Micromonas commoda: MICPUN_64510
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Entry
MICPUN_64510 CDS
T02695
Name
(RefSeq) predicted protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mis
Micromonas commoda
Pathway
mis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUN_64510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_64510
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MICPUN_64510
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MICPUN_64510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Phage_Mu_Gam
DUF1192
DUF3878
Flagellin_N
Poty_PP
Osmo_CC
Motif
Other DBs
NCBI-GeneID:
8249322
NCBI-ProteinID:
XP_002506569
JGI:
MicpuN3_64510
UniProt:
C1EIA7
LinkDB
All DBs
Position
15:complement(join(443584..445503,445814..445948))
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AA seq
684 aa
AA seq
DB search
MGDKRKLQSEIDRTLKKIDEGLDVYDRIYQKVVDAESQSNKEKYEGDLKKEIKKLQRYRD
QVKQWASSNDVRDKTPLLEARKLIEGKMESFKIIEKETKTKAFSKQGLEAARERKDPREQ
ARDEAREWLNNSVDELQTQIEAFEAEIESLAETKKSKSKSSSRPPRLGHLEESMSRHHQH
IQRMELVLRLVDNEALQPEDVADLKDLVEDYIDRNQDDFEEFGDVEDMYADLELDDLAEA
VASGEVSHDVGKPAVLQKLESEEGANNKESADSSNDGAPSKALARGNANSDSSSSLVRQE
ALRKGKDGSVNDVAKPASPAPTLGSGGKKIPAPLGLSKPLASGGEVPGPSPGLQSGGPVP
GPKGREGQLGGNGGSWGAPGGGNGQPLSGQPGSGPGLQQQQSWGFGSGGDPPVFGNQSPN
QPTTQGGTSSGAAGVKFPLPKPAPGSPLLGGAQNNQGGSPAKNLPAPKFGVDPSKAGGVN
AAAQAQAQAQAAQLAGDPKPAADEDSLALDLPGGVADLADGSKHPLAVRLGGMAHEDPGV
NIRLLESAYRNLPTPEDGTWTRRRVEPPAKPPPPSYPSSTPPVLDNPALFERLDADALFF
AFYHQQGTAQQYLAARELKRANWRFHKKYATWFARQEDPKVSTEEYEQGSYIYFDFNMSA
DGGWCQRSKGDFLFEYSQLESEMN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaagcggaagctccagtcggagattgaccgcaccctcaagaagatcgacgag
ggcttggacgtctacgaccgcatctaccagaaggtggtcgacgccgagagccagagcaac
aaggagaagtatgagggcgacctcaagaaggagatcaagaagctccagcgctaccgcgat
caggtcaagcagtgggcgagcagcaacgacgtccgtgacaagacgccgctgctcgaggcg
cgcaagctgatcgaggggaagatggaatcgttcaagatcatcgagaaggagacgaagacg
aaagccttctccaagcaggggctggaggcggcgagggagaggaaggacccgcgggaacag
gcgagggacgaggcgagggagtggctgaacaactcggtggacgagctgcagacgcagatt
gaggcgtttgaagccgagatcgagtccctcgccgagacgaaaaagtccaagagcaaatcg
tccagccggccgccccggctcgggcacctcgaggagtccatgtcccgccaccaccaacac
atccagcgcatggagctagtgctccgcctggtggacaacgaggcgttgcagcccgaggac
gtcgccgacctgaaggacctcgtggaggattacatcgatcgcaaccaggacgatttcgag
gagtttggagacgtcgaggacatgtacgcggacctggagctggacgacctcgccgaggct
gtcgcgagcggcgaggtatcgcacgacgtgggcaagcccgcggtgctgcagaagctggag
tccgaggagggcgccaacaacaaagagtccgcggattcgtcaaacgacggggcaccgtcg
aaggcgttggcgcggggcaacgccaactcggactcgtcctcgtccctcgtaaggcaggag
gcgcttcgcaaggggaaggacgggtcggttaacgacgtcgccaaacccgcgtccccggct
cctacgctgggcagcggcggcaagaagatacccgcgccactcgggctgagcaagccgctc
gcgtccggcggcgaggtccccgggccgagcccggggttgcagagcggcggaccggtccca
gggccgaaggggcgggagggccaactgggcggcaacggcgggagctggggcgcgccgggg
ggcggtaacggccagcccttgagcggccagcccgggtccgggcccgggttgcagcagcag
caatcgtggggtttcggcagcggcggcgacccgccggtgtttgggaaccagtcgcccaac
caaccgacgacgcagggaggaacgtcatcaggcgctgcaggggttaagtttccgctgccc
aagcccgcgcccggatcgcccctcctcgggggtgcgcagaacaaccagggcggatcgccg
gcgaagaatcttcccgcgcccaaattcggcgtcgacccctccaaggctggcggggtgaac
gccgccgcgcaggcgcaggcgcaggcgcaggcggcacagctggcgggtgatcccaagccc
gcggctgacgaggattctctcgcgctcgacctccccggcggcgtcgcggatctcgccgac
gggagcaagcacccgctggcggtgcgcctcggcggcatggcgcacgaggacccgggcgtc
aacatccggctgctcgagagcgcgtaccgcaaccttccgacgccggaggacgggacgtgg
acgaggcggcgtgtggagccacccgccaagccgccgccgccgagctacccgtcgtcgacg
cctccggttttggataaccccgcgctcttcgagcggctcgacgcggacgctctgtttttc
gccttttaccaccagcagggcacggcgcagcagtacctcgcggcgagggagttgaaacgc
gccaactggcggtttcataagaagtacgccacgtggttcgccaggcaggaggatccgaag
gtgtccaccgaggagtacgagcaggggagttacatctacttcgactttaacatgagcgcg
gacgggggttggtgccagcggtcgaagggggattttctgttcgagtactcgcagctcgag
agcgagatgaactga
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