KEGG   Micromonas commoda: MICPUN_63095
Entry
MICPUN_63095      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
mis  Micromonas commoda
Pathway
mis03030  DNA replication
mis03410  Base excision repair
mis03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MICPUN_63095
   03410 Base excision repair
    MICPUN_63095
   03420 Nucleotide excision repair
    MICPUN_63095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mis03032]
    MICPUN_63095
   03400 DNA repair and recombination proteins [BR:mis03400]
    MICPUN_63095
Enzymes [BR:mis01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MICPUN_63095
DNA replication proteins [BR:mis03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    MICPUN_63095
DNA repair and recombination proteins [BR:mis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      MICPUN_63095
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2 GREB1_N
Other DBs
NCBI-GeneID: 8248165
NCBI-ProteinID: XP_002509045
JGI: MicpuN3_63095
UniProt: C1FJ68
LinkDB
Position
12:join(508924..509172,509399..516586)
AA seq 2478 aa
MGGAPAFSGNASGRSKGNMYGEAGRGKGHHAARGRGGQGDGDWKNQKSRLQMAQEEDALE
AGLGFVNFTEGDERLGWLVNVSSTTVQEAETGKEFSAVNCYFMQQDGDTFKAQVRYAPYF
LIATKPNCEHDVEAFLRRRYEGKIHDVTVLDKEDLDLKNHLSGLKQKYLKVTFATVQDLM
DVRREVLPMVKKNQSRSEAAEAYEALHQMEASAVTHQGRAHHGVSRGGEQKSTKGKRAIA
NYADAMMDIREYDVPYHMRFLIDTETRCGWWYQVKVKQGEVTMTHRKDMLARGEVKICAF
DIETTKLPLKFPDAEYDQVFMISYMLDGQGYLIINREVVSADIEDFEYSPKPEYPGPFIV
WNEPDEAALLRRWFDHMREVQPSVYVTYNGDFFDWPFVETRAEKNGMSMYLELGMRCDRK
TGECRSRSALHLDAFAWVKRDSYLPAGSHGLKAVTKAKLGYNPVEVDPEDMLPFAQEQPH
HMAAYSVSDAVSTYYLYMTYVHPFIFSLATIIPLSPDEVLRKGSGTLCEALLMVEAYRAN
IVCPNKTQSAGEKHYKGHLLESETYIGGHVECLEAGVFRADIPTKFRMNPKGYQGLLDSL
DEDLKYALYHEGKKMTPEDVENYDEVRAAIAEKLVDLRDNPVQMAKPLIYHLDVAAMYPN
IILTNRLQPPAMVTEDVCAACDFNRPGKTCLREMEWLWRGEHYAATSSDYAAIKAQLEAE
KFPPKADGTGDGRPRYWADLSYEEQAAAKKNRLKMYSQKVYKRVLDKPITESKMAGICQR
ENGFYVDTVKNFRDRRYEYKGLNKTWKGKLGDAKKSGNPIAVQEAKDMVTLFDSLQLAHK
CILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQMAKRLVDDIGKPLELDTDGIWCCLP
GTFPEEFTLKPKEGVNKKKLTISYPCSVLNRLTALQCTNDQYQTLTDKEKRTYESSSEMT
IEFEVDGPYKAMILPASKEEGILIKKRYAVFNFDGSLEELKGFEVKRRGELKLIKMFQTE
VFDEFLKGTTLEEVYEAVGKVANKWLDMLDSKGRDLTDEDLVDYISEATTMSKSLEEYGD
RKSCATTTAKRLGAFIGGDIANDKGLKAQYIITKKPAGAPTSQRAVPVTIFQAEPAVARS
