Micromonas commoda: MICPUN_64440
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Entry
MICPUN_64440 CDS
T02695
Name
(RefSeq) predicted protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
mis
Micromonas commoda
Pathway
mis03010
Ribosome
mis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MICPUN_64440
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MICPUN_64440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mis03011
]
MICPUN_64440
04121 Ubiquitin system [BR:
mis04121
]
MICPUN_64440
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mis04147
]
MICPUN_64440
Ribosome [BR:
mis03011
]
Ribosomal proteins
Eukaryotes
Small subunit
MICPUN_64440
Archaea
MICPUN_64440
Ubiquitin system [BR:
mis04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
MICPUN_64440
Exosome [BR:
mis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MICPUN_64440
Exosomal proteins of colorectal cancer cells
MICPUN_64440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Sod_Ni
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
CID
UBL_UBAC1
Dsc3_N
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
8249463
NCBI-ProteinID:
XP_002506532
JGI:
MicpuN3_64440
UniProt:
C1EI38
LinkDB
All DBs
Position
15:complement(join(297281..297876,298050..298071))
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AA seq
205 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGHCQVPCGIFDDPAMVAEVKEACATIRKAMVQINELHAAGSSAQN
FNQMTRWVMTKEEHCGKIIKIMSEYALCQRVKPEVFSKPEDYVDALKAHHAVMQSAMKAK
QNVDVAVADALEHAVGDMSKMYLKE
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatttttgtcaagaccctcaccggcaagaccatcaccctcgaggtggagtcgtcc
gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatcccccctgaccag
cagcgcctgatcttcgcgggcaagcagctcgaggacggccgcactctcgcggactacaac
atccagaaggagtccaccctccacctcgtgctccgtctccgcggcggccactgccaggtc
ccctgcggcatcttcgacgaccccgccatggtcgccgaggtcaaggaggcgtgcgccacc
atccgcaaggcaatggttcagatcaatgagctccacgccgcggggagcagcgcgcagaac
ttcaaccagatgacgcgctgggtcatgacaaaggaggagcactgcgggaagatcatcaag
atcatgagcgagtacgcgctgtgccagagggtcaagcccgaggtcttctccaaacccgag
gactacgtcgacgccctcaaggcccaccacgcggtgatgcagtccgccatgaaggcgaag
cagaatgtggacgtggccgtcgccgacgcgctggagcacgccgtgggagacatgtccaag
atgtacctcaaggaatga
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