Micromonas commoda: MICPUN_66819
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Entry
MICPUN_66819 CDS
T02695
Name
(RefSeq) predicted protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mis
Micromonas commoda
Pathway
mis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUN_66819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mis03041
]
MICPUN_66819
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_66819
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUN_66819
Spliceosome [BR:
mis03041
]
Complex A
U1 snRNP components
U1 related factors
MICPUN_66819
Complex B
MICPUN_66819
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
Pre-60S particles
Helicases
MICPUN_66819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
8246230
NCBI-ProteinID:
XP_002504688
JGI:
MicpuN3_66819
UniProt:
C1ECQ6
LinkDB
All DBs
Position
9:complement(join(<948811..949317,949369..>950064))
Genome browser
AA seq
401 aa
AA seq
DB search
TFDAAPFSAAVKALLTAKGFTAPSKIQQHAWPVACAGRDAIAVAKTGSGKTLAFLLPILH
RMEARAATPADESSAPASSVPEPDAMVLAPTRELALQIHAEADKFGAATRAGAVAVYGGA
PLHKQKEELVAAHGRRKRGAATGTVVVATPGRLCDLMKQGSLSLRRCDFIVLDEADRMLE
MGFEPQLKEIFGELPSSESGRQTLLFTATWPKAVRKMAASYLAKDTESSEGNGDGGDGAE
LAANKAVSQRFVHATDDEKDKKMYDVLCELPEGSRVVAFANTKRRVENLAKTFWDFGFGT
VSVHGDKKQNEREAALKKFVDNQCPLMFATDVAARGLDIKGVTHVVNFDMARDVESYVHR
IGRTGRAGELGESVTFWNPDYDKECAPALCKIARDAGQEVP
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
accttcgacgcggcacccttctccgccgcggtcaaggcgcttctcaccgccaagggcttc
accgcgccctcgaagatccagcagcacgcgtggccggtggcgtgcgcgggcagagacgcc
atcgccgtcgccaagacgggcagcgggaaaacgctcgcgtttctcctccccatcctccac
cggatggaggcccgcgcggcgacgcccgccgacgaatcgtccgccccagcgtcgtccgtc
cccgagcccgacgcgatggtgctcgcgcccacgcgcgagcttgcgctgcagatccacgcc
gaagcggacaagttcggcgcggcgacgcgcgcgggcgcggtggccgtctacggcggcgcc
ccgctgcacaagcagaaggaggaactcgtcgccgcgcacggccggaggaagcggggcgcc
gcgaccggcaccgtcgtggtcgccacgccgggcaggctgtgcgacctcatgaagcaggga
tccctgagccttcggcgatgcgacttcatcgtgctcgacgaggcggatcgcatgctggag
atgggcttcgagccgcagctgaaggagatcttcggcgaactgccctcctccgagagcggc
cgccagacgctgctgttcacggcgacgtggcccaaggctgttcgcaagatggccgcgtcc
tacctcgccaaggacaccgagtccagcgaggggaacggcgacggcggagacggcgcggag
ctcgccgcgaacaaggcggtgtcgcagcggttcgtgcacgccaccgacgacgagaaggat
aagaagatgtacgacgtactgtgcgaactgccggaagggtctcgggtcgtcgcgttcgcc
aacaccaagcggagggtggagaacctggccaagacgttttgggattttggctttggaacg
gtgtcggtgcacggcgacaagaagcagaacgagcgcgaggcggcgctcaagaagttcgtg
gataaccagtgccccctgatgttcgccaccgacgtcgcggcgcgcgggctggacatcaaa
ggggtgacgcacgtggtcaactttgacatggcgagagacgtggagtcctacgtgcaccgc
atcgggcgaacgggtagggcgggcgagctgggcgagagcgtgacgttctggaacccggac
tacgacaaggagtgcgcgccggcgctatgtaagattgcgcgagacgccgggcaggaggtg
ccg
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