAKAEAEAKAKADAEAAAKAEAEAAKAAEAAAPVE
DEGDAAEGYDAEAFLDDLISSPADAMNAEGGASEPAAPAPAAAPVNPFMRAAAGASPFGT
AAATPSPTNPFMAAGAAATPEPAKNPFMAAGKPAAAKPEPAAAAAPAGATGTTPVAKKST
AEMLAEKKKATMLQQQKSAKAKKEKEQLAKQMAERQAQMEEMRKKIAETESKKRKASGGT
PEGTPATKQLRPDAPAFTPGGPAGATTPAAAGAAGANPGGGRGAGRGKAAAGGGGRGGGA
KAATPPKSPPGAGAVGAGDDEGKKSPKAGGASAAGAGRGRGRGAKGGRGGRGGRSPGRGG
DGSGAGGGGNSFAALGE
NT seq
6174 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcgacatgcaggcgcgcgtcgcctcgctcgagcaggagctggccaccgtt
agggcccaggccgactccgacgccatcaacgccgagcatcagtcgcaggcgatggaggca
aggtacaacgctctcgaggctgagcactcggaggctatcgcggagcgcgacgccatcaaa
acgcagctgacctccgcgcgtgatgaactcaccgccgcgaaggctcagtccgccaccctg
gacgtctcgatcctccagctcacggcgtccaccgagcgactcaaggctgagctcaacgag
gcgaacgcgtcgcgaagggagctggcggagcgtctcgagctgaagaactcggagatcgcc
gagcgaaacaaaaccgcggaggagcacctcgccaagctggtcgccgctcaggaggagcgc
agccgcgtcgaggcgcagctccgcgacgccaacaacaagcaagccgcgttcgagagcgcc
aaggcgcggatggagcagcagcagcagctcctgcagcagcacaacgagtggctcagggcg
gagctctcgaagaaatctgacgagctcctgtccgcgaggaaggcggcgtccgcggatgcc
ctcgaggcggccaacgagctcgagcgcgtcaagaaggaggctgccgccgcggtcagggac
ctgggcggcgccaaggaggaagccgcgcgtgcgtccgcctcggcttcgcgagccaacgag
gaacttcggggcgccagggagtccgccgccgcggctgaagcgcacttcgacaaggagctc
gtcaccgccaagcgactcgcggagctgtacaagaaacaggcggagacgcgcggggcgaag
accaccgagctcgagggcgtcctgcaggctctgagggaccacctgtcggagatcaaggag
gaacacgcgcgagcgttggctgaggctcacgcggcgagggaaaaggcggagaaggcggcc
gcctcgtcagccgccgagctcgacgctcgcccgcactccggcgctcccgcgtccccgaac
gaaaacgcgctgccggcgccaaccttggccgcggacggcgcggcgagcggcaggcaggcg
ggcgcgcttctcgccatgcagctccccgacacagccgcggcggcgctgcgcaaggaaaac
ctgacgatgaccgagctctactccaagtacgccgaggctgccgacgcctggcgcaaggag
tgcgccgaacgacgaaggctccaggccacgatcgacgggatgctcagcgagctcgagcaa
agggcgcccatgctcgcggagcagcggcgcgagtacgagcgagccgtcgcggctcacgcc
gagatgcgccttcgactcgaggactccaccgtcgagttgagacgcatggagacggaatcc
agggcgcacgcggcggataagcggcaccacgagcgcgtggtgaagggcctcgaggcgcag
tccgcggacctctccaggcaggtgcagctcttgctcaatgaggtgacggaactgaagggg
ggcgcgccgacggcgattgcgcccaagtcgatcgccgccggcgacgccgccgcggtcgtc
accgcggagctcgtggacttccgggacatcgccgagctccaggagcagaaccggcgtcag
ctcgaggtcatccgcaccctcagcgcggaccaggaggagctcggccagaggctcaaggat
gagtacgaggctgaagccgccaagcttcgcgccgagacggccaaggcggtggaggagatc
gagggacgcaagagcaagacccagaccatgatggacgcggtgacgcgccagcgcgacatg