FLRDWTKDSPPGDADEVPDMRELLDWDYYKTRLASAIQKIISIPAALQHVPNPCPRVTHP
DWLHKMVREKDDKFKQRKLADLFGAHDAKRELLAAKDPNAPEHDAAHTPGKKARGDELDM
EDAAGAAPGTLIGKTSGPRVQRFFRGVEDSAPGGGVPTTPETGAVAARTLPGSGPSPADG
GNVTGNVRRRNALDPVEIAREAFESLGACPDKRQDFDGWLRHHKAKWRLQRAERKRRRVQ
EADALAAAGGVTPGFGRSMTRPRTLGPGGLGAFVESRERTLATSAWQLVQIEPAAAGPGH
FTAWVLAAGTIHSVPIKVSRRLAVAMRSPDREGDLGLGGKKRVSAILPRGAKAEHVYEVK
MEESEYASGLEVMDLLANPNVVGVFERHVPLLEAAVQKIGCVASLRRDESRADGQVLEYD
LDQLEMRTTAECGYVPLAKPDASQAVRGMMRHVSLYRAGDKGKGVYALHTPATGSGVLVV
VEPGAVGNGRRNQGVREVSVPAMDRAWRAARAEVSSADGDDAATQSADGAIDWTVEYVKD
DESAGAAVSRHLQAYLEDPKGPAVCVVEAPGDSGVDVVDGSSIRREGVAGRLGAIIPALA
RLPVVHVPANAADTASMPAIGWQVNAAKTACTRLAAHGDWLAERVAISRYAHIPVGNLGQ
DWCLHTADTFFARALRDSSQLLWTGPGGVPDLGGGSGDGALSGLDDTLQTTRAEVNNPGA
YRCVCVELKAHHLAVCAIANAHLLNDLEQGALLGYEQNTVGSGKDNGDSGVRGGHEAAAA
FRTLRTLVNNWLVDATERRNPYADALLGQLRRWLLSAFSTLREPALRHLVELCMKKVFTL
LLAEVKKLGATVVHADMQTITIATGKHRLASAAAFVDGLRASLRRRELFSWLELEPSRQW
HSLLFRGPYDYGGLLASALPGAKQWSGHDTLGPDDFELDPVATRAAGVAEAAEALDMHWN
IASFLPESIREHFEVVVSEFIFRPWKRDFGGGLDDERSDDVEYVDGLDDGEGDDAEAAVP
PPLDTEGLEHEGDEALDECLLDATPPQAREAASQPGQGGQEENEPLQNARTPLVGGREAA
EAAEEERAAWLAGQVGGYFSQRILRLVGEINRVLGPGTARHLGPQHKFPTPPGAHLPKDL
RGSPALAFVKTLCAALSLDVSVEGPVSLLRKNALKLLRVPEYSPQAEFREPCVTFVMRDA
VCNYCSACADLDLCRDERLVEDANWDCASCGNPYDPQWIEGTLVAHVNERVRQAQLQDLR
CTRDRRIKVSHLAARCACGGMYGCVEDASATADDLRVMHDIARHHDFKVLRDVVEWVVRA
SPNLSHARAVLDVDTDGK
NT seq 7437 nt   +upstreamnt  +downstreamnt
atgggcggagcacccgcgttcagcggcaacgcgtccggccgctccaagggcaacatgtac
ggagaggccggaaggggtaagggccatcacgctgcacgcggccgcggcggccagggcgac
ggcgactggaagaaccagaagtctaggctgcagatggcgcaggaggaggacgccctcgag
gctgggctcggcttcgtgaacttcacggagggcgacgagaggctcggatggctggtcaac
gtttcatcgaccacggttcaggaggcggagaccggcaaggagttcagcgccgtcaactgc
tacttcatgcagcaggacggcgacacgttcaaggctcaggtccggtacgcgccctacttc
ctcatcgccaccaagcccaactgcgagcacgacgtcgaggcgtttctccgccgccggtac
gagggcaagatccacgacgtcaccgtgctcgacaaggaggacctggacctcaagaaccac
ctgagcgggctgaagcagaagtacctcaaggtgacgttcgcgacggtgcaggacctgatg
gacgtccgccgcgaagtgttgcccatggtgaaaaagaaccaaagcaggtccgaagccgcg
gaggcgtacgaagcgctgcaccagatggaggccagcgcggtgactcaccagggtcgcgcg
caccacggcgtcagtcgcggcggcgagcaaaagtccaccaagggcaagagggccatcgcc
aactacgcggacgccatgatggacatccgcgagtacgacgtcccgtaccacatgcgcttc
ctcatcgacacggagacgaggtgcgggtggtggtaccaggtcaaggtgaagcaaggggag
