Micromonas commoda: MICPUN_66672
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Entry
MICPUN_66672 CDS
T02695
Name
(RefSeq) predicted protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mis
Micromonas commoda
Pathway
mis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUN_66672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mis03041
]
MICPUN_66672
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_66672
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUN_66672
Spliceosome [BR:
mis03041
]
Complex A
U1 snRNP components
U1 related factors
MICPUN_66672
Complex B
MICPUN_66672
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
Pre-60S particles
Helicases
MICPUN_66672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Terminase_6N
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
8245632
NCBI-ProteinID:
XP_002507998
JGI:
MicpuN3_66672
UniProt:
C1FGG6
LinkDB
All DBs
Position
8:join(<974401..974466,974703..>976079)
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AA seq
481 aa
AA seq
DB search
VPPAVFANWKPSERVQALSVNQCEEIRRRMDVTVEVPPGTDEAPPPIESFEDMNLDTKIM
MDIKYKEFDKPTPIQAQAIPVICSGRDVLGCAETGSGKTAAFSIPMIQHCLQQPEIKRGD
GPFAIVMAPTRELAQQIEKEAKIFSRSSKGFKTTIVVGGTNMSEQRMDLKNGVEVCVATP
GRLIDHLHQGNTNLARVSLVILDEADRMLDMGFEPQIREVMMNLPKPHQTLLFSATMPVE
VEALAADYLNKPVKVKVGAVSVPTSNVAQHLEKLVDSQKVDRLCELLLEEKAEAEKFGGQ
LPMTVVFVERKARADEIMTLLNAEGVAAAAFHGGRSQQEREAALADFTTGRCAVLVATDV
AARGLDVKGVQHVVNLDLPRMFEDYVHRVGRTGRAGMTGRATSFYTDRDSFLVAQIKRAL
QELENGNAFAFATGKEARAKEREAAKAWREGRAGEPEQAAVGGVDIIVDDKFKHMKLSAS
S
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcccgcggtgttcgccaactggaagcccagcgagcgcgtgcaggcgctgagcgtc
aaccagtgcgaggagattcgcaggcgcatggacgtcaccgtggaggttccccccggcacg
gacgaggcccctcccccgatcgagtccttcgaggacatgaacctcgacaccaagatcatg
atggacatcaagtacaaggagttcgacaagcccacgcccatccaggcgcaggccatcccg
gtgatctgctccggccgcgacgtcctcggatgcgcggagacgggttcgggtaagaccgcg
gcgttctccatcccgatgatccagcactgcctccagcagcccgagatcaagcgcggcgac
ggacccttcgccatcgtcatggcgccgacgcgagagctcgcgcagcagattgagaaggag
gcgaagatcttcagccgatcgtcgaaggggttcaagacgacgatcgtcgtgggcgggacg
aacatgagcgagcagcgcatggacctcaagaacggcgtcgaggtgtgcgtcgccaccccg
ggtcgtctcatcgaccacctccaccagggcaacaccaacctcgcccgcgtctcgctcgtc
atcctcgacgaggctgacaggatgctcgacatgggcttcgagccgcagatccgcgaggtg
atgatgaacctccccaagccccatcagacgttgctcttctccgcgacgatgcccgtggag
gtggaggcgctcgcggcggattacctcaacaagcccgtcaaggtgaaggttggcgccgtc
tcagtccctacgtcaaacgtcgcgcagcacctcgagaagctggtggactcgcagaaggtg
gacaggctgtgcgaactgctcctcgaggagaaggcggaggcggagaagttcggcggccaa
ctgccgatgacggtggtcttcgtcgagcgcaaggcgagggcggacgagatcatgaccttg
ctcaacgcggagggggtggcggcggcggcgtttcacggaggccggtcgcagcaggagcga
gaagccgcgctggccgactttaccaccgggaggtgcgcggttctcgtcgccaccgacgtc
gccgcccgcggactcgacgtcaagggcgtgcagcacgtcgtaaacctcgacttgccccgc
atgtttgaggattacgtgcaccgcgtggggcgcaccggtcgcgccgggatgactgggcga
gcgacttcattttacacagatcgcgactccttcctcgtcgcgcagatcaagcgggcgctg
caggagctcgagaacggcaacgcgttcgcctttgccaccggcaaggaggcgcgcgcgaag
gagcgcgaggcggccaaggcttggcgcgagggacgcgcgggcgagcccgagcaggcggcg
gtgggcggcgtcgacatcatcgtcgacgacaagttcaagcacatgaagctcagcgcgtcg
agc
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integrated database retrieval system