tacaaggcgctctacgcgtccgcgtcggttcccggcggcgcggcgacggcggatgccgcg
gctatgtcactcgcggcggcggcggcggcttcgctagccaagacggaacacctcgcgctg
ccccacgggtcgaacgacgccgagacagcgtcagcgcagctcgcggcgctcaacgcggag
ctgcgcgaggagctcgccaagcagaaggaggagtcagccgccaacgccgatttacttcgc
aagcaggcggatgagcaccgaggcgccgcagccaccgccaaggcggaggcggcggcggcc
agggcgcaggctgaattcgagcgcagtcggtacgcctccctgcaggaatccgcggacgcc
gcgaggaaggacgtggacgcgctcgtggagaagaactcgcaggcgcagagacttctcgcc
gagcacgaggctgcgctccgcgaacgaaacgctcgcctcgacgccgccgaggaccgatgc
gcccgcgccgaatccgccgcgcgacgcgccgacgccgagcgcgagctcctcacgcgcgcg
gagcagcgcgccgcggaggcggcggcgaaggccaccgcggaaaagtccaaaatcgaagcc
gcgagagacgcggcgctgtcgctcaaagaggcgagggaacgcgagattggcgccgagcgc
gaacgtctcgcgacggaactcgcgcgcctgcaaaaggactgggccgccgccaggaccgac
ctcgacacggagcgcgagcgcacgcgcaccgcggcggcggcggcggcggcggcggcggag
aaggcggcgtcgcgagccgcggcggacgaaaccgccgccgccgcgcttcgagacgccaaa
tccgacgcggagactcgcgccacggtagcggaggagaagtgcaagatcctggagcagcag
ctcaagaaggcggacgagcgcgtgcgcgtcgccatgcaggcgtcggcgcgggttacgtcc
gcgggcgggggcacgaccggcggggtgtcgattgcggcggaggcggctggggtggtcgcc
gccgccgagcacggcgccgcggagacgccgagggagatggagctcctcgccgccgccatg
cgcgcgggtgaggacgccgccaccgcgcgcgaggctgcgaccgccgcggagggccacgcc
gcccactaccgcgccatcgcggaggcgaacgacgccgccatcaaggagatgcagaccgcc
tttgacgcgctcaagacggagtcggagagggccaaggcggatttcgccgccgagtcggag
gcgctcagggctcgcgcgtccgaggctgagacctccgcggcgtccaagtggcagcagcgc
gctgaggacgccgaggcgaaggctgcgctcgtggacgacgcccgggcggaggcagcggag
gcgaggaggctggcggcggaggctgagcaaaacgccgccgccgcggagggtcgtgtcgcg
gcgctcgccgccgacgtcgaggaacaccgcaagcagtggcgccaggcgcagcagatgtac
gagcaggagctgctgcaccacgcggaggacgtcaagaagctcaacgcggaggagcagagg
cgcgcggaggaggcggcggcggtcgaggcggctcgggagctggcgagagcggcggaggtt
cgactcgccgccgccgagtcgaagtgggccgacgaacgcggatcgatggaaaaggcgagg
cgcgacgccgaggctaagaccgcggcgctgggctcccagaaccggctcctccacgaccag
ctggaggacgcgctcaaggcggccaagattggcgacggcgacgcagccggcggcgaggaa
gcggagaagtcgcttcgcgaggtgatcgcctttttgcgttccgagaaggaggcggcgacg
tgccagctcgaggttgtctcgctcgagtcgtccaggtggaagcgcgaggcggagacggct
cggcatcaggcggatgcggctcgcgccaccttgaccgaactcgagaaccagctcgggacc
cggggcacggcggacggggaggaaaagtacgcctccctgatggccaaggtggagcacctc
aacgtggtgcaggaatccaacagcaccttgcgcgcggagctcacgggactgaagacgcag
ctcgccgacgcgaagaatgccgccgcgacggcggcggcgacggcggagcaggcgaacaag
gaggcggcggaggccaaggctgcggcggagggcgccgcgggggagcgcgagctgctcgtg
