Micromonas commoda: MICPUN_62622
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Entry
MICPUN_62622 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_62622
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
90S particles
Other 90S particles
MICPUN_62622
Pre-60S particles
Other pre-60S particles
MICPUN_62622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
MMS19_C
Motif
Other DBs
NCBI-GeneID:
8247700
NCBI-ProteinID:
XP_002504976
JGI:
MicpuN3_62622
UniProt:
C1EEH2
LinkDB
All DBs
Position
11:756504..760964
Genome browser
AA seq
1486 aa
AA seq
DB search
MAELEGFEIGDPVAELYERNLTSSSAESKHVTAVLEAVADILRQEGIKPSPTAVFAASLS
SLERANTEASPETSAAMLTVLGVALEHAPTGPVLSRLPHAMQVLLATGRAAQEKPVALRG
VVRCIGQLVAALRDAQDPGTNEWPHCAKAFGAISNLCVDSRPKVRKQAAASVAEALRAVR
GTSAAGPASRAFANVAVSIARAPVKAARELTSMHGASGAKAAEQRAQAAAQESLHLLVAL
KLILGELDGSAAGEVAGAVTGLLDLAEPLLTQHACDALVALFQPTGASATAAAAAAAAAA
AGNTGFGVPKAPRAAESVSSQAAATAAAAIGPLSTAAQNESTRRPTLAVSLIRAHAAAVR
RLHELDPAEAGARALPLACHELVKMLNAVHEGVAMEAGTCLASLVTKCVDTNMVREGIKA
MAAARAAGKSAPARPPPVIGVASALKASLGFRYRAAWPVSLPVVAAAFERLGAAAGAILG
GCLEALGEMGAHAEGLACRAQLTQCLAAAVKALGPEQVLAVLPLRLEEGIDAEIAAKSED
GRDVDEGMGDDDMDIGAGAELNEDGGNVAGSAGARLWLVPLLRQALKGARISYFSEEILP
VARRLGARAAQAKAAGRAFEAQRCAAGEAALWSLLPSFCRWPQDASESFPGLAPSLGSAL
SARADLRGPLTEALRRLIQQARAVVNADKHDADSDADEDVDEDEDDEDKAKAAAATAALL
EDRPDWFTAQIAEGQAATVAKYARNFLPILFNLFVAAPPERRGELSATVGCFAQITETAA
LGGFFRTVLRKLVKVTSDAEDAPDGLKEGGDTRSARRCTFMDLSLAMVPGLDNAARDLVF
KAARPAALEKDAAVQKRAYKLLAALMKPNVGPGANLGGDWLSANRDAAEESLVEGSGMCA
PAARRYRLRCVAAILPSLMEREAEKDSAEEGVAMGAQGSSFAVLLGELIVATKETNARTR
QQAFSLLVDIPRSMERKAGRAGGSGKIGGGAGGGGGMLGAWLAEGSDEDEDEDAPNAANS
DDDFEGMDDVNGEEMGVGVRKFFMTVLAGVVGATPTMQSATIMALARLLYEFSAALVSTV
PELLPAVFALMETGNREVIKAAIGFIKVAAVRLPQTDLAAQLPTLVPALLHCCDDEDGFN
RFRSKVRVVMERMVKRCGWDAVEAVTPELHSALVQHMRREEVRTERRRKASVAGSEFGGG
AKSLAGKSARTARKSAWNDEEVFSDDDGQTMRTGRGGRSTVGGGGGRGAYSMAPTSRRDA
GGGGPRSAAAAHALRAVGGARLPGAASGTEPLNLLDESAMRRHMLNQRRGGEHDDDDLGG
YKRDEGGRLVIVEEREGRKRGRDGDDEDDFDDGRSVGGKSLGGVSRRTAKTMGGFTMRSG
RSVRTNKTSRTTKSGQTVKTVKSKKGEGKHSADRYRAKKGATGDRKNGALEPYAYWPLDP
KMLNRRPSKRAKAGAGLAKVVRNTTQLGIMTGQKAKDAKRIKSSKY
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggccgagctcgaaggtttcgagattggcgacccggtggcggagctgtacgagaggaac
ctgacgtcctcgtcggcggagtcgaagcatgtgacggcggtgctcgaggcggtggccgac
atcctcaggcaagagggaatcaagccgtcgccgacggcggtgttcgcggcgtcgctgtcg
tccctggagcgggctaacacagaggcgagccccgagacgagcgcggcgatgctgactgtg
ctcggagtggctctggagcacgcccccacgggcccggtgcttagccgattaccccacgcg
atgcaggtgctcctcgccaccggtcgcgcggcgcaggagaagcccgtggcgctcaggggc
gtggttcggtgcatcggacagctggtcgccgcgctcagggacgctcaggacccgggaacg
aacgagtggccgcactgcgccaaggctttcggcgccatttccaacctgtgcgtcgactcc
aggcccaaggtgcggaagcaggcggcggcgtccgtcgccgaggcgcttcgcgcggtgagg
ggaacatccgcggcggggccggcgagccgcgcgttcgcgaacgtcgccgtatccatcgcg
cgcgcgccggtgaaggctgctcgtgagctcacgagcatgcacggcgcgtccggcgccaag
gcggcggagcagcgcgcgcaggctgcggctcaggagtccctccacctgctcgtcgcgctg
aagctcatcctcggcgagctggacgggtcagccgcgggggaggtggcgggcgcggtgacc
ggccttttggacctcgccgagcccctcctgacgcaacacgcgtgcgatgcgctcgtggcg
ctcttccagcccacgggcgcgagcgccaccgccgcagccgcagccgcagccgcagccgcg
gctggaaacaccggctttggcgtcccgaaggcaccgagggcggcggagtccgtctcgagc
caggctgccgcgacggccgcggcggcgatcggtcccctgtccaccgccgcgcagaacgag
tccacgcgccgacccaccctcgccgtgtccctcatccgcgcccacgccgccgccgttcgc
cggctgcacgagctcgacccggcggaggctggagcccgcgcgctgcccctggcgtgccac
gagctggtgaagatgctgaacgcggtgcacgagggggtggcgatggaggcgggcacctgc
ctcgcatccctcgtcaccaagtgcgtggacaccaacatggtgagggaggggatcaaggcg
atggcggcggcgagagcagcgggtaagtccgcgccggcgaggccacccccggttatcgga
gtagcgtccgcgttgaaggcgtcgctcgggttccggtaccgcgcggcgtggcccgtgtcg
ctccccgtcgtcgcagcggcgttcgagcgcctcggtgccgcggcgggtgcgatcctcggc
ggttgcctcgaggcgttgggtgagatgggcgcgcacgcggagggtctggcgtgcagagcg
cagctcacgcagtgcctcgcggctgcggtgaaggctctgggacccgagcaggtactggcg
gtgcttcccctccggctcgaggagggcatcgacgccgagatcgccgccaagtccgaggac
ggtcgcgacgtcgacgagggcatgggcgacgacgacatggacatcggcgcgggtgccgag
ctcaacgaggacgggggcaacgtcgcgggatccgcgggcgccaggctgtggctcgttccc
ctcctccgccaagcgctcaagggtgcgaggatctcctacttttccgaggagatcctgccc
gtcgcgcgacgcctcggcgcgcgagcggcgcaggcgaaggctgcgggtcgcgcgttcgag
gcgcagcggtgcgcggctggggaggctgcgctgtggagcctgctcccctccttctgccgc
tggccccaggacgcgtcggaatcgttcccgggactcgcgccgagcctcggcagcgcgctc
tcggcgcgagcggacctccgcgggcccctcaccgaggcgctccgtcgcctcattcagcag
gcgcgcgcggtggtcaacgccgacaagcacgacgccgactcggacgccgacgaggacgtc
gacgaggacgaggacgacgaggataaggcgaaggcggcggctgccaccgcggcactactg
gaggacaggcccgactggttcaccgcgcagattgcggagggtcaggcggccaccgtcgcc
aagtacgcccgcaactttcttcccatcctctttaacctcttcgtcgcggcgccacccgag
cgacgcggcgagctcagcgcgacggttgggtgctttgcgcaaatcaccgagacggctgcg
ctcggcggtttcttccgcacggtccttcgtaagctcgtcaaggtgacgtccgacgccgag
gatgcgcccgatgggctcaaggagggcggtgacacgcggtccgcgaggaggtgtaccttc
atggacctgtccctggccatggtgcccggtttggacaacgcggcgcgagatcttgtgttc
aaggctgcgcgaccagccgccctggagaaggacgccgccgtgcagaagcgcgcgtacaag
ctcctcgcggcgctcatgaaacccaacgtcggtcccggcgccaacctcggcggtgactgg
ctctccgctaacagggacgccgccgaggagtccctggtggaggggtcgggcatgtgcgca
cccgcggcgaggaggtaccgcctgcggtgcgtagccgcgatcctgcccagcctgatggaa
cgcgaggccgagaaggattcggccgaggagggtgtcgcgatgggagcccaagggtcctcc
ttcgcggtgttgctcggcgagctcatcgtggcgaccaaggagaccaacgcgcggacgcgg
cagcaggcgttcagtctcctcgtggatatcccccggagcatggagcgcaaggctggtcgc
gcgggcggttcgggcaagatcggcggaggtgccggcggcggcggcggtatgctcggcgcg
tggctcgccgagggaagcgacgaggacgaggacgaggacgcacccaatgcggcgaacagc
gacgatgatttcgagggtatggacgacgtcaacggggaggagatgggcgtgggtgtgcgc
aagtttttcatgacggttctggccggcgtggttggagccacacccacgatgcagagcgcg
acgatcatggctctcgcgcgtttgctgtatgagttcagcgctgctctcgtgtccaccgtt
ccggagctgcttcccgcggtgtttgccctcatggagaccggcaaccgcgaggtgatcaag
gctgcgattggtttcatcaaggttgcggcggttcgtctgccccagacagacctcgccgcg
caactccccacgctggtccccgcgctgctgcactgctgcgacgacgaggacgggttcaac
aggttcaggagcaaggtcagggtggtgatggagcggatggtgaagcgatgcggttgggac
gctgtcgaggctgtcacccccgagcttcactccgcgctcgtgcagcacatgcgacgcgag
gaggtgaggaccgagaggcgaaggaaggcgtccgtcgccggcagcgagttcggcggcggg
gccaagtccctcgcgggtaagtccgcccgcactgcgcgcaagtccgcttggaacgacgag
gaggtcttctccgacgacgacggtcagacgatgaggacggggcgcgggggtcgatccacg
gtgggcggcggcggcggccggggtgcctactcgatggcgccgacgtcgagaagggacgcg
ggcggcggcgggccgaggagcgcggcggcggctcacgcgcttcgtgccgttggcggtgcg
aggctacccggagccgcttcaggcaccgagcccttgaaccttctcgacgagagcgcgatg
cgccggcacatgctcaaccagcgccggggcggcgaacacgacgacgacgacctcggcggg
tacaagcgcgatgagggcggtcgcctggtcatcgtcgaggagagggagggacgaaaacgc
ggtcgcgacggcgacgacgaggatgacttcgacgatgggcgctccgtcggcggtaagtcc
ctcggcggggtgtcgcgtcgcacggccaagacgatgggcggtttcaccatgcgttcgggc
cgcagcgttcggaccaacaagacgtcccgcacgaccaagtccggccagacggtcaagacg
gtcaaatcgaagaagggcgagggcaaacacagcgcggacaggtacagggcgaagaagggc
gccacgggagacaggaagaacggcgcgctcgagccctacgcctactggccgctggatccc
aagatgctcaacaggcggccgagcaagcgagccaaggccggcgcgggcctggccaaggtt
gtgaggaacacgacccagctcggtatcatgaccggccagaaggcaaaagacgccaagagg
ataaagagttcgaagtactga
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