Micromonas commoda: MICPUN_64827
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Entry
MICPUN_64827 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
mis
Micromonas commoda
Pathway
mis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MICPUN_64827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_64827
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
MICPUN_64827
U7-dependent histone pre-mRNA processing factors
MICPUN_64827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
8249808
NCBI-ProteinID:
XP_002506728
JGI:
MicpuN3_64827
UniProt:
C1EJ69
LinkDB
All DBs
Position
16:join(367729..367835,367950..368796)
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AA seq
317 aa
AA seq
DB search
MGGPPYQVFVGNVPYDATEERLRDMFSEVGPVHDFRLVTDRETGKLKGYGFCEYMDLATA
ESAKRNLNGREYNGRNLRVDFADAADREAFAKKAGGAGGGGGAPINYDTPIGGPHAAAGG
AQMSAAGMGQGGGMDQITNRISEMSPAQLFSVMNQLKQLIGQDQTGARQLLVQNPQLTLA
IFQAQLTLGMTKAPGAVQNGQGIPGDGAPLPGPPRPMGGYPGNPAPGYGAPPPPPPGQQG
YGMGGGVMRPGPPPGPPAVGGVAPLPPPQMSQMGGMDQQQALLQQVMSMTPEQMAMLPPD
QRQQVEMLRQLASQQMM
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgggcggacccccttaccaagtcttcgtcgggaacgtcccgtacgatgccaccgaggag
cgtctgcgagacatgttcagcgaggtcggacccgtgcacgacttcaggctcgtcaccgat
cgtgaaactggcaagctcaagggctacggcttctgcgagtacatggacctggcgaccgcg
gagagcgccaagaggaacctgaacggccgggagtacaacggcagaaacctgagggtggat
tttgcggacgccgcggatcgcgaggcgttcgccaagaaggcgggcggcgcgggggggggc
ggcggggcgccgatcaactacgacacgcccatcggcgggccacacgccgcagcgggcggg
gcgcagatgtccgccgcggggatgggtcaggggggcgggatggaccagatcacaaacagg
atctcggagatgtcgcccgcgcagctgttctcggtgatgaaccagctcaagcagctcatc
gggcaggaccaaaccggggccagacagctgctggttcagaacccgcagctcacgttggcc
atcttccaggcgcagctcacgctggggatgaccaaggcgccgggggcggttcagaacggt
cagggcatcccgggagacggcgcgcccctgccgggcccgccgcggccgatgggcggctac
ccaggcaatcccgcgcccggctacggagcccctcccccgccgccgcccggtcaacagggt
tacggcatgggcggcggcgtgatgcgtccgggtcctcccccgggaccgccggcggttggc
ggcgtggcgccgttgccgccgccgcagatgtcgcagatggggggcatggatcagcagcag
gcgctgctgcagcaggtgatgagcatgaccccggagcagatggcgatgctgccaccggat
cagaggcaacaggtggagatgctcagacagctcgcctcgcagcagatgatgtga
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