gcggacgcgcggcgatgggagcagcgcacgcagcagctgctcgagaagtacgggacggtt
gacctcgccgagcacaaccgcgtcaaggaggcgctcgagaaggctgagcagtccgcgaac
gacaaggtggccgccaaggttgccgagctcgaggcgaaggagaaggcggctcaagagacc
gccgcgcagctcgcggcggtcacggccaaagccgagaaatccacgtcgcagctggagatc
gccaagaagcacatcgccacgtacaaccccgagaaggatcccctgccccagtggaagcag
aagcagcagcagcttcgcgccaagctcgccgagtttgaggccaccgccgcgacgtgggag
aaggaaagagccgagatggaggcgaagctcgagacggcctccgccgccgcgaggaccgcg
ctcaccgagggcgccgccgccgccgacgaggctgccgtcgccgccgccgtcgccgcggcg
tctgcggagtgggaaaaagagaaggcggcgctcgaggctcaggtgagcgggggcgccgcc
gacggggcacagatgacgaagatgaagaacatcgcgctgaagaacaagcagatggtgacc
aagctccaggaacaggtgcagcaggtcaagtcccaggcggacgaggccgcgtcgctcgcc
gcgaaggagagggagaagatggagctgaggctcaagattctcgagcaggagaaggcttcg
ctggagcgcaaggcggctggcgcgaaatcacccgccaagtcgccggcgatgtctccgagg
ccctcgaccggcgcgggggccgcggtcgcggccgcagacgccggcgcagaggctgccacc
gaggaggaacccgcggaggaggtaccggaggaggaagcggcggccgccgccgtcgacgaa
gcgaccgccgaggctgacgccgaggctaaggccaaggcggatgcggaagccgccgccaag
gctgcagccaccaaggcggcgaaggagaaggcggacaagaagaagaaggagatggaggaa
ctgcgcgccaagctcgcggaggctgagaagaagaagaaggagctggccgccgccaagaag
gccaaggctgaggcggaggctaaggctgaggctgaagccaaggccaaggcggatgccgaa
gccgccgccaaggctgaggctgaagccgccaaggccgcggaagccgcggcgcccgtcgag
gacgagggcgacgcggcggagggatacgacgccgaggcgttcctcgacgacctcatctcc
tcgccggccgacgcgatgaacgcggagggcggcgcctccgagcccgcggcgcccgccccc
gccgccgcgccggtcaaccctttcatgcgggcggctgccggcgcgagccccttcggaacc
gccgccgcgacgccgtcgcccaccaaccccttcatggctgccggcgccgccgcgacgccc
gagcccgccaagaaccccttcatggcggctgggaaacccgcggcggccaagcccgagccc
gccgccgccgcggctcccgccggcgcgacgggaacgacgcccgtcgccaagaaatcgact
gcggagatgctcgcggagaagaagaaggccacgatgctccagcagcagaagtccgccaag
gctaagaaggagaaggagcagctcgcgaagcagatggcggagcgccaggcgcagatggag
gagatgcgaaagaagattgccgagacggagagcaaaaagcgaaaggcttccggcgggaca
cccgaggggacacccgccacgaagcagctcaggcccgacgcccccgcgttcaccccgggc
ggcccggcgggggcgacgacccccgcggccgcgggcgccgcgggggccaaccccggcggc
ggccgcggcgccggtcgcggcaaggcggcggcgggtggcggcggccgcggcgggggcgcc
aaggctgccacgccgccaaagtctccgcccggagccggcgcggtcggagccggcgacgac
gaggggaagaagtctccaaaggctggcggcgcgtccgcggccggcgcgggccggggtcgg
ggacgcggcgcgaagggcggccggggcggacgcgggggtcgctcgccgggtcggggcggc
gacgggtcgggcgcgggtgggggtggaaactccttcgccgcgctgggcgagtga
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