Micromonas commoda: MICPUN_65408
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Entry
MICPUN_65408 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
mis
Micromonas commoda
Pathway
mis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MICPUN_65408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_65408
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MICPUN_65408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D3
Nrap
Nrap_D4
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
8245243
NCBI-ProteinID:
XP_002503608
JGI:
MicpuN3_65408
UniProt:
C1EAI6
LinkDB
All DBs
Position
7:join(<735420..736433,736506..>737939)
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AA seq
816 aa
AA seq
DB search
TVVDVAVEVPKEFFQEKDYLDHRYHVKRMAYLQVLQQNLESADWVASSVYSTHHADVRKP
CLLVKAKKPGDVCLRVLLTIPVHTFPSARLHHEKANLRNLEIQNDERLPSPHYNHSIIED
MFMDEHIKYLRGAAETAEYYEDACILLKVWAAKRGLLGAPDGFNGFVLSMILAYLIRSGG
KLSPQMDAQQLVKGALSFLSNPATLKAGFTATGVKQNVASWRSMFPFIFVGPCGYVNIGA
RISRSAMDEFIHEAARSSSLLERGGRTAFEQVFLVSLYPAMRYDLHVHVKLDRSDNTAVG
SCEGDIVSWRNHERTIHDLVTKAISNRAKLVRVQHQPFEQDAEDETDLYTVWVGIIFDPE
HALRLVDLGPSSDNDKLAKEFRAFWGDRAELRRFKDGRICESVVWDSIPFNKRHHIPALA
TDYVLKRNFSSTETVEWSCNLLDPAMGMKESDSKESSPIALIQCLDRLAKRMKDMKEVPL
RVVNAQPISPAFRGTDPFPPRQHQLAFGAGIGLGRSDEQMPVCPKTLDVVVQLEGSGRWP
ENSMAINKTKAAMALKIAEQLRSSYATPTIVTEEATDVLHEGYVFRLHINSSASGANNEA
AEKYLIKGAAHAAVIATISARFPVYGAATQVAKRWISSHMLAPHIRDEVVELIMGYLFLH
PGAVDPPGSREVAFIRFLDLLASHPWNVLPLFVDPEDEFTLADMQNLEKKMDSSDASSMC
IATPYDTEGDLWTQRGPPGVVLKRAQALASRAAERLKVLLQGKNRMGHNLSGSFMNNLLL
GDASAWESLFTPALMHYDIVLKLRRTALPFPDQALF
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
acagttgtggatgttgccgtggaagtgccgaaagagtttttccaggagaaggactacctt
gaccacaggtaccatgtgaagaggatggcgtaccttcaggttctgcagcaaaaccttgag
agtgcagattgggtcgccagctcagtatattccactcatcatgcggacgttcgaaaacct
tgtctccttgtcaaggcgaagaaaccgggcgacgtatgtcttcgtgtgctcctcacgatc
ccagttcacacattcccgtctgcccgtttgcatcacgagaaagcaaatcttcggaacttg
gagatccagaatgatgaaaggttgccgagtcctcattataatcattcgatcattgaggac
atgttcatggatgagcacataaagtatctgcgaggtgcagcagagactgcagaatattat
gaagatgcatgcatcctcttgaaggtatgggctgcgaagcgtgggctacttggtgctcct
gatggattcaacggtttcgtgttgtctatgatcttggcttacctaattcgcagtggtgga
aaactcagcccacaaatggatgctcaacaactggtcaaaggtgcactttcatttttgtcc
aatccagcaacgctgaaggcaggctttacagccactggggtaaaacagaatgttgcttca
tggaggagtatgtttccttttattttcgtcggaccttgcggatatgtcaatattggtgca
cggatatcacgaagtgctatggacgagtttatccacgaggctgcacgttcttcctctctc
cttgaacgtggtgggaggacagctttcgagcaagtgtttctggtttcactttatcccgct
atgcgttatgaccttcacgtgcatgtcaagctcgatagaagtgacaataccgctgtagga
tcatgtgagggggatatcgtaagttggcgcaaccacgaaagaacgattcacgatttggtc
acaaaagccatcagcaaccgggcaaagttggttcgtgtacaacatcaaccatttgagcaa
gacgcagaagatgagactgacctctacacggtgtgggttggaattattttcgaccctgag
catgccttgaggttggtggatttgggcccgagctcggataatgacaagctggcaaaagag
ttccgggctttctggggagaccgagcagaacttcgcaggtttaaagatgggcgaatttgt
gaatctgtggtctgggattcaattcctttcaacaagcgtcatcatatacctgccctcgcc
actgattatgtcttgaagaggaacttttcatccacagagactgtcgagtggagctgcaat
cttttggatccagcaatgggcatgaaggagtccgactcgaaggaatcctctccaatcgca
ctgattcagtgcttggatagactggcaaagcgaatgaaagatatgaaagaggtgccactc
agagtggtcaatgctcagcccattagccctgcatttcgaggaacagatccatttccaccg
aggcagcaccaacttgccttcggtgctggcattggacttgggcgaagtgatgaacaaatg
ccggtgtgcccaaagacactcgatgttgtcgtgcagctcgaaggtagcggaaggtggcct
gaaaatagcatggcgataaacaaaaccaaggctgctatggcccttaagattgccgagcag
ctccgctctagctatgcaaccccaactatcgtaacagaggaagctactgatgtcttacac
gaagggtacgtgttccgtcttcacataaactcatccgcgagtggggcaaataatgaagct
gctgaaaaatatctgatcaagggagctgcccacgctgcagtcattgcaacaatatctgca
aggtttccggtgtatggcgcggcaacacaagtggcgaagcggtggatttcgagtcacatg
cttgcgcctcacattcgagatgaggtagttgaactaatcatgggttacttgttcttgcat
cctggtgcagtggatccgccgggttcaagggaggttgcattcattaggttcttggacttg
cttgcatcgcatccatggaacgtgttgccactttttgtagatccggaggatgaattcact
ctagcggatatgcagaatctggagaagaaaatggacagttcagatgcgtcgtcgatgtgc
atcgcgactccatatgataccgaaggtgacctgtggacgcaacgcggtccgccaggagtt
gtattgaagcgcgctcaggctcttgcttctcgagctgccgaacgcctgaaagtccttctc
caagggaagaataggatgggacacaatctttctgggtcattcatgaataatctgttgctt
ggtgatgcatcagcttgggaatctctcttcacacccgcgctcatgcattatgatatcgtg
ctgaagttacgaaggacagccttgccgtttcctgaccaagcgttgttc
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