KEGG   Micromonas commoda: MICPUN_64702
Entry
MICPUN_64702      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K12821  pre-mRNA-processing factor 40
Organism
mis  Micromonas commoda
Pathway
mis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUN_64702
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mis03041]
    MICPUN_64702
Spliceosome [BR:mis03041]
 Complex A
  U1 snRNP components
   U1 related factors
    MICPUN_64702
 Complex B
    MICPUN_64702
SSDB
Motif
Pfam: FF WW Tubulin_2
Other DBs
NCBI-GeneID: 8249594
NCBI-ProteinID: XP_002506661
JGI: MicpuN3_64702
UniProt: C1EIU3
LinkDB
Position
16:122165..124348
AA seq 727 aa
MAGRGRAATLPAWMTAPAPPGGGAGAPPGPPSRVAPAPPAPPRRWTEHRAPDGRPYWNDG
TRSTYAKPQELMTPMERADASTRWRENRAPDGRTYYYHQDTRETRWSLPDDLRLAREAAA
LAQTAIAAAAAARSSSPAPPPPPAAAAAASAGPSAGSPKARVPRPRDPNAPPRVYADREE
AKAAFKELLEDYEIRAGAKWDETAKQIAADERFGALKTIGDKKQCFNEYQTQRAKHEREA
KRLAEKAARANFTAMLEERWREFGVEDPSLARHRPRLQDHVDAIAGAEDPRWSAVKDPRD
REDLFRSFCDALRIKLRDEKKKLRDEKVNAFKATLRAMGVDGVVDWTWRRVLDELAKDVE
TTNPDKDGDGGIRTLDRSIQLEAYEEYADELERAHARLAREEKAARLREERRRRDAFVRS
LKRARHRGSLRLRMPWRTFVERFLENDVAFVELSRNLSGSRARELYDDEQEEMELLAAED
RAAVEAAAAKAGFDIIANETTRDALMAAVRGKASLPARVTGETGGDEARDGEIDGAQPRR
VDSKEEEEEEEEEERLRVACGDAVVAAKERARRAARRKERALDDFYYLLRSRRRDVPITP
SSTWADVETALAGERAWIKCVGQPASGGGGDDGPVEGKGGNDPSNVKEKPKETYRADAEA
VFVKYVEKLGRREAQAREAMEDGEAMDEGVYDAQDDEDVAVELRRRKERDDLSDELDARG
GKRDRRR
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggcggggcgaggccgcgcggccacgcttccggcgtggatgaccgcgcccgcgccgccc
ggaggcggcgcgggcgcacccccgggcccgccatcccgggtcgcccccgcgccacccgcg
cccccgcgcaggtggaccgagcatcgcgcgccggacggcaggccctactggaacgacggc
acgcgatcgacgtacgccaagccgcaggaactcatgactccgatggagcgagctgacgcg
tcgacgcgatggagagagaaccgggcgcccgacggcaggacgtactactaccatcaagac
acgcgagagacgcgctggtccctcccggacgacctgcgcctggcgcgcgaggcggctgcg
ctggcgcaaaccgccattgctgccgccgccgcggcgagatcatcatcacccgccccacca
ccaccacccgcagccgccgccgccgcatccgcgggcccatccgcgggcagcccgaaagct
cgggtcccgagaccgcgcgaccccaacgccccgccgcgcgtctacgccgacagggaggaa
gccaaggctgcgttcaaggagctcctcgaggattacgagattcgagccggcgccaaatgg
gacgagaccgcgaagcagatcgccgccgacgaacgcttcggcgcgctcaaaacgatcggc
gacaagaagcagtgcttcaacgagtaccagacccagcgggcgaagcacgagcgcgaggcg
aagaggctagcggagaaggcggcgagggcgaacttcaccgccatgctcgaagagcgctgg
cgagaattcggcgtcgaagatccgtcgctcgcgcggcacaggcctcggttacaggaccac
gtcgacgccatcgcgggagctgaagatccccgatggagcgccgtgaaggacccgcgcgat
cgcgaggacctgttccgatccttctgcgacgcgctgcgaatcaaactcagggacgagaag
aagaaactcagggacgagaaagtgaacgcgtttaaagcgacgctgcgcgcgatgggcgtg
gacggcgtcgtggactggacgtggcgcagggtcctcgacgagctcgccaaggacgtcgaa
acgacaaaccctgataaggacggcgacggggggattcgaaccctcgaccgatcgatccag
ttggaggcgtacgaggaatacgccgacgagctcgagagggcgcacgcgcggctggcgagg
gaggagaaggcggcgcgtctgcgcgaggagcgccggcgccgcgacgcgttcgtgagatcg
ctcaagcgcgcgcgccaccgcggctcgttgcggttgcggatgccgtggcgaacgttcgtg
gagaggttcctcgagaacgacgtcgcgttcgtcgagttgtcccgtaacctctccgggtcc
cgggcccgagaattgtacgacgacgagcaggaggagatggaattgttagcggcggaggac
cgagccgccgtcgaggcggcggcggcgaaggcgggtttcgacatcatcgcgaacgagacg
acgagggatgcgctgatggcggcggtgcgcgggaaggcgtcgcttccggcgcgggtgacg
ggagagacggggggtgacgaggctcgggacggggagatcgacggggctcaacctcgacgc
gtcgactcgaaggaggaggaggaggaggaggaggaggaggagaggctgcgggtcgcgtgc
ggcgacgcggtggtggccgcgaaggaacgcgcgagacgcgcggcgcgccggaaggaacgc
gccctggacgatttctattacctgctcaggtcccggcggcgagacgtgcccatcacgccg
agctcgacgtgggcggacgtcgagaccgcgctcgcgggcgagcgcgcgtggatcaagtgc
gtcggtcaacccgcgagcggcggcggtggcgacgatggacccgttgaggggaaggggggg
aacgatccatcgaacgtcaaagagaaacccaaggagacgtaccgggcggacgccgaggcg
gtgtttgtcaagtacgtcgagaagctcggacggcgcgaggcgcaggcgagggaggcgatg
gaggacggcgaggcgatggacgagggagtgtacgacgcgcaggacgacgaggacgtcgcg
gtggagttgaggcggcggaaagagagggacgacctgagcgacgagttggacgctcggggc
gggaaacgcgatcgacggcggtga

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