Micromonas commoda: MICPUN_67382
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Entry
MICPUN_67382 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_67382
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUN_67382
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
Pre-60S particles
Helicases
MICPUN_67382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
DUF5049
AAA_19
Motif
Other DBs
NCBI-GeneID:
8248421
NCBI-ProteinID:
XP_002505491
JGI:
MicpuN3_67382
UniProt:
C1EGB8
LinkDB
All DBs
Position
13:join(<451630..452841,453091..>453465)
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AA seq
529 aa
AA seq
DB search
RFSSLTPPLRPESMEVLAAQGFERATPVQAAAIGLLAGNKDVAVEACTGSGKTLAFVLPM
VEILARASKEQSFRKHHVGAVVVSPTRELARQIFDVAAPFMATLPDMAPPMLLVGGTDVN
EDVRAFAAAGAAALIGTPGRLDDLMLRSNAFDAKRCELLVLDEADRLLSMGFARAINAII
ARLPKQRRTGLFSATQTDEVEELARAGLRNPVRVTVRDSAAQAAANAAKASGLPANSAAA
RGKLPAQLKLLYKVCKVDERLWRLREFLKENADKKTIVYFLTCACVDYFATAMCDGAPAS
PGDDVDVVALHGKMKQSQREQALGRFAAGAGGCLLCTDVAARGLDIPGVDWVVQFDAPQD
PAAFVHRVGRTARMGRDGSALLFLSPHESSYVEFLRVRHIHLREEGSDEDAADTEAVEGG
NRLCDELRARSEKNREAMEKGVRAFVSYLRGYKEHHCRFIFRFKELELARLARSLGLLRL
PRMKEIRKAPKSSLKGFTESSVNPDAVPFEDRAREKQRQRALAEEAARR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
cggttcagctcgctcaccccgccgctccgacccgagtcgatggaggtgctcgcggcgcag
ggattcgagcgcgccaccccggtgcaggccgccgcgatcgggctgctcgcgggtaacaag
gacgtcgcggtggaggcgtgcacgggaagtggcaagaccctcgcgttcgtcctcccgatg
gtggagatcctggcgcgcgcgtccaaggagcagtcgttccgtaaacatcacgtcggcgcg
gtcgtcgtctccccgacgcgcgagctcgcgagacagatcttcgacgtcgccgcgccgttc
atggcgacgctacccgacatggcaccgcccatgctcctcgtcggaggcaccgacgtcaac
gaggacgtccgagcgttcgcggcggccggcgcggctgcgctcatcggcaccccaggtcgc
ctcgacgatctcatgctgaggtccaacgcgttcgacgccaagcgatgcgagctcctcgtc
ctcgacgaggcggacaggctcctcagcatgggtttcgccagggccatcaacgccatcatc
gcgaggctgcccaagcagcgccgcaccgggctgttcagcgccacgcagacggatgaggtt
gaggaactggcccgagcggggcttcgcaaccccgtgagggtcacggtgagggactccgcg
gcgcaggcggcggcgaacgcggcgaaagcgtcgggtctgcccgcaaactccgcggcggcg
cggggtaagctcccggcgcagctcaagctgctgtacaaggtgtgcaaggtcgacgagagg
ctctggcgtctccgagagttcctcaaggaaaacgcggacaagaagaccatcgtctacttt
ctcacctgcgcgtgcgtcgactacttcgccaccgccatgtgcgacggcgcgcccgcgtcc
cccggcgacgacgtcgacgtcgtggcgctgcacggcaagatgaagcagtcgcagcgcgag
caggcgctcggtcggttcgcggcgggcgcggggggatgtttgctgtgcaccgacgtggcg
gcgaggggtttggacatcccgggcgtcgactgggtcgtccagttcgacgcgccgcaggac
ccggcggcgttcgtgcacagggtcgggcgcaccgcgcggatgggacgggacggcagcgcg
ctgctgttcctgtcgccgcacgagtcgtcgtacgttgagtttctgagggtgcggcacata
cacctgcgggaggaggggtccgacgaggacgccgcggacacggaggctgtcgagggcggc
aaccggctctgcgacgagctccgcgccaggtccgagaagaaccgcgaggcgatggagaag
ggcgtacgcgcgtttgtctcgtacctgcgggggtacaaggagcaccactgccgcttcatc
ttcaggttcaaggaactcgagctcgcgcgcctggcccgctcgctcgggctcctacggctg
ccgcggatgaaggagattcgcaaggcgcccaagtcttcgctcaagggtttcaccgagtcg
tctgtgaacccggacgctgtgccgtttgaggacagggcgcgagagaagcagcggcagcgc
gcgctcgccgaggaggctgcgagacga
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