gtgacgatgacgcacaggaaggacatgttggcgcgcggggaggtcaagatctgcgcgttc
gacatcgagaccaccaagctgccgctcaagtttccagacgccgagtacgatcaggttttc
atgatctcgtacatgctggacgggcaggggtacctgatcatcaaccgcgaggtggtgagc
gccgacatcgaggatttcgagtacagccccaagccggagtaccccgggccgttcatcgtg
tggaacgagcccgacgaggccgccttgcttcgtcgttggttcgatcacatgcgcgaagtg
caaccctccgtctacgtcacgtacaacggcgactttttcgattggcccttcgtcgagacc
cgcgcggagaagaacggcatgagcatgtacctcgagctgggtatgaggtgcgacaggaag
acgggcgagtgccgctcgaggagcgcactgcacctcgacgccttcgcctgggtgaagcgt
gattcgtatcttcccgccgggtcccacggcttgaaagcggtgaccaaggcgaagctggga
tacaacccggtggaggttgacccggaggacatgctcccgttcgcgcaggagcagccgcac
cacatggcggcctactcggtgtccgacgcggtgtccacctactacctgtacatgacctac
gtgcacccgttcatcttctcgttggccaccatcatcccgctgtcgcccgacgaggttctg
cggaaaggctccggtaccctgtgcgaggctctcctgatggtggaggcgtatcgcgccaac
atcgtgtgcccgaacaagacgcagagcgccggggaaaagcactacaaaggccacctgctg
gagtccgagacgtacatcggcggacacgtggagtgcctcgaggctggggtcttccgggcg
gacattcccaccaagttcaggatgaaccccaagggataccagggcttgctcgactccctc
gacgaggatctcaagtacgcgctgtaccacgagggtaagaagatgacgccggaagacgtc
gagaactacgacgaggtacgcgccgccatcgccgagaagctggtggacctgagggacaac
ccggtccagatggccaagccgctcatctaccacctcgacgtcgcggcgatgtacccaaac
atcatcctcaccaaccggctccaacccccggcgatggtcaccgaggacgtgtgcgccgcg
tgtgacttcaaccggccgggtaagacctgccttcgcgagatggagtggctctggagaggc
gagcactacgccgccacgtcttccgactatgccgccatcaaggcacagctcgaggctgag
aagttcccccccaaggcggacggcacgggcgacgggcgcccgaggtactgggcggacctc
tcgtacgaggagcaggcggcggcgaagaagaaccgtcttaagatgtacagccagaaggtt
tacaagcgcgtgttggacaagccgatcaccgagagtaagatggcgggtatctgtcaacgc
gagaatggcttctatgtcgacaccgtgaagaatttccgcgaccgcaggtacgagtacaag
ggcctgaacaagacgtggaagggcaagttgggcgacgcgaagaaaagcggcaaccccatc
gcggtgcaggaggcgaaggacatggtgactcttttcgactcgctccagctggcgcacaag
tgcatcctcaactccttctacgggtacgtcatgcgcaagggtgcgcgctggtactcgatg
gagatggcgggcgtggtgacgtacacgggcgcgaagatcattcagatggccaagaggctg
gtcgacgacatcggcaagcccctggagctggacacagacggcatctggtgctgcctcccg
gggaccttccccgaggagttcacgctcaagcccaaggagggcgtgaacaagaagaagctc
accatctcctacccgtgctccgtgctcaaccgcctgaccgcgctgcagtgcacaaacgat
cagtatcagaccctcacggacaaggagaagaggacctacgagagctcctccgagatgacc
atcgagtttgaagtcgacggcccgtacaaggccatgatcctcccggcgtccaaggaggaa
gggatcctcatcaagaagcgatacgccgtgttcaacttcgacggctcgctcgaggagctc
aagggcttcgaggtgaaacgccgcggagagctcaagctcatcaagatgtttcaaaccgag
gtgtttgacgagttcctcaaggggaccacgctggaggaggtgtacgaggccgttggcaag
gttgcaaacaagtggctggacatgctcgacagcaaaggcagggacctcaccgacgaagac
ctcgtcgactacatctccgaggcgaccacgatgtccaagagcctcgaggagtacggcgac
aggaaatcgtgcgcgacgaccacggcgaagcgtctcggcgctttcatcggcggcgacatc
gccaacgataagggtctcaaggctcagtacatcatcaccaagaagcccgcgggggcgccc
acgtcgcagcgcgcggtgccggtgaccatcttccaggcggaacccgcagtggcccgatcg
ttcctccgcgattggaccaaggattccccccccggcgacgccgacgaggtccccgacatg
agggagctcctcgactgggactactacaagacccgactggcgagcgcgatccagaagatc
atcagcattcccgccgcgctgcagcacgtcccgaacccgtgccccagggtcactcacccc
gactggctccacaagatggtgcgcgagaaggatgacaagttcaagcagcgcaaactcgcc
gacctgtttggtgcgcacgacgctaagcgcgagctcctcgccgccaaggaccccaacgcg
ccggaacacgacgccgcccacacgccgggcaagaaggcgcgcggcgacgagctcgacatg
gaggacgcggccggggcggcgccgggcaccctcatcggcaagacgagcggcccgagggtc
caacgttttttccgcggcgtcgaggactccgccccgggcggcggcgtcccgaccaccccg
gagaccggcgcggtcgccgcgagaacactcccgggctctgggccgtcccccgcggacggg
ggcaacgtcaccggcaacgtccgccgccgcaacgccttggacccggtggagattgcgcgc
gaggctttcgagtcactcggcgcgtgccccgacaagcgccaagactttgacggttggctg
cgtcaccacaaggcgaagtggcgtctgcaacgcgccgagcgcaagcgacgcagggtgcaa
gaggctgacgcgctcgccgcggcgggcggggtcacccccgggtttgggcgatccatgacc
cgtccgagaaccttgggccccggcggcttgggcgcctttgtcgagtctcgcgagcgaacg
ctggcgacgtccgcgtggcagctcgtccagatcgagcccgccgcggccgggcccggtcac
ttcaccgcgtgggtcctcgccgcgggcaccatccactccgtcccgatcaaggtttcgcgc
cgcctcgccgtcgcgatgcgctcgcccgacagggagggcgacctcggcctgggcggcaag
aagcgcgtctcggctattcttcccagaggcgccaaggctgagcacgtgtacgaggtgaag
atggaggaatccgagtacgcgtccggtctcgaggtgatggacctgctcgccaaccccaac
gtcgtcggcgtctttgagaggcacgtgcctttgctcgaggcggcggtgcaaaagatcggc
tgcgtcgcgtcgctcaggcgcgacgagtctcgcgccgacggccaggtgttggagtacgac
ctcgaccagctcgagatgcgaaccaccgcggagtgcggctacgtgcctctggcgaagccg
gacgcgtcccaggcggtgaggggcatgatgcgccacgtgtctttgtaccgcgcgggtgac
aagggtaaaggcgtgtacgcgttgcacaccccggctaccgggtccggggttttggtggtg
gtggagcccggcgcggttggaaacgggcggaggaaccagggcgtccgcgaagtgtccgtc
cccgcgatggaccgcgcgtggcgcgcggcgagggccgaggtgtcatcggcggacggcgac
gacgcggcgactcaaagtgcggacggcgcaatcgattggaccgtggaatacgtcaaggat
gacgaatccgcgggcgcggcggtgtcccgtcacctccaggcgtacctcgaggatcccaag
ggacccgccgtgtgcgtcgtggaggcgcccggggactcgggcgtcgacgttgtcgacggg
tcgtcgatccggcgcgagggcgtcgccggcaggctcggcgcgatcatcccggcgctggcc
aggctccccgtggttcacgtccccgccaacgccgccgacaccgcgtccatgcccgcgatc
ggttggcaggtgaacgccgccaagacggcgtgcaccaggctcgccgcgcacggtgactgg
ctcgccgagcgcgtcgccatctcccgctacgcgcacatacccgtgggcaacctcgggcag
gactggtgcctgcacacggcggacacgtttttcgctcgcgcgcttcgcgattcttcccaa
cttttatggacggggcccggcggcgtccccgacctgggcggcgggtccggcgacggcgcg
ctgtcgggtttggacgataccctccagacgacgcgcgcggaggtgaacaacccgggcgcg
taccggtgcgtgtgcgtcgagctgaaagcgcaccacctcgccgtttgcgccatcgccaac
gcgcaccttctcaacgatctggagcagggcgccttactcgggtacgagcagaacacggtg
ggttcgggtaaggataacggcgatagcggcgtgaggggcggtcacgaggctgccgccgcg
ttcaggacgctcaggacgctcgtcaataactggctggttgacgccacggagcgaaggaac
ccgtacgcggatgcgctcctcgggcagctcaggcgatggctcctctccgcgttctccacc
cttcgcgagcccgcgctgaggcacctcgtggagctgtgcatgaagaaggtgttcaccctg
ctcctcgcggaggtgaagaagctcggggcgacggtcgtccacgcggacatgcagacgatc
accatcgcgacggggaagcaccggctcgcctctgccgcggctttcgtggacggcttgcga
gcgtcgcttcgacgccgcgagctcttctcgtggctggagctcgagccctcgcgccagtgg
cactcgctcctgtttcgagggccgtacgactacggcggtttgctcgcgtccgcgctgccc
ggcgccaagcagtggtccggccacgacaccctcggccccgacgatttcgagctcgacccc
gtggcgacgcgagccgcgggcgtcgcggaagccgccgaggcgctggacatgcactggaac
atcgccagcttcttgccggagtcgatccgcgagcacttcgaggttgtcgtgtccgagttc
atattccgaccgtggaagcgggactttggcggcggattggacgacgagcggagcgacgac
gtcgagtacgtcgacggattggacgacggcgagggggacgacgcggaggccgcggttccg
ccgccgctcgacaccgagggcttggagcacgagggcgacgaggccctcgacgagtgtctc
ctcgacgccaccccgccccaggcgcgcgaggcggccagccaacccggtcaagggggccag
gaggagaacgagcctcttcaaaacgcgcgaaccccgttggttgggggccgagaggcggcg
gaggctgccgaggaggaacgcgccgcgtggctcgccggccaggtgggcggctacttctcc
caacgcatcctccgtttggtgggcgagatcaaccgcgtgctcggcccgggaacggcgagg
cacctcgggccgcagcacaaattcccgacgccgcccggcgcgcacctgcccaaagacctc
cgcggctcacccgcgcttgcgtttgtcaagacgctctgcgcggcgctgtcgctggatgtg
agcgtggagggaccggtgtcgctgcttcgaaagaacgcgctcaagctcctccgggtcccg
gagtattcgccgcaggctgagtttcgcgagccgtgcgtcacgttcgtcatgcgcgacgcc
gtgtgcaactactgcagcgcgtgcgcggatctggacctgtgccgagacgagaggctggtg
gaggacgccaactgggattgcgcttcgtgcgggaacccgtacgatccgcagtggatcgag
ggcaccctcgtggcgcacgtcaacgagcgcgtcaggcaggcgcagctgcaggacctgcga
tgcacgcgggacaggcggatcaaggtgagtcacctcgcggcgcggtgcgcgtgcgggggt
atgtacggctgcgtggaggatgcttcggcgacggcggatgatctccgggtgatgcacgac
atcgcgaggcaccacgactttaaggtgctgcgggacgtggtggagtgggtggttcgcgcg
tcgccgaacctgtcgcacgccagagcggtgctggacgtcgatacagacggaaagtga

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