Micromonas commoda: MICPUN_69585
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Entry
MICPUN_69585 CDS
T02695
Name
(RefSeq) predicted protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mis03016
]
MICPUN_69585
Enzymes [BR:
mis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MICPUN_69585
Transfer RNA biogenesis [BR:
mis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MICPUN_69585
Prokaryotic type
MICPUN_69585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
SLBB_2
Motif
Other DBs
NCBI-GeneID:
8248776
NCBI-ProteinID:
XP_002505614
JGI:
MicpuN3_69585
UniProt:
C1EFK8
LinkDB
All DBs
Position
13:join(<936958..937374,937447..937776,937855..>937990)
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AA seq
294 aa
AA seq
DB search
RGKKRKIAAFLAYVGKGYQGFQRNPGARTIEDELERAIVAAGGISADNAGDFTKVQWTRA
ARTDKGVSAVGQCIALRMVLDPPGVLERINAALPEGFKIFGYKRVTGGFNAKTMCDRRRY
EYVIPTCAFDPRRCLPRREDDKEAKAFVFDEELRARVNKILGNYCGTHNFHNYTVRVDPN
DAAAMRYIISFECGEPFVIDGVEFVRTTVVGQSFMLHQIRKLIGTMLCVVRGYLAEEDQI
FALKTKESCSHEPLALDEYADDVEAFKKSHIYPHMASTEKEEGTMEAWVRMLPL
NT seq
883 nt
NT seq
+upstream
nt +downstream
nt
aggggcaagaagcgcaagatcgccgcgttcctcgcgtacgtcggcaaagggtaccagggc
ttccagcgcaaccccggcgcgagaaccatcgaggatgagctcgagagagccatcgtcgcc
gcgggcggcatctccgccgacaacgcgggcgacttcaccaaggtccaatggacccgcgcc
gcgaggacggacaagggcgtgagcgccgtgggtcagtgcatcgccctgcgcatggtgctg
gatccccccggcgtcctcgaacgcatcaacgcggcgctaccggaaggattcaagattttc
gggtacaagcgcgtcaccggcgggttcaacgcaaagaccatgtgcgaccgacgaaggtac
gaatacgtgatacccacgtgtgcgttcgacccgaggcgttgcctgccccggagggaggat
gacaaagaagcgaaggctttcgtctttgacgaggagcttcgcgcgcgcgtgaacaagatc
ctgggcaactactgcggcacccacaatttccacaactacaccgtccgcgtggacccaaac
gacgcggccgccatgaggtacatcatatccttcgagtgcggcgagcccttcgtcatcgac
ggcgtggagtttgtccgaaccacggtggttggccaatcgttcatgctccaccagattcgt
aagctcatcgggacgatgctatgcgtcgttcgcggttaccttgccgaggaggaccagatc
ttcgcgctgaaaaccaaggagagctgctcgcacgagcccctcgcgctggacgaatacgcc
gacgacgtcgaggcttttaaaaagtcccacatctatccccacatggcgtccacggagaag
gaggaaggcaccatggaagcctgggtgcgcatgctacccttga
DBGET
integrated database retrieval system
