Micromonas commoda: MICPUN_66033
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Entry
MICPUN_66033 CDS
T02695
Name
(RefSeq) predicted protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mis03016
]
MICPUN_66033
Enzymes [BR:
mis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MICPUN_66033
Transfer RNA biogenesis [BR:
mis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MICPUN_66033
Prokaryotic type
MICPUN_66033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
8242234
NCBI-ProteinID:
XP_002501045
JGI:
MicpuN3_66033
UniProt:
C1E293
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All DBs
Position
3:complement(join(1118034..1118672,1118736..1120211))
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AA seq
704 aa
AA seq
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MESAKGANTVVDDEEKAVGIECYANTASGFQAILKERYTDFIVNEIGLDGEVVHLTSLDA
AVDEEIDSREQEKRQKTIVQLSATQEEPDDHSDRQLDDGKKAPAAAAATPSETQGEGTDA
KVEQTEVAASVDFSAEIEIAVADFVKLAGPAEAERLKEFLEQPGVLLPAAEGKPAPAPLI
LASSNDKAYRTRMHVFFNSHFQLMTDTVEAPADEEASGPVKKDSKRPCLCIRVHPRKPVN
SKGGNGGQKRNRDEGGGWKGHRRWPANLPQYLEFTLCKENKDTGDAIGVLSRILHVKPRS
FGFAGTKDRRGVTSQRVTIFKVRAARMAKLRLLGMKVGNYRYVDRDLRLGDLKGNLFTLT
LRGIEEGSQLSISEAVRTLRTSGFINYFGLQRFGSHSIGTHVVGAALLRGAWEEAVDLIL
RPRDGDKPQVAMARSIFKEQGNAAAALKHMPTWCVAERSLLEGLVRAQKNDYVSAFSSIP
RTTRKMYVHAYQSYLWNRAASERVRRHGLQRVVAGDLIIDTGCQTDIDNEDGDNDWIFSN
VREVTPEEASAGVFSITDVVLPLPGSRVIYSESVQKIYEEICQSDGVQLVGFAHSVREYS
FGYLTGAYRRLVTKPDKVKFDFVRYSDPSADLAETDLARLQPVQHDTVKPAGKAEEGELL
ALRLSFSLPTASYATMAIRELMKSSSSQASHKAATLSANHIVQN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggctaagggggcaaatacagttgttgacgatgaggaaaaggccgtaggtatt
gagtgctacgcgaataccgcatcgggtttccaggctatcctcaaggagcgttacactgac
ttcatcgtgaacgagattggcctggacggcgaggtggtccacctcacgtccttggacgcg
gcggtggacgaagagatcgacagtagggagcaagaaaagaggcagaagacgattgtgcag
ctaagcgcgactcaggaagagcccgatgatcacagcgaccgacagctcgacgatggtaag
aaggcacctgcggcggcggcggcaacgccaagcgaaacgcagggcgaaggcacagatgct
aaggttgaacagactgaagttgcggcttcggtagacttctctgcagagatagagattgca
gttgctgatttcgtgaagctcgctgggcccgcggaggctgagcggctgaaggagttcctc
gagcagcccggggtcctgttacctgcggcggaggggaaacctgctcctgccccattgatt
ttggcctcaagcaacgataaggcttaccgtacgcgcatgcacgtcttttttaactcgcat
tttcaactgatgaccgacacggtcgaggcacccgctgatgaagaagcctctggtccagtg
aaaaaggattcgaagcgaccctgtctgtgtattcgagtacatcccaggaagcccgtgaac
agcaaaggcggcaacggagggcagaagcgcaatcgcgatgaaggcggtggctggaaaggc
cacaggcggtggcctgccaacctcccacaataccttgagttcaccctctgcaaagaaaac
aaggacaccggggatgcaatcggcgtcctgtcccgtattctccatgtgaaaccaaggtct
ttcgggtttgctggcaccaaggacaggcgcggcgtgacaagtcaacgagtcactattttt
aaagtacgcgctgctcgaatggctaagctgaggctacttggaatgaaggtcggcaactat
cgttacgtggatcgcgatttgcgactcggtgacttgaagggcaacttgttcacgttaacc
ctcagaggaatagaggaaggatcacagctgagtatatctgaggcagttaggacccttcgc
acgagtggtttcatcaactactttggactgcagagattcggtagccactcgattggcaca
catgtggttggtgctgccttattgcgaggtgcttgggaagaggcggttgacctcatcttg
agaccacgagacggtgacaaacctcaggtcgcgatggctaggtccatttttaaggagcaa
ggaaatgcggcagcagctctcaaacacatgccgacatggtgcgtggctgaacgcagcctc
ctcgaaggcttggtaagggcacaaaaaaatgactatgtgagcgcttttagttctatcccg
cgcacgactcgtaagatgtatgttcatgcatatcagagctacctgtggaatcgagctgcc
agtgagcgtgtacgtagacacgggctccagcgcgttgttgctggagatctcattatagac
accggttgccagacggatatcgataatgaagatggcgacaatgattggatattttcgaac
gttcgcgaagtcacgcctgaggaagcatctgcaggtgtattcagcatcacagacgtcgtg
cttcctctccctggatcacgagtgatctattcggagtccgtgcagaaaatatacgaagaa
atttgccaatcagatggggttcaactcgtagggtttgcgcactcagtaagggaatactct
tttgggtatctcacgggagcgtatcggcggttggtgaccaagccagacaaggtaaaattt
gatttcgtaaggtattcggacccaagcgcagacttagccgaaacagacttggcacgattg
caacctgtgcaacatgatacggtgaaaccggcaggcaaagctgaggaaggagagctgctg
gcccttcgattgagtttctcgttgccaacagcttcatacgcaaccatggctatccgtgaa
ctcatgaaatcgtcctcttcacaggcgtcacacaaggctgcgacgctctctgcgaaccac
atagtgcagaattag
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