Micromonas commoda: MICPUN_63440
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Entry
MICPUN_63440 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
mis
Micromonas commoda
Pathway
mis03013
Nucleocytoplasmic transport
mis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MICPUN_63440
03015 mRNA surveillance pathway
MICPUN_63440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_63440
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MICPUN_63440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
8248599
NCBI-ProteinID:
XP_002505670
JGI:
MicpuN3_63440
UniProt:
C1EFX8
LinkDB
All DBs
Position
13:complement(186868..188112)
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AA seq
414 aa
AA seq
DB search
MGDHSMGSPARSDGSARSAEAPRSDPRAPEKSEARSGSPMREDGETDDETRVVRVANLTR
IVNHKHLEEIFAHYGRVERVALERFRPDKADENGGDSSNLRAGFVEYERTGDAARAMSHM
DGGQIDGKEVAVTRIRSVPRDAQRPGEHTFDRRDRDRGGGGPSRGRGGRGGDRYEPGGRG
GDRYEPGGRGRPRARQFGDYHDDRGRERGDDRGPDAARGRRDSRGPPRDYWRGGGPPPHH
HRGGGGRGGSRDAFDRRGPPRDAPPGGYHRDGRPGRGNGGGFGRRRSQSPPRRGRRSGSP
PPFGRRSQHGGGAFRNRSRSRGGRRGRSYSRSYSSRSRSRSRRSRSRSRSRSRSRSRSRS
RSRGGRGRGGRGGRGSRSPPPPAKGRRGRSPSSSTSGSKRRRAARRGSSSSSSS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaccacagcatgggctcccctgcccgctccgacgggtccgctcgctcggccgag
gcaccgcggtccgatccgagggcgcctgaaaaatccgaggcgagatccgggtcgccgatg
cgcgaggacggcgaaaccgacgacgagacgcgcgtggtgagggtcgccaacctcactcgg
atcgtgaaccacaagcaccttgaggagatattcgcgcactacggccgcgtagagagggtc
gcgctcgagaggttcaggcccgacaaggcggacgagaacggcggggactcgtccaacctt
cgcgcgggctttgtcgaatacgagagaacgggcgacgcggcgagggcgatgtcccacatg
gacggcggccagatcgacggcaaggaggtggcggtcacccgcatccgatccgtcccgcgc
gacgcgcagcgcccgggcgagcacaccttcgaccgccgagatcgcgatcgcggcggcggc
ggcccctcacgcggcagaggcggccgcggcggcgaccggtacgagcccggcggccgcggc
ggcgaccggtacgagcccggcggccgcggcagaccccgcgcgcgccagttcggcgactac
cacgacgacaggggacgcgagcggggggacgaccgcggccccgacgccgccagggggcga
cgcgacagccgcggtcccccccgagattattggcgcggcggcggtccccctccccaccac
caccgcggcggcggcgggcgcggcgggtcgcgcgacgcgttcgaccgacgcggacccccg
cgcgatgcaccccccggtgggtaccaccgcgacggccggccgggccgcggaaacggcggc
gggttcggtcgtcggcgatcgcaatcgccgccgcggcgaggaaggagaagcggctcgccg
ccgccattcggtcgtcgttcgcaacacgggggcggggcctttcgaaaccggagccggagc
cggggcgggcgtcgcgggaggagctactcgcggtcgtactcgagccgatcgcgatcgcgg
tcgaggcgatcgaggagcaggagcaggagcaggagcaggagcaggagcaggagtcgtagt
cggagccggggcgggcggggtcgaggcggtcggggcggccgcgggagtcggtcgcctcct
ccgccggcgaaaggtcggcggggccggtcgccgtcgtcgagcaccagcgggagcaagagg
cggcgcgcggcgcgcaggggaagctcgagctcgtcgtccagctag
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