Micromonas commoda: MICPUN_63142
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Entry
MICPUN_63142 CDS
T02695
Name
(RefSeq) predicted protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
mis
Micromonas commoda
Pathway
mis03022
Basal transcription factors
mis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MICPUN_63142
09124 Replication and repair
03420 Nucleotide excision repair
MICPUN_63142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_63142
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_63142
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MICPUN_63142
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MICPUN_63142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
DUF2096_N
Motif
Other DBs
NCBI-GeneID:
8247909
NCBI-ProteinID:
XP_002509256
JGI:
MicpuN3_63142
UniProt:
C1FJ22
LinkDB
All DBs
Position
12:complement(join(426010..426571,426671..426726))
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AA seq
205 aa
AA seq
DB search
MAALTLGREVQVRARIKSIYNKRQMDFNELREYNDYLEQVEDIIFNLCEGIDVKATEAKV
DAYRKENAGEIARLNKRNEEEDRRIAEAKGSEWAPRRMSLDGSDVGDTPGPTGGAGGFGG
MFGHTPGTGGGGGGGPPRPVMAVPKPTAMPQSGGKAAHGAWDHGLDQSAEGRAKREAAIA
KACGVDMHALGMARARQEALQSIFC
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcttacgctgggccgtgaggtccaggtccgcgcacggatcaaatccatatac
aacaagcggcagatggacttcaacgagctgcgcgagtacaacgattacctcgagcaggtg
gaggacatcatcttcaacctatgcgagggcatcgatgtcaaggcgacggaggccaaggtg
gatgcctacaggaaggagaacgcgggcgagatcgcgaggctgaacaaacggaacgaagag
gaagacaggcggatcgcggaggcgaaggggagcgagtgggcgccacggaggatgtcgctg
gacggctcggacgtgggcgacacgccaggtcccacgggcggcgccggagggttcggtggc
atgttcggtcacacgccgggcacgggcggcggcggcggcggcgggccgcccaggccggtg
atggcggtgcccaagcccacggccatgccgcagagcgggggcaaggcggctcacggcgcg
tgggaccacggcctggatcagtcggcggagggacgggcgaaacgggaggcggcgatcgca
aaggcgtgtggggtggacatgcacgccctggggatggcgagggcgaggcaggaggctctc
cagagcatcttctgctga
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