Micromonas commoda: MICPUN_65101
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Entry
MICPUN_65101 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14572
midasin
Organism
mis
Micromonas commoda
Pathway
mis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MICPUN_65101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_65101
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
MICPUN_65101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_5
AAA_3
AAA_lid_5
AAA_lid_7
AAA_7
AAA
AAA_22
AAA_16
Sigma54_activat
AAA_6
TsaE
Sigma54_activ_2
AAA_2
nSTAND3
AAA_18
AAA_14
bpMoxR
Zeta_toxin
AAA_30
NACHT
RuvB_N
AAA_28
ABC_tran
DUF815
AAA_33
RsgA_GTPase
PduV-EutP
TniB
CPT
AAA_25
IstB_IS21
T2SSE
IPT
MDN1_4th
GAF_2
Motif
Other DBs
NCBI-GeneID:
8245793
NCBI-ProteinID:
XP_002508160
JGI:
MicpuN3_65101
UniProt:
C1FFR3
LinkDB
All DBs
Position
8:complement(join(<386952..387680,387997..389124,389218..389720,390059..390389,390710..391450,391655..392402,392766..393253))
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AA seq
1556 aa
AA seq
DB search
MIRTGSAARNLRAVALALCRNKPLLLEGPAGAGKSAVLEEVASLTGNDDFVVLHLDAQTD
SKSLLGSYVVGAAPGEFKWQPGALTQAVASGRWVVIEDVDLAPFEVLAALVPLLEERRLY
VPGRGESVPAAEGFQLFGTVTVGGGRSGGAAAAGARADPLAGLVHAGRPFTLRDLLRWAR
RLERMRKTELSLIRPGKTRADSLPPKVRLAAYEEAADVLGGMLPAGVGKRRVLEAMAGCW
GLGADAAEHTDVLHKPAMQRGSGGVAVGRAVLPAGDGVSAADGSDGRWAKTGHAMRILER
VAAAVQMTEPVLLVGETGTGKTALVQQLARVTGAPLTVVNLSNQSESADFLGGFRPAGAR
HLCLPLLPRFRSVFERTFPSAANAEFMHRVTRYGEKKKWTHLLHAMRAGVERAKKKQKQK
RALPDDLIAEWRQFERELSTAERACGQAGGGPVFAFVEGALVTALKEGRWILLDEINLAP
AETLERLGGVLESAHGSVVLSERGDGAAVPRHPRFRLFGAMNPATDVGKRDLPAALKHRF
TEIYAGECESREDLALLVKQGLRDTVPGSSIEAIVDFYLAARRDAAATLLDSADQKPQYS
LRTLSRAMEYVRAAAPVYGVQRALYDGFAMSFQTLLQAPSAAALETLMVKHLLRGQPLKA
IFKAPPAPPDGTHELIEQYWVEGGDLEREDPEASGRYVVTPGVKTHLSALARAALLRRHP
ILLQGPTSSGKTSLVEYLAQRTGHRFMRINNHEHTDLQEYLGSYVTDANGNLSFQEGALV
QAVRRGYWIVLDELNLAPSDVLEALNRLLDDNRELFVPELQETITPHPHFMLFATQNPPG
ATYGGRKVLSKAFRNRFMEIHVGDIPDEELKTILNKRCAVAPSYCAKLVEVMRELQRRRQ
ASRAFAGKDGFITARDLFRWANRQSNGYEELAADGFRDMYVAAEEGALKLRLDEAAARAA
KRAEEAEKMASSAVAAADARSAKQDASDAAQLSEAMAWTPAMRRLFSLVEACMNHKEPAL
LVGETGCGKTSVCQLLALLRGQKLRILNCHQHTETGDFLGGFRPTRPTGAEADDVDGEEG
ADGVVDKKGAAPFAWEDGPLIKAMRDGDILLVDELSLAEDSVLERLNSVLEPGRTLTLPE
KGGSEVEELVAHPNFLLLATMNPGGDFGKKELSPALRNRFCEIWVGATGDASEMEQICVR
RIPEPELKPYAGHLARFWEFYREIAGRGAARAALLTRDLVAWAQFVRAAATGAGSAASGC
NRRLAPAEAFAHGAYLTLLDGLGLGLGLPEETARGLAEQCKKFLRDELPPEVSAAANPGG
DHLAAATGDGAFIDRDGIFGIAPFAIPRGSATTPKTMSFELSAPSTRRNAARLLRAMQLP
KPILLEGSPGVGKTSLVSALAKAAGHNLVRINLSEQTDMMDLLGADLPADGGAAGEFRWA
DGAFLAALKNGDWVLLDELNLAPQPVLEGLNAALDHRAEVFVPELGETFRCPPTFRVFAA
QNPVQEGGGRKGLPKSFLNRFTRVHVEPMERSDLVHITAALYPTVPRLVIERMVHF
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcaccgggagcgccgcgcggaacctccgcgcggtggcgctcgcgctgtgcagg
aacaagcccctgctcctggaaggccccgcgggcgcgggtaagagcgcggtgctcgaggag
gtggcgtcgctcacgggcaacgacgatttcgtcgtcctccacctggacgcgcagacggat
tccaagtcgttgctcggttcgtacgtcgtcggagcagcgccgggcgagttcaagtggcag
cccggggcgctgacccaggcggtggcgtcagggcggtgggtcgtcatcgaggacgtggac
ctcgcgccgttcgaggtgctcgccgcgctggttcccctcctggaggagcgaaggctctac
gtacccgggcgaggcgaatccgtgcccgccgccgaggggtttcagctcttcggcaccgtc
accgtgggtgggggaaggagcggcggcgccgccgcggcgggggcgcgcgcggatccactc
gcggggctggttcacgcgggtcgaccgttcaccctccgcgacttactccgatgggccagg
cgcctcgaacggatgcgaaagacggaactgtcgctcatccgaccgggcaagacgagggcg
gattcgctgccgccgaaggtgaggctcgccgcgtacgaggaggcggcggacgtcctaggc
gggatgctgcccgcgggggttggcaagcgtcgggtgctcgaggccatggcggggtgctgg
ggcctcggcgccgacgccgcggagcacaccgacgtcctccacaagcccgccatgcagcgg
ggctcgggcggggtcgctgtgggcagggcggtgctccccgccggcgacggcgtctccgcg
gcggacggttcggacgggcggtgggccaagacgggtcacgcgatgcggatcctggagcgc
gtcgccgcggcggttcagatgacggagccggtgctgctcgtgggtgagacgggaactggt
aagacggcgctggtgcaacagctcgcgagggtcacgggcgcgcctctcaccgtggtgaac
ctgtcgaatcagtccgagtcggcggatttcctcggcgggttcaggcccgcgggcgcgagg
cacctctgcctcccgcttctgccgaggttcaggtccgtcttcgagaggacgtttccgagc
gccgcaaacgccgagtttatgcacagggtgactcggtacggggagaagaaaaagtggacg
cacctgctgcacgcgatgcgcgcgggcgtggagagggcgaagaagaagcagaagcagaag
cgcgcgttacccgacgacctcatcgcggagtggcgacagtttgagcgcgagctatccacc
gccgagcgcgcgtgcggccaggctggcggcgggcccgtctttgcgtttgtggagggcgcg
ctggtcaccgcgctcaaggagggtcgttggatcctccttgacgagatcaacctcgctccc
gccgagactttggagcgtctgggcggcgtgcttgagtccgctcacggcagtgtggtgctg
tcggagcgcggcgacggcgcggcggtgccgaggcacccgcggttcaggctgtttggcgcc
atgaacccggcgacggatgtgggcaagagggacctgcccgcggcgctcaagcacaggttc
accgagatttacgcgggagagtgcgaatccagagaggatctcgcgctgctcgtcaagcag
ggcctgcgggataccgtgcccggaagctcgatcgaggcgatcgtcgatttttacctcgcc
gcgaggagggacgcggctgcgacgcttctcgactctgcggatcagaagccgcagtactcg
ctgcgaactctgagccgagccatggagtacgtccgagccgcggcgccggtgtatggggtg
caacgggcgctttacgacgggttcgcgatgtcgtttcagactctactgcaggcgccctcg
gcggcggcgctggagacgctcatggtgaagcacttgctcaggggacagccgctcaaggcc
atattcaaggcgcctcccgcgcctcccgacggtactcacgagctcatcgagcagtactgg
gtcgagggaggggatttggagcgcgaggatcccgaggcgtctggcagatacgtggtgact
ccgggtgttaagacgcatctctcggcgcttgcccgagccgcgcttctacgccgccacccg
atcctgctgcagggcccgacgtcgagcggtaagacgagcctcgtcgagtacctcgcgcaa
aggacggggcacaggttcatgcgcatcaacaaccacgagcacaccgacctgcaggagtac
ctcgggtcttacgtcacagacgcaaacggtaacctgtcgtttcaggagggtgcgctggtc
caggctgtgcgaaggggctactggatcgtcctcgacgagctcaacctcgcaccgtcggac
gtcctcgaggcgcttaaccgactcttggacgataatcgcgagcttttcgtgcccgagctg
caggagacgatcaccccgcacccgcactttatgctcttcgccacccagaatcccccgggc
gccacgtacggcggccgcaaggttctgtcaaaggcgtttcgaaaccgtttcatggagatc
cacgtcggcgacatccccgacgaggagctcaagacgattctcaacaaacgatgtgcggtt
gcgccgagctactgcgcgaagctcgtcgaggtcatgcgcgagctgcagcgacgcaggcag
gcctcaagagcgttcgctggcaaggacggcttcatcaccgcgcgcgatttgttcaggtgg
gcaaacaggcagagcaacggatacgaggaactcgcggcggatggcttccgggacatgtac
gtcgccgcggaggagggcgccctcaagctgaggctcgatgaggccgcggctcgtgcggca
aagagagccgaggaggctgaaaaaatggcttcgagcgcagtcgccgcggctgacgccaga
tccgcgaagcaggacgcctccgacgccgcgcaactctccgaggctatggcgtggaccccg
gcgatgcgacggctgttttcgctcgtcgaggcgtgcatgaaccacaaggagcccgctctt
ttggtcggcgagactggctgcggtaagacgtcggtgtgccagctcctcgcgcttctccgc
gggcagaagctccggattctcaactgccaccagcacacggagacgggtgactttctcggc
gggttcaggcccacgcgtcccaccggcgcggaggctgacgacgtggacggggaagaaggc
gcagatggggtcgttgacaagaagggagcggctccgttcgcgtgggaggacggtcccctc
atcaaggctatgcgcgacggcgacatcctgctggtggacgagctctcgttggcggaggat
tccgtcctggagcgtcttaactcggttctcgagccgggaaggaccctcacgctgcccgag
aagggcggtagcgaggttgaggagctcgtggcgcacccaaacttcctgctcctcgcgacg
atgaacccgggaggcgactttggcaagaaggagctctccccggcgcttcgcaaccgcttc
tgcgagatttgggtgggagcaaccggggacgcgtcggaaatggaacagatttgcgtgcgt
cgaatccccgagccggagctgaaaccgtacgcgggtcacctcgccaggttctgggagttt
taccgagagatcgcgggtcggggcgccgcgcgggccgcgctgctgacgcgcgatttggtg
gcttgggctcagtttgtgagagccgccgccactggcgccgggtccgccgcgagcggttgc
aaccgcaggttggcgcccgccgaggcgttcgcgcacggcgcgtatctcacgctcctcgac
ggcctgggcctgggcctgggtctgccggaggagacggccaggggtctcgcagagcagtgc
aagaagttcctgagagacgagcttcctcccgaggtgagcgctgccgcgaatcccggcggc
gaccacctcgccgccgcgaccggcgacggcgccttcatcgaccgcgacggcatcttcggc
atcgccccctttgccatcccccgcggctccgcgactacgccaaagacgatgagctttgag
ctgtccgccccgtccacccgtcgcaacgccgcgaggcttctccgggcgatgcaactcccg
aagccgatcctcctcgagggttcccccggtgtcggaaagaccagcctggtgtccgcgctg
gcgaaggcggcgggacataacctggttcgcatcaacctcagcgagcagacggatatgatg
gatctcctcggggcggatctacccgccgacgggggcgccgccggcgagtttcgatgggcc
gacggcgccttcctcgcggcgctcaagaacggcgactgggtcctgctggacgagctcaac
ctcgcgccgcagcccgtgctcgagggtctgaacgcggcgttggatcaccgcgcggaggtt
ttcgtgcccgagctcggagagacgtttcggtgcccgccgacttttcgggtgtttgccgcg
cagaacccggtgcaggagggaggcggccgcaagggcctgcccaaatcgttcctgaaccgg
ttcacccgcgtgcacgtggaacccatggagaggtccgacctcgtgcacatcaccgccgcg
ctctacccgacggtgcctaggctcgtcatcgagcggatggtccatttc
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