Micromonas commoda: MICPUN_67311
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Entry
MICPUN_67311 CDS
T02695
Name
(RefSeq) predicted protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mis
Micromonas commoda
Pathway
mis03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MICPUN_67311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_67311
03036 Chromosome and associated proteins [BR:
mis03036
]
MICPUN_67311
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MICPUN_67311
Coactivators
SAGA/TFTC/STAGA complex
MICPUN_67311
Chromosome and associated proteins [BR:
mis03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
MICPUN_67311
STAGA complex
MICPUN_67311
TFTC complex
MICPUN_67311
SAGA complex
MICPUN_67311
SLIK complex
MICPUN_67311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
TAF10
Motif
Other DBs
NCBI-GeneID:
8245094
NCBI-ProteinID:
XP_002503446
JGI:
MicpuN3_67311
UniProt:
C1E9M5
LinkDB
All DBs
Position
7:join(<134661..135101,135162..135824,135879..>135977)
Genome browser
AA seq
401 aa
AA seq
DB search
VPDASIKVIAQHVGIESLADEVARALAPDVEYRLREVIQDACKFMRHSKRTELSTDDINS
SLVMRRCEPLYGFPAGAGPIPFHEVPGHPELYIPENKILDLKDILAAKLPRPPIAVNVVP
HWLAVEGVQPLIPENPAPRPELDRTPGPPPGATGAVKPEEGTGAVVQPVVAHELSKELQL
YFDRITAVVRGGGGERGAEAPVLRAALESLATDSGLHQLLPYFTQFVQDEVATSLRNMPR
LKALVGTIEALCSNPEIHVELYLHQLMPTLITCMVAKRLSADPTDDHWTLRRYSAEVMSG
ICARFGKDYPTIQPRITRTLLRAMLDPRKPFSTHFGAIAGLAALGPRVTRLLIVPNLKAY
LEVLEPHLTREHAKRRVTSSEARRVHDALKEAIGACLHAAL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
gtccccgatgcgagcatcaaggtgatcgcgcagcacgtcggcatcgagtccttagcggac
gaggtggcgcgcgcgctggcgcccgacgtcgagtaccgattgagggaggtgatccaggac
gcgtgcaagttcatgcgccacagcaagcgcaccgagctcagcaccgacgacatcaactct
tccttggtcatgcgacggtgcgaaccgctctacggcttccccgcgggcgccggccccatc
ccgttccacgaagttcccggccacccggagctgtacatcccggagaacaagatactcgac
ctcaaggacatcctcgccgcgaagctcccgcgcccgcccatcgccgtgaacgtcgtgccg
cactggctcgcggtcgagggcgtgcaaccgctcataccggaaaatcccgcgccccgaccc
gagctcgatcgaaccccgggccccccgcccggcgcgacgggagcggtcaaaccggaagaa
ggaaccggcgcggtcgtgcaacccgtcgtcgcgcacgagctcagcaaggagctccagctg
tacttcgaccgcatcaccgccgtcgtgagggggggcgggggcgaacgcggcgccgaggct
cccgtgctcagagccgcgctcgagtccctcgccaccgatagcgggctgcaccagctcctg
ccctacttcacccagttcgtgcaggacgaggtggcgacgtcgcttcgtaacatgcccagg
ctcaaggcgctcgtggggacgatcgaggcgttgtgctccaatcccgagatccacgtggag
ctctacctgcaccagctcatgccgacgctcatcacgtgcatggtggccaagcggctcagc
gccgacccgaccgacgaccactggaccttgcggcgatactcggcggaggtcatgtccggc
atatgcgcgcggttcggtaaggactaccccacgatacagccccgcatcacccgcacgctc
ctgcgcgcgatgctcgacccgcgcaagccgttttccacgcactttggcgccattgccggc
ttagccgcgctcggccctcgggtcacgcgcctgctcatcgtcccgaacctcaaggcgtac
ctcgaggtgttggagccccacctcacgagggagcacgccaagagacgggtgacgagctca
gaggcgaggcgcgtgcacgacgcgttgaaggaggccatcggcgcgtgtctccacgcggcg
ctc
DBGET
integrated database retrieval system
