KEGG   Micromonas commoda: MICPUN_63440
Entry
MICPUN_63440      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
mis  Micromonas commoda
Pathway
mis03013  Nucleocytoplasmic transport
mis03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    MICPUN_63440
   03015 mRNA surveillance pathway
    MICPUN_63440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mis03019]
    MICPUN_63440
Messenger RNA biogenesis [BR:mis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     MICPUN_63440
SSDB
Motif
Pfam: RRM_1 RRM_5
Other DBs
NCBI-GeneID: 8248599
NCBI-ProteinID: XP_002505670
JGI: MicpuN3_63440
UniProt: C1EFX8
LinkDB
Position
13:complement(186868..188112)
AA seq 414 aa
MGDHSMGSPARSDGSARSAEAPRSDPRAPEKSEARSGSPMREDGETDDETRVVRVANLTR
IVNHKHLEEIFAHYGRVERVALERFRPDKADENGGDSSNLRAGFVEYERTGDAARAMSHM
DGGQIDGKEVAVTRIRSVPRDAQRPGEHTFDRRDRDRGGGGPSRGRGGRGGDRYEPGGRG
GDRYEPGGRGRPRARQFGDYHDDRGRERGDDRGPDAARGRRDSRGPPRDYWRGGGPPPHH
HRGGGGRGGSRDAFDRRGPPRDAPPGGYHRDGRPGRGNGGGFGRRRSQSPPRRGRRSGSP
PPFGRRSQHGGGAFRNRSRSRGGRRGRSYSRSYSSRSRSRSRRSRSRSRSRSRSRSRSRS
RSRGGRGRGGRGGRGSRSPPPPAKGRRGRSPSSSTSGSKRRRAARRGSSSSSSS
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgggtgaccacagcatgggctcccctgcccgctccgacgggtccgctcgctcggccgag
gcaccgcggtccgatccgagggcgcctgaaaaatccgaggcgagatccgggtcgccgatg
cgcgaggacggcgaaaccgacgacgagacgcgcgtggtgagggtcgccaacctcactcgg
atcgtgaaccacaagcaccttgaggagatattcgcgcactacggccgcgtagagagggtc
gcgctcgagaggttcaggcccgacaaggcggacgagaacggcggggactcgtccaacctt
cgcgcgggctttgtcgaatacgagagaacgggcgacgcggcgagggcgatgtcccacatg
gacggcggccagatcgacggcaaggaggtggcggtcacccgcatccgatccgtcccgcgc
gacgcgcagcgcccgggcgagcacaccttcgaccgccgagatcgcgatcgcggcggcggc
ggcccctcacgcggcagaggcggccgcggcggcgaccggtacgagcccggcggccgcggc
ggcgaccggtacgagcccggcggccgcggcagaccccgcgcgcgccagttcggcgactac
cacgacgacaggggacgcgagcggggggacgaccgcggccccgacgccgccagggggcga
cgcgacagccgcggtcccccccgagattattggcgcggcggcggtccccctccccaccac
caccgcggcggcggcgggcgcggcgggtcgcgcgacgcgttcgaccgacgcggacccccg
cgcgatgcaccccccggtgggtaccaccgcgacggccggccgggccgcggaaacggcggc
gggttcggtcgtcggcgatcgcaatcgccgccgcggcgaggaaggagaagcggctcgccg
ccgccattcggtcgtcgttcgcaacacgggggcggggcctttcgaaaccggagccggagc
cggggcgggcgtcgcgggaggagctactcgcggtcgtactcgagccgatcgcgatcgcgg
tcgaggcgatcgaggagcaggagcaggagcaggagcaggagcaggagcaggagtcgtagt
cggagccggggcgggcggggtcgaggcggtcggggcggccgcgggagtcggtcgcctcct
ccgccggcgaaaggtcggcggggccggtcgccgtcgtcgagcaccagcgggagcaagagg
cggcgcgcggcgcgcaggggaagctcgagctcgtcgtccagctag

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