Micromonas commoda: MICPUN_62878
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Entry
MICPUN_62878 CDS
T02695
Name
(RefSeq) predicted protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mis03016
]
MICPUN_62878
Enzymes [BR:
mis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MICPUN_62878
Transfer RNA biogenesis [BR:
mis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MICPUN_62878
Prokaryotic type
MICPUN_62878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
8248027
NCBI-ProteinID:
XP_002509141
JGI:
MicpuN3_62878
UniProt:
C1FJS9
LinkDB
All DBs
Position
12:979782..981140
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AA seq
452 aa
AA seq
DB search
MGGGTREEDDSRPSKARRVDITPDPPCQTKHAHRAEGPAGVERSRDSAPVAPSSIMGATR
AAPRYLLRVQYDGTNFHGFQRQANARTVQGCVEDALDAFAGGGGGGGGGGGGDGADTMRS
SIVTHGSSRTDAGVHALDNTMHVDLPPRVSRREPTRALPPHEPHVVASALNHFLKKRGAP
DVAVTRCIRVDPNAFHARFSATGRTYHYRMHVSPTPPSLFERGRVWHVCSGAGDRDAAGG
GADGCHENAGHDGRWGLDVDAMRVAAAHLVGTHDFSTFRASGCQASSPVRTLWDVRVDAA
PSWPPFPASPATDSTKPDDFSKVEVTEKPDEARRRSRGKDRARAPRGRADLGAATTGFDP
ATSRPLTSGGVVVTAVGPSFLYHQVRLMVATLRAVGAGEIDPASVPALLAARTPRAVPAM
APAHGLYLGRVHYDGTREWSSLGAVPVEEGAD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgggacccgtgaggaggacgattcccgcccgtcgaaggcccgtcgcgtcgac
atcacgccggacccaccgtgccagacgaagcacgcgcaccgagcggagggtcccgccggc
gtcgagcgctcccgagattcggcacctgtagcgccgtcgtcaataatgggcgcgacacgc
gccgcgccccgctacctgctccgcgtgcagtacgacggcacgaacttccacgggttccag
cggcaggccaacgcgcggaccgtgcagggatgcgtcgaggacgccctcgacgccttcgcg
ggaggaggaggaggaggaggaggaggaggaggaggagatggcgccgacacgatgcgttca
tccatcgtgacgcacgggtcgtctcggaccgacgcgggcgtccacgcgctggacaacacg
atgcacgtggacctacctccgcgcgtttccaggcgcgagcccacgagggcgctgcccccg
cacgagccccacgtcgtcgcgtccgcgttgaaccacttcctcaagaagcgaggcgcgccg
gacgtggcggtgacgcgttgcattcgggtcgaccccaacgcgtttcacgccaggttcagc
gccaccggtcgaacctaccactaccgcatgcacgtgtcgccgacgccgccgagcctgttc
gagcgcggcagggtgtggcacgtgtgctcgggcgccggggatcgcgacgccgcggggggg
ggcgcggacgggtgccacgaaaacgccggtcacgacggtcgatggggtctcgacgtcgat
gctatgcgggtagccgcggcgcacctcgtcggtacgcacgacttcagcacgttccgcgcg
agcgggtgccaggcgtcgtcgccggtgcgcacgctgtgggacgtgcgcgtggacgcggcg
ccgtcgtggccgccgttcccggcgagcccggcgacggactcgacgaagccggatgatttc
tcaaaggtggaggtgacggagaaacccgacgaggcgcgtcgtcgttcgcggggtaaggat
cgagcgagggcgccccggggacgcgccgacctcggggcggcgacgacgggattcgacccg
gcgacctcccggccgctgacgtccggcggcgtcgtcgtcaccgccgtgggtcccagcttt
ttgtaccaccaggtgcgattgatggtggcgacgctgcgagccgtcggcgcgggggagatc
gatccggcgtcggtgccggcgctgctcgcggcgcggacgccgagggcggtgccggcgatg
gccccggcgcacgggctgtacctcggcagggtgcactacgacgggacgagggagtggtcg
tcgctgggagccgtcccggtcgaggagggcgcggactga